Wall clock time and date at job start Sun Mar 7 2021 01:40:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47555 * 2 1 4 4 C 1.50706 * 109.46751 * 119.99954 * 2 1 3 5 5 C 1.34495 * 125.48963 * 210.02473 * 4 2 1 6 6 C 1.46758 * 106.36552 * 179.97438 * 5 4 2 7 7 C 1.47257 * 126.97036 * 179.97438 * 6 5 4 8 8 O 1.21628 * 119.99907 * 180.02562 * 7 6 5 9 9 N 1.34779 * 120.00266 * 0.02562 * 7 6 5 10 10 C 1.46495 * 119.99910 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.85389 * 336.19841 * 10 9 7 12 12 C 1.53784 * 113.61543 * 107.50287 * 10 9 7 13 13 C 1.53780 * 87.08370 * 89.11240 * 12 10 9 14 14 H 1.08998 * 113.69349 * 270.87478 * 13 12 10 15 15 C 1.50699 * 113.61607 * 139.97739 * 13 12 10 16 16 C 1.38218 * 119.99267 * 142.50072 * 15 13 12 17 17 C 1.38261 * 120.01678 * 180.02562 * 16 15 13 18 18 C 1.38190 * 120.01454 * 0.02562 * 17 16 15 19 19 C 1.38351 * 119.99111 * 359.97438 * 18 17 16 20 20 Br 1.89095 * 120.01318 * 179.97438 * 19 18 17 21 21 C 1.38240 * 119.99419 * 322.23614 * 15 13 12 22 22 C 1.53776 * 113.61375 * 204.99739 * 10 9 7 23 23 C 1.36331 * 106.05634 * 359.97438 * 6 5 4 24 24 C 1.51003 * 126.79241 * 180.02562 * 23 6 5 25 25 C 1.53392 * 108.25355 * 164.30495 * 24 23 6 26 26 C 1.53164 * 109.03538 * 48.48492 * 25 24 23 27 27 C 1.53131 * 109.52412 * 290.41489 * 26 25 24 28 28 N 1.35215 * 108.66562 * 0.02679 * 23 6 5 29 29 H 0.96699 * 113.99971 * 300.00713 * 1 2 3 30 30 H 1.09003 * 109.47280 * 239.99317 * 2 1 3 31 31 H 1.48506 * 109.99444 * 299.99784 * 3 2 1 32 32 H 1.48496 * 109.99965 * 61.31293 * 3 2 1 33 33 H 1.07994 * 126.82290 * 359.71529 * 5 4 2 34 34 H 0.97000 * 119.99739 * 359.97438 * 9 7 6 35 35 H 1.09001 * 113.61491 * 203.66273 * 12 10 9 36 36 H 1.08997 * 113.61216 * 334.56257 * 12 10 9 37 37 H 1.07997 * 119.99079 * 0.03141 * 16 15 13 38 38 H 1.07999 * 119.99190 * 180.02562 * 17 16 15 39 39 H 1.08003 * 120.00833 * 179.97438 * 18 17 16 40 40 H 1.08004 * 120.00656 * 359.97286 * 21 15 13 41 41 H 1.09002 * 113.61582 * 25.43039 * 22 10 9 42 42 H 1.09003 * 113.62022 * 156.25027 * 22 10 9 43 43 H 1.09004 * 109.70716 * 283.99920 * 24 23 6 44 44 H 1.09005 * 109.70470 * 44.61237 * 24 23 6 45 45 H 1.08997 * 109.54566 * 168.35208 * 25 24 23 46 46 H 1.09001 * 109.54162 * 288.52977 * 25 24 23 47 47 H 1.08996 * 109.46706 * 50.44937 * 26 25 24 48 48 H 1.09007 * 109.45755 * 170.41264 * 26 25 24 49 49 H 1.09005 * 109.59295 * 291.16620 * 27 26 25 50 50 H 1.09000 * 109.55055 * 170.81667 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 3.0854 -0.4460 1.8684 6 6 3.1547 -1.3769 3.0008 7 6 4.2327 -1.4788 3.9988 8 8 4.1600 -2.3027 4.8906 9 7 5.3000 -0.6591 3.9241 10 6 6.3727 -0.7609 4.9166 11 1 6.0397 -1.2024 5.8559 12 6 7.6655 -1.3847 4.3648 13 6 8.0918 0.0396 3.9717 14 1 7.7644 0.3354 2.9750 15 6 9.5518 0.3218 4.2159 16 6 10.2637 1.1008 3.3232 17 6 11.6034 1.3596 3.5465 18 6 12.2314 0.8391 4.6620 19 6 11.5193 0.0594 5.5559 20 35 12.3782 -0.6537 7.0821 21 6 10.1775 -0.1939 5.3355 22 6 7.1709 0.5410 5.0966 23 6 2.0187 -2.1283 2.9414 24 6 1.6143 -3.2327 3.8884 25 6 0.1214 -3.5192 3.6828 26 6 -0.1566 -3.6703 2.1842 27 6 -0.0053 -2.3107 1.4961 28 7 1.2882 -1.7248 1.8775 29 1 -0.3933 0.4418 0.7650 30 1 1.7924 -0.5139 -0.8899 31 1 1.5616 2.4678 -1.2086 32 1 1.5879 2.4586 1.2241 33 1 3.8180 0.3001 1.5983 34 1 5.3582 -0.0024 3.2126 35 1 8.2962 -1.8331 5.1324 36 1 7.5029 -2.0430 3.5114 37 1 9.7734 1.5074 2.4511 38 1 12.1592 1.9686 2.8490 39 1 13.2780 1.0410 4.8362 40 1 9.6200 -0.7986 6.0355 41 1 6.6092 1.4375 4.8340 42 1 7.6653 0.6199 6.0649 43 1 2.1938 -4.1308 3.6745 44 1 1.7899 -2.9176 4.9170 45 1 -0.1473 -4.4413 4.1982 46 1 -0.4668 -2.6932 4.0827 47 1 0.5523 -4.3768 1.7527 48 1 -1.1717 -4.0398 2.0387 49 1 -0.8124 -1.6495 1.8115 50 1 -0.0412 -2.4431 0.4148 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:44 Heat of formation + Delta-G solvation = 31.844576 kcal Electronic energy + Delta-G solvation = -32853.810161 eV Core-core repulsion = 28473.774901 eV Total energy + Delta-G solvation = -4380.035260 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 431.088 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -42.78249 -41.42829 -40.08520 -38.66994 -38.04368 -36.87626 -34.49606 -33.50842 -33.23507 -31.76155 -31.14414 -30.20501 -29.42332 -26.78675 -26.63955 -26.09279 -24.63607 -24.16676 -23.30011 -22.36180 -21.70555 -21.20088 -20.14199 -19.53631 -18.93922 -18.03110 -17.32316 -17.05693 -16.85462 -16.58013 -16.36818 -16.09598 -15.83324 -15.68830 -15.36871 -15.30573 -15.14229 -15.03240 -14.85090 -14.71782 -14.44123 -14.42378 -14.32128 -14.10779 -13.88129 -13.41931 -13.33902 -13.18170 -12.86920 -12.70951 -12.40584 -12.30409 -12.16332 -12.02638 -11.94894 -11.86046 -11.81538 -11.75874 -11.48046 -11.28374 -11.12539 -10.88742 -10.88080 -10.04045 -9.78899 -9.57504 -9.53687 -9.03151 -4.89254 0.15884 0.32063 0.67572 0.73087 1.08037 1.45911 1.69908 1.79776 2.05321 2.40598 2.55382 2.63589 3.22918 3.47962 3.51669 3.56915 3.67899 3.70307 3.77333 3.78799 3.81077 3.89583 4.02346 4.11456 4.17873 4.29508 4.30202 4.34852 4.35597 4.38905 4.47444 4.53665 4.62971 4.64564 4.73832 4.77268 4.77938 4.81120 4.81841 4.90555 4.96993 4.99862 5.01249 5.06446 5.08332 5.15918 5.18969 5.24046 5.28995 5.42941 5.58572 5.72241 5.76077 5.90502 6.04070 6.22249 6.36635 6.72500 7.40554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.057 4.057 3 Si 0.804 3.196 4 C -0.018 4.018 5 C -0.159 4.159 6 C -0.255 4.255 7 C 0.591 3.409 8 O -0.590 6.590 9 N -0.695 5.695 10 C 0.118 3.882 11 H 0.080 0.920 12 C -0.145 4.145 13 C -0.060 4.060 14 H 0.125 0.875 15 C -0.068 4.068 16 C -0.100 4.100 17 C -0.114 4.114 18 C -0.109 4.109 19 C -0.104 4.104 20 Br -0.065 7.065 21 C -0.100 4.100 22 C -0.126 4.126 23 C 0.101 3.899 24 C -0.054 4.054 25 C -0.124 4.124 26 C -0.135 4.135 27 C 0.105 3.895 28 N -0.429 5.429 29 H 0.384 0.616 30 H 0.130 0.870 31 H -0.298 1.298 32 H -0.291 1.291 33 H 0.186 0.814 34 H 0.416 0.584 35 H 0.088 0.912 36 H 0.069 0.931 37 H 0.155 0.845 38 H 0.152 0.848 39 H 0.136 0.864 40 H 0.132 0.868 41 H 0.093 0.907 42 H 0.094 0.906 43 H 0.079 0.921 44 H 0.080 0.920 45 H 0.088 0.912 46 H 0.068 0.932 47 H 0.068 0.932 48 H 0.107 0.893 49 H 0.092 0.908 50 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.191 3.610 -5.608 6.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.165 4.165 3 Si 0.707 3.293 4 C -0.127 4.127 5 C -0.182 4.182 6 C -0.264 4.264 7 C 0.382 3.618 8 O -0.472 6.472 9 N -0.346 5.346 10 C 0.012 3.988 11 H 0.098 0.902 12 C -0.183 4.183 13 C -0.078 4.078 14 H 0.143 0.857 15 C -0.068 4.068 16 C -0.118 4.118 17 C -0.133 4.133 18 C -0.129 4.129 19 C -0.183 4.183 20 Br 0.020 6.980 21 C -0.119 4.119 22 C -0.164 4.164 23 C -0.017 4.017 24 C -0.092 4.092 25 C -0.161 4.161 26 C -0.172 4.172 27 C -0.015 4.015 28 N -0.105 5.105 29 H 0.234 0.766 30 H 0.148 0.852 31 H -0.226 1.226 32 H -0.218 1.218 33 H 0.203 0.797 34 H 0.253 0.747 35 H 0.106 0.894 36 H 0.088 0.912 37 H 0.173 0.827 38 H 0.170 0.830 39 H 0.153 0.847 40 H 0.150 0.850 41 H 0.111 0.889 42 H 0.112 0.888 43 H 0.097 0.903 44 H 0.098 0.902 45 H 0.106 0.894 46 H 0.087 0.913 47 H 0.087 0.913 48 H 0.125 0.875 49 H 0.111 0.889 50 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -1.377 3.166 -5.096 6.156 hybrid contribution -1.026 -0.098 0.270 1.065 sum -2.403 3.069 -4.826 6.203 Atomic orbital electron populations 1.86566 1.18330 1.80098 1.50314 1.25070 0.83345 1.11839 0.96232 0.93528 0.89788 0.69780 0.76185 1.21000 0.96331 0.95589 0.99747 1.22019 0.98386 1.02514 0.95294 1.19954 0.97973 1.06102 1.02403 1.17565 0.81354 0.79749 0.83168 1.90746 1.80108 1.38643 1.37711 1.45259 1.19480 1.38365 1.31472 1.21769 0.86414 0.98323 0.92273 0.90186 1.23547 0.96571 0.96551 1.01675 1.21627 0.89316 0.96118 1.00784 0.85680 1.19874 0.96080 0.97029 0.93864 1.21566 0.94120 0.96611 0.99510 1.21496 0.95399 0.99469 0.96920 1.21345 1.00686 0.96612 0.94272 1.21932 0.96225 1.04312 0.95816 1.96752 1.79561 1.84780 1.36893 1.21089 0.92459 0.99951 0.98433 1.23368 0.96459 0.97061 0.99474 1.20552 0.91931 0.98252 0.90985 1.20427 0.96839 0.94671 0.97232 1.21693 0.94530 1.03403 0.96510 1.21927 1.04556 0.95520 0.95209 1.22248 0.82219 0.95398 1.01616 1.44033 1.17989 1.27279 1.21223 0.76640 0.85229 1.22578 1.21787 0.79671 0.74697 0.89350 0.91243 0.82686 0.82988 0.84652 0.85008 0.88868 0.88800 0.90305 0.90153 0.89380 0.91344 0.91322 0.87491 0.88936 0.88373 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.31 10.68 -148.98 -1.59 -0.28 16 2 C -0.06 0.24 2.99 71.24 0.21 0.46 16 3 Si 0.80 -4.70 31.11 68.60 2.13 -2.57 16 4 C -0.02 0.02 6.15 40.99 0.25 0.27 16 5 C -0.16 0.30 9.08 23.64 0.21 0.52 16 6 C -0.25 -1.19 6.28 -19.12 -0.12 -1.31 16 7 C 0.59 4.23 7.81 86.61 0.68 4.91 16 8 O -0.59 -8.87 14.94 -4.12 -0.06 -8.93 16 9 N -0.69 0.29 5.26 -443.46 -2.33 -2.04 16 10 C 0.12 -0.02 4.32 45.52 0.20 0.18 16 11 H 0.08 0.42 7.46 -2.39 -0.02 0.40 16 12 C -0.14 0.21 7.25 31.12 0.23 0.44 16 13 C -0.06 0.34 3.86 -11.01 -0.04 0.30 16 14 H 0.13 -1.24 8.09 -2.39 -0.02 -1.26 16 15 C -0.07 0.16 5.29 -19.87 -0.11 0.06 16 16 C -0.10 0.42 9.71 22.27 0.22 0.64 16 17 C -0.11 0.33 10.05 22.26 0.22 0.55 16 18 C -0.11 -0.07 9.79 22.29 0.22 0.15 16 19 C -0.10 -0.29 6.22 22.31 0.14 -0.15 16 20 Br -0.07 -0.28 33.70 -20.37 -0.69 -0.96 16 21 C -0.10 -0.09 8.34 22.29 0.19 0.09 16 22 C -0.13 0.61 7.29 31.12 0.23 0.84 16 23 C 0.10 0.50 6.57 41.69 0.27 0.77 16 24 C -0.05 -0.23 5.32 30.08 0.16 -0.07 16 25 C -0.12 0.19 5.98 30.78 0.18 0.37 16 26 C -0.13 0.52 5.92 30.69 0.18 0.71 16 27 C 0.11 -0.31 5.32 86.32 0.46 0.15 16 28 N -0.43 -0.44 3.11 -493.58 -1.54 -1.98 16 29 H 0.38 -2.51 8.63 -74.06 -0.64 -3.15 16 30 H 0.13 -0.77 7.96 -2.39 -0.02 -0.79 16 31 H -0.30 -0.45 7.11 99.48 0.71 0.26 16 32 H -0.29 -0.02 7.11 99.48 0.71 0.69 16 33 H 0.19 -1.89 6.53 -2.91 -0.02 -1.91 16 34 H 0.42 -2.92 7.83 -92.71 -0.73 -3.64 16 35 H 0.09 -0.04 6.32 -2.39 -0.02 -0.05 16 36 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 37 H 0.16 -1.50 8.05 -2.91 -0.02 -1.53 16 38 H 0.15 -1.13 8.06 -2.91 -0.02 -1.15 16 39 H 0.14 -0.15 8.06 -2.91 -0.02 -0.17 16 40 H 0.13 0.05 6.68 -2.91 -0.02 0.03 16 41 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 42 H 0.09 -0.35 7.72 -2.39 -0.02 -0.37 16 43 H 0.08 0.43 8.14 -2.39 -0.02 0.41 16 44 H 0.08 0.63 7.40 -2.38 -0.02 0.61 16 45 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 46 H 0.07 -0.10 8.12 -2.39 -0.02 -0.11 16 47 H 0.07 -0.15 8.11 -2.39 -0.02 -0.17 16 48 H 0.11 -0.80 8.14 -2.38 -0.02 -0.81 16 49 H 0.09 -0.47 7.94 -2.38 -0.02 -0.49 16 50 H 0.10 -0.31 7.70 -2.39 -0.02 -0.32 16 Total: 0.00 -20.99 417.93 -0.43 -21.43 By element: Atomic # 1 Polarization: -14.19 SS G_CDS: -0.34 Total: -14.53 kcal Atomic # 6 Polarization: 5.89 SS G_CDS: 3.98 Total: 9.86 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -3.87 Total: -4.02 kcal Atomic # 8 Polarization: -7.56 SS G_CDS: -1.65 Total: -9.22 kcal Atomic # 14 Polarization: -4.70 SS G_CDS: 2.13 Total: -2.57 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.69 Total: -0.96 kcal Total: -20.99 -0.43 -21.43 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.273 kcal (2) G-P(sol) polarization free energy of solvation -20.995 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.278 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.434 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.428 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds