Wall clock time and date at job start Sun Mar 7 2021 01:40:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47302 * 2 1 4 4 C 1.50705 * 109.47128 * 240.00095 * 2 1 3 5 5 C 1.38709 * 120.02687 * 285.02154 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00129 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.47033 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00105 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99611 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99563 * 179.97438 * 10 8 7 12 12 H 1.08996 * 112.85300 * 23.80849 * 11 10 8 13 13 C 1.53785 * 113.61194 * 155.00031 * 11 10 8 14 14 C 1.53778 * 87.08000 * 89.11865 * 13 11 10 15 15 H 1.09003 * 113.61108 * 270.88271 * 14 13 11 16 16 C 1.50701 * 113.61355 * 140.06935 * 14 13 11 17 17 C 1.38191 * 119.99656 * 119.99944 * 16 14 13 18 18 C 1.38353 * 119.99052 * 179.97438 * 17 16 14 19 19 Br 1.89096 * 120.01237 * 180.02562 * 18 17 16 20 20 C 1.38309 * 119.97586 * 0.02562 * 18 17 16 21 21 C 1.38234 * 119.99007 * 359.97438 * 20 18 17 22 22 C 1.38218 * 120.01466 * 359.72860 * 21 20 18 23 23 C 1.53780 * 113.61608 * 252.49781 * 11 10 8 24 24 C 1.38759 * 119.88822 * 179.97438 * 5 4 2 25 25 C 1.38126 * 119.94094 * 0.02562 * 24 5 4 26 26 C 1.38290 * 120.05768 * 359.97408 * 25 24 5 27 27 C 1.38164 * 120.02624 * 104.99828 * 4 2 1 28 28 H 0.96698 * 114.00095 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47395 * 120.00391 * 2 1 3 30 30 H 1.48502 * 109.99801 * 58.68203 * 3 2 1 31 31 H 1.48494 * 110.00156 * 180.02562 * 3 2 1 32 32 H 1.09001 * 109.47177 * 299.99686 * 7 6 5 33 33 H 1.09002 * 109.46778 * 59.99753 * 7 6 5 34 34 H 0.97003 * 120.00302 * 0.02562 * 10 8 7 35 35 H 1.09002 * 113.61409 * 203.66936 * 13 11 10 36 36 H 1.09006 * 113.61357 * 334.56962 * 13 11 10 37 37 H 1.08001 * 120.00825 * 0.02562 * 17 16 14 38 38 H 1.08004 * 120.00259 * 180.02562 * 20 18 17 39 39 H 1.08004 * 119.99158 * 179.97438 * 21 20 18 40 40 H 1.07999 * 119.99599 * 180.29156 * 22 21 20 41 41 H 1.08995 * 113.61697 * 25.43467 * 23 11 10 42 42 H 1.08993 * 113.61409 * 156.33992 * 23 11 10 43 43 H 1.07998 * 120.02743 * 180.02562 * 24 5 4 44 44 H 1.08005 * 119.97091 * 180.02562 * 25 24 5 45 45 H 1.07995 * 119.94278 * 180.27458 * 26 25 24 46 46 H 1.07997 * 119.97398 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.8693 -2.0940 -1.3072 6 8 1.3550 -2.8106 -0.2734 7 6 1.3220 -4.2315 -0.4219 8 6 0.7243 -4.8521 0.8146 9 8 0.3627 -4.1470 1.7327 10 7 0.5916 -6.1905 0.8999 11 6 0.0111 -6.7938 2.1022 12 1 -0.6317 -6.1067 2.6524 13 6 -0.6285 -8.1700 1.8534 14 6 0.7524 -8.7780 2.1505 15 1 1.3870 -8.8715 1.2692 16 6 0.6918 -10.0444 2.9651 17 6 1.2030 -11.2212 2.4518 18 6 1.1478 -12.3836 3.2000 19 35 1.8477 -13.9941 2.4984 20 6 0.5805 -12.3673 4.4613 21 6 0.0694 -11.1897 4.9739 22 6 0.1303 -10.0272 4.2286 23 6 1.0398 -7.5191 2.9857 24 6 2.3321 -2.7451 -2.4417 25 6 2.8538 -2.0144 -3.4914 26 6 2.9146 -0.6351 -3.4125 27 6 2.4537 0.0160 -2.2834 28 1 -0.3933 -0.8834 -0.0004 29 1 1.7924 -0.5139 0.8899 30 1 1.5355 2.4771 1.1922 31 1 3.5349 1.7701 -0.0006 32 1 0.7154 -4.4922 -1.2892 33 1 2.3361 -4.6058 -0.5620 34 1 0.8812 -6.7545 0.1657 35 1 -1.3899 -8.4366 2.5864 36 1 -0.9589 -8.3185 0.8252 37 1 1.6463 -11.2333 1.4670 38 1 0.5375 -13.2744 5.0459 39 1 -0.3739 -11.1770 5.9586 40 1 -0.2648 -9.1063 4.6313 41 1 2.0561 -7.1421 2.8718 42 1 0.7345 -7.6078 4.0282 43 1 2.2845 -3.8222 -2.5040 44 1 3.2139 -2.5207 -4.3749 45 1 3.3188 -0.0653 -4.2361 46 1 2.5023 1.0932 -2.2241 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:52 Heat of formation + Delta-G solvation = -18.125614 kcal Electronic energy + Delta-G solvation = -29878.982529 eV Core-core repulsion = 25554.599356 eV Total energy + Delta-G solvation = -4324.383173 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.93730 -41.46751 -40.42091 -39.13341 -38.30598 -37.31626 -34.86959 -33.26737 -32.75368 -32.28382 -31.31455 -30.25044 -29.47599 -26.95342 -26.58615 -26.33941 -23.91879 -23.61878 -22.69352 -22.59688 -21.89921 -20.28782 -19.48484 -18.61318 -18.14417 -18.05584 -17.60328 -17.38490 -16.95838 -16.66300 -16.51110 -16.32230 -15.78335 -15.57977 -15.45521 -15.32690 -15.13001 -14.84915 -14.65220 -14.59623 -14.42483 -14.06856 -13.86924 -13.72246 -13.61933 -13.38290 -13.06372 -12.78998 -12.59412 -12.48888 -12.31094 -12.13775 -12.10350 -11.90360 -11.67047 -11.50491 -11.24128 -11.16548 -11.04515 -10.91624 -10.31277 -9.99908 -9.96769 -9.70669 -9.29431 -4.79698 -0.00961 0.15588 0.18763 0.32897 0.59796 1.27732 1.34076 1.51965 1.74218 2.12342 2.39758 2.44528 2.64048 3.20157 3.31374 3.40363 3.46841 3.58120 3.65880 3.71116 3.74220 3.75879 3.79643 3.88112 3.94425 3.98874 4.06214 4.12636 4.20410 4.27062 4.27500 4.42214 4.44286 4.48845 4.52027 4.59960 4.62301 4.74047 4.78459 4.80456 4.88620 4.89612 5.09932 5.17507 5.21621 5.28533 5.30547 5.43053 5.44466 5.61120 5.68896 6.10662 6.24088 6.73218 6.95390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.073 4.073 3 Si 0.744 3.256 4 C -0.139 4.139 5 C 0.134 3.866 6 O -0.291 6.291 7 C 0.041 3.959 8 C 0.519 3.481 9 O -0.509 6.509 10 N -0.710 5.710 11 C 0.121 3.879 12 H 0.109 0.891 13 C -0.134 4.134 14 C -0.074 4.074 15 H 0.100 0.900 16 C -0.066 4.066 17 C -0.088 4.088 18 C -0.088 4.088 19 Br -0.049 7.049 20 C -0.095 4.095 21 C -0.109 4.109 22 C -0.102 4.102 23 C -0.144 4.144 24 C -0.207 4.207 25 C -0.076 4.076 26 C -0.147 4.147 27 C -0.071 4.071 28 H 0.367 0.633 29 H 0.074 0.926 30 H -0.256 1.256 31 H -0.252 1.252 32 H 0.097 0.903 33 H 0.095 0.905 34 H 0.403 0.597 35 H 0.101 0.899 36 H 0.079 0.921 37 H 0.131 0.869 38 H 0.133 0.867 39 H 0.133 0.867 40 H 0.131 0.869 41 H 0.076 0.924 42 H 0.098 0.902 43 H 0.129 0.871 44 H 0.129 0.871 45 H 0.132 0.868 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.592 -2.723 -4.257 5.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.181 4.181 3 Si 0.643 3.357 4 C -0.140 4.140 5 C 0.089 3.911 6 O -0.204 6.204 7 C -0.038 4.038 8 C 0.304 3.696 9 O -0.382 6.382 10 N -0.364 5.364 11 C 0.016 3.984 12 H 0.127 0.873 13 C -0.172 4.172 14 C -0.092 4.092 15 H 0.118 0.882 16 C -0.067 4.067 17 C -0.108 4.108 18 C -0.167 4.167 19 Br 0.036 6.964 20 C -0.114 4.114 21 C -0.128 4.128 22 C -0.120 4.120 23 C -0.182 4.182 24 C -0.226 4.226 25 C -0.094 4.094 26 C -0.165 4.165 27 C -0.088 4.088 28 H 0.215 0.785 29 H 0.092 0.908 30 H -0.181 1.181 31 H -0.177 1.177 32 H 0.114 0.886 33 H 0.113 0.887 34 H 0.238 0.762 35 H 0.119 0.881 36 H 0.098 0.902 37 H 0.149 0.851 38 H 0.151 0.849 39 H 0.151 0.849 40 H 0.148 0.852 41 H 0.095 0.905 42 H 0.116 0.884 43 H 0.147 0.853 44 H 0.147 0.853 45 H 0.150 0.850 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 1.062 -1.487 -3.227 3.709 hybrid contribution 0.141 -2.151 0.214 2.167 sum 1.203 -3.639 -3.012 4.875 Atomic orbital electron populations 1.86694 1.16819 1.33401 1.97157 1.25371 0.84995 1.12815 0.94968 0.93151 0.78534 0.76245 0.87781 1.19733 1.04898 0.90612 0.98792 1.18824 0.94648 0.90740 0.86907 1.86099 1.77900 1.17256 1.39111 1.22463 1.02719 0.81065 0.97538 1.20022 0.78994 0.82415 0.88195 1.90796 1.47262 1.61028 1.39124 1.45471 1.64583 1.06189 1.20155 1.21871 0.95700 0.94499 0.86340 0.87326 1.23440 0.96430 0.93806 1.03526 1.21622 0.98221 0.91033 0.98348 0.88215 1.19666 0.98114 0.94151 0.94777 1.21013 0.99152 0.90846 0.99742 1.21850 1.04750 0.92691 0.97422 1.96788 1.84755 1.29090 1.85734 1.21185 0.97103 0.99279 0.93872 1.21208 0.99220 0.92063 1.00315 1.21184 0.98376 0.98633 0.93827 1.23585 1.00618 0.94550 0.99473 1.21257 1.06187 1.00368 0.94762 1.21029 0.96521 0.94121 0.97742 1.21125 1.02233 0.94587 0.98553 1.20864 0.96331 0.99300 0.92316 0.78486 0.90812 1.18060 1.17668 0.88555 0.88719 0.76229 0.88065 0.90199 0.85086 0.84918 0.84873 0.85163 0.90497 0.88387 0.85285 0.85270 0.85040 0.84512 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.05 12.65 -35.23 -0.45 -2.50 16 2 C -0.07 -0.21 2.33 36.01 0.08 -0.13 16 3 Si 0.74 0.99 30.17 -169.99 -5.13 -4.14 16 4 C -0.14 -0.28 5.28 -104.47 -0.55 -0.83 16 5 C 0.13 0.20 6.62 -39.21 -0.26 -0.06 16 6 O -0.29 -0.55 8.57 -39.32 -0.34 -0.89 16 7 C 0.04 -0.07 5.22 36.01 0.19 0.11 16 8 C 0.52 0.14 7.91 -10.99 -0.09 0.05 16 9 O -0.51 -2.66 16.10 -14.35 -0.23 -2.89 16 10 N -0.71 2.01 5.26 -53.02 -0.28 1.73 16 11 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 12 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 13 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 14 C -0.07 0.24 3.85 -90.96 -0.35 -0.11 16 15 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 16 C -0.07 0.10 5.29 -104.63 -0.55 -0.46 16 17 C -0.09 0.04 9.45 -39.56 -0.37 -0.33 16 18 C -0.09 -0.04 6.22 -39.51 -0.25 -0.29 16 19 Br -0.05 -0.04 33.70 -68.01 -2.29 -2.34 16 20 C -0.09 0.01 9.79 -39.56 -0.39 -0.37 16 21 C -0.11 0.13 10.05 -39.59 -0.40 -0.27 16 22 C -0.10 0.16 8.63 -39.58 -0.34 -0.18 16 23 C -0.14 0.35 7.26 -25.92 -0.19 0.16 16 24 C -0.21 0.11 9.04 -39.43 -0.36 -0.25 16 25 C -0.08 0.07 10.04 -39.60 -0.40 -0.33 16 26 C -0.15 0.09 10.04 -39.56 -0.40 -0.31 16 27 C -0.07 -0.03 8.66 -39.61 -0.34 -0.37 16 28 H 0.37 0.93 8.60 45.56 0.39 1.32 16 29 H 0.07 0.29 7.83 -51.93 -0.41 -0.11 16 30 H -0.26 -1.11 7.11 56.52 0.40 -0.71 16 31 H -0.25 -0.61 7.11 56.52 0.40 -0.20 16 32 H 0.10 -0.42 7.66 -51.93 -0.40 -0.81 16 33 H 0.09 -0.38 7.66 -51.93 -0.40 -0.78 16 34 H 0.40 -2.36 8.70 -40.82 -0.36 -2.71 16 35 H 0.10 -0.36 7.73 -51.93 -0.40 -0.76 16 36 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 37 H 0.13 -0.21 8.05 -52.49 -0.42 -0.63 16 38 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 39 H 0.13 -0.39 8.06 -52.48 -0.42 -0.82 16 40 H 0.13 -0.41 6.65 -52.49 -0.35 -0.76 16 41 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 42 H 0.10 -0.26 6.30 -51.93 -0.33 -0.59 16 43 H 0.13 -0.41 6.30 -52.49 -0.33 -0.74 16 44 H 0.13 -0.40 8.06 -52.48 -0.42 -0.82 16 45 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 46 H 0.14 -0.25 5.13 -52.49 -0.27 -0.51 16 LS Contribution 402.65 15.07 6.07 6.07 Total: 0.00 -8.85 402.65 -13.89 -22.74 By element: Atomic # 1 Polarization: -7.74 SS G_CDS: -5.81 Total: -13.55 kcal Atomic # 6 Polarization: 1.21 SS G_CDS: -5.44 Total: -4.23 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -0.28 Total: 1.73 kcal Atomic # 8 Polarization: -5.26 SS G_CDS: -1.01 Total: -6.28 kcal Atomic # 14 Polarization: 0.99 SS G_CDS: -5.13 Total: -4.14 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.29 Total: -2.34 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -8.85 -13.89 -22.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.612 kcal (2) G-P(sol) polarization free energy of solvation -8.846 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.235 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.737 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.126 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds