Wall clock time and date at job start Sun Mar 7 2021 01:40:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47302 * 2 1 4 4 C 1.50705 * 109.47128 * 240.00095 * 2 1 3 5 5 C 1.38709 * 120.02687 * 285.02154 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00129 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.47033 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00105 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99611 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99563 * 179.97438 * 10 8 7 12 12 H 1.08996 * 112.85300 * 23.80849 * 11 10 8 13 13 C 1.53785 * 113.61194 * 155.00031 * 11 10 8 14 14 C 1.53778 * 87.08000 * 89.11865 * 13 11 10 15 15 H 1.09003 * 113.61108 * 270.88271 * 14 13 11 16 16 C 1.50701 * 113.61355 * 140.06935 * 14 13 11 17 17 C 1.38191 * 119.99656 * 119.99944 * 16 14 13 18 18 C 1.38353 * 119.99052 * 179.97438 * 17 16 14 19 19 Br 1.89096 * 120.01237 * 180.02562 * 18 17 16 20 20 C 1.38309 * 119.97586 * 0.02562 * 18 17 16 21 21 C 1.38234 * 119.99007 * 359.97438 * 20 18 17 22 22 C 1.38218 * 120.01466 * 359.72860 * 21 20 18 23 23 C 1.53780 * 113.61608 * 252.49781 * 11 10 8 24 24 C 1.38759 * 119.88822 * 179.97438 * 5 4 2 25 25 C 1.38126 * 119.94094 * 0.02562 * 24 5 4 26 26 C 1.38290 * 120.05768 * 359.97408 * 25 24 5 27 27 C 1.38164 * 120.02624 * 104.99828 * 4 2 1 28 28 H 0.96698 * 114.00095 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47395 * 120.00391 * 2 1 3 30 30 H 1.48502 * 109.99801 * 58.68203 * 3 2 1 31 31 H 1.48494 * 110.00156 * 180.02562 * 3 2 1 32 32 H 1.09001 * 109.47177 * 299.99686 * 7 6 5 33 33 H 1.09002 * 109.46778 * 59.99753 * 7 6 5 34 34 H 0.97003 * 120.00302 * 0.02562 * 10 8 7 35 35 H 1.09002 * 113.61409 * 203.66936 * 13 11 10 36 36 H 1.09006 * 113.61357 * 334.56962 * 13 11 10 37 37 H 1.08001 * 120.00825 * 0.02562 * 17 16 14 38 38 H 1.08004 * 120.00259 * 180.02562 * 20 18 17 39 39 H 1.08004 * 119.99158 * 179.97438 * 21 20 18 40 40 H 1.07999 * 119.99599 * 180.29156 * 22 21 20 41 41 H 1.08995 * 113.61697 * 25.43467 * 23 11 10 42 42 H 1.08993 * 113.61409 * 156.33992 * 23 11 10 43 43 H 1.07998 * 120.02743 * 180.02562 * 24 5 4 44 44 H 1.08005 * 119.97091 * 180.02562 * 25 24 5 45 45 H 1.07995 * 119.94278 * 180.27458 * 26 25 24 46 46 H 1.07997 * 119.97398 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.8693 -2.0940 -1.3072 6 8 1.3550 -2.8106 -0.2734 7 6 1.3220 -4.2315 -0.4219 8 6 0.7243 -4.8521 0.8146 9 8 0.3627 -4.1470 1.7327 10 7 0.5916 -6.1905 0.8999 11 6 0.0111 -6.7938 2.1022 12 1 -0.6317 -6.1067 2.6524 13 6 -0.6285 -8.1700 1.8534 14 6 0.7524 -8.7780 2.1505 15 1 1.3870 -8.8715 1.2692 16 6 0.6918 -10.0444 2.9651 17 6 1.2030 -11.2212 2.4518 18 6 1.1478 -12.3836 3.2000 19 35 1.8477 -13.9941 2.4984 20 6 0.5805 -12.3673 4.4613 21 6 0.0694 -11.1897 4.9739 22 6 0.1303 -10.0272 4.2286 23 6 1.0398 -7.5191 2.9857 24 6 2.3321 -2.7451 -2.4417 25 6 2.8538 -2.0144 -3.4914 26 6 2.9146 -0.6351 -3.4125 27 6 2.4537 0.0160 -2.2834 28 1 -0.3933 -0.8834 -0.0004 29 1 1.7924 -0.5139 0.8899 30 1 1.5355 2.4771 1.1922 31 1 3.5349 1.7701 -0.0006 32 1 0.7154 -4.4922 -1.2892 33 1 2.3361 -4.6058 -0.5620 34 1 0.8812 -6.7545 0.1657 35 1 -1.3899 -8.4366 2.5864 36 1 -0.9589 -8.3185 0.8252 37 1 1.6463 -11.2333 1.4670 38 1 0.5375 -13.2744 5.0459 39 1 -0.3739 -11.1770 5.9586 40 1 -0.2648 -9.1063 4.6313 41 1 2.0561 -7.1421 2.8718 42 1 0.7345 -7.6078 4.0282 43 1 2.2845 -3.8222 -2.5040 44 1 3.2139 -2.5207 -4.3749 45 1 3.3188 -0.0653 -4.2361 46 1 2.5023 1.0932 -2.2241 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:51 Heat of formation + Delta-G solvation = -14.032442 kcal Electronic energy + Delta-G solvation = -29878.805035 eV Core-core repulsion = 25554.599356 eV Total energy + Delta-G solvation = -4324.205680 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -41.85499 -41.37774 -40.38727 -39.04702 -38.30904 -37.48560 -34.82908 -33.20897 -32.74126 -32.18360 -31.22630 -30.19595 -29.37188 -26.74026 -26.66748 -26.18983 -23.83892 -23.51565 -22.62425 -22.53878 -21.84556 -20.13796 -19.43327 -18.54699 -18.28444 -17.96913 -17.51686 -17.34672 -16.84110 -16.68233 -16.42373 -16.19746 -15.76313 -15.52570 -15.46452 -15.30641 -15.08743 -14.79136 -14.62779 -14.51105 -14.29790 -14.21398 -13.82886 -13.61060 -13.46091 -13.34462 -12.94295 -12.73254 -12.55109 -12.36056 -12.20688 -12.08413 -12.04420 -11.94763 -11.57357 -11.39521 -11.30148 -11.19945 -11.19358 -11.03264 -10.22011 -9.94796 -9.87322 -9.63428 -9.25038 -4.95213 0.07072 0.23838 0.25717 0.38915 0.61972 1.34579 1.36404 1.40086 1.57693 1.93914 2.51960 2.54858 2.70130 3.40394 3.45437 3.57927 3.59894 3.65280 3.81665 3.84899 3.90849 3.92224 3.97060 4.04101 4.07009 4.09349 4.10052 4.22056 4.26830 4.32524 4.39396 4.50156 4.58775 4.64407 4.65008 4.73465 4.80022 4.91187 4.94966 4.95123 4.97937 5.08878 5.19636 5.24865 5.33798 5.39312 5.41768 5.53073 5.58692 5.73146 5.81548 6.21773 6.39971 6.49972 7.06256 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.087 4.087 3 Si 0.822 3.178 4 C -0.166 4.166 5 C 0.118 3.882 6 O -0.319 6.319 7 C 0.038 3.962 8 C 0.516 3.484 9 O -0.570 6.570 10 N -0.692 5.692 11 C 0.116 3.884 12 H 0.085 0.915 13 C -0.122 4.122 14 C -0.065 4.065 15 H 0.115 0.885 16 C -0.067 4.067 17 C -0.096 4.096 18 C -0.103 4.103 19 Br -0.061 7.061 20 C -0.108 4.108 21 C -0.115 4.115 22 C -0.106 4.106 23 C -0.143 4.143 24 C -0.208 4.208 25 C -0.078 4.078 26 C -0.152 4.152 27 C -0.082 4.082 28 H 0.369 0.631 29 H 0.051 0.949 30 H -0.301 1.301 31 H -0.262 1.262 32 H 0.127 0.873 33 H 0.122 0.878 34 H 0.421 0.579 35 H 0.102 0.898 36 H 0.092 0.908 37 H 0.140 0.860 38 H 0.136 0.864 39 H 0.149 0.851 40 H 0.145 0.855 41 H 0.068 0.932 42 H 0.098 0.902 43 H 0.157 0.843 44 H 0.155 0.845 45 H 0.154 0.846 46 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.179 -3.400 -6.411 7.352 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.193 4.193 3 Si 0.723 3.277 4 C -0.167 4.167 5 C 0.073 3.927 6 O -0.233 6.233 7 C -0.040 4.040 8 C 0.303 3.697 9 O -0.448 6.448 10 N -0.346 5.346 11 C 0.010 3.990 12 H 0.103 0.897 13 C -0.160 4.160 14 C -0.083 4.083 15 H 0.133 0.867 16 C -0.068 4.068 17 C -0.116 4.116 18 C -0.182 4.182 19 Br 0.025 6.975 20 C -0.128 4.128 21 C -0.133 4.133 22 C -0.124 4.124 23 C -0.182 4.182 24 C -0.226 4.226 25 C -0.096 4.096 26 C -0.170 4.170 27 C -0.099 4.099 28 H 0.217 0.783 29 H 0.069 0.931 30 H -0.230 1.230 31 H -0.187 1.187 32 H 0.144 0.856 33 H 0.139 0.861 34 H 0.259 0.741 35 H 0.120 0.880 36 H 0.110 0.890 37 H 0.158 0.842 38 H 0.154 0.846 39 H 0.167 0.833 40 H 0.163 0.837 41 H 0.087 0.913 42 H 0.116 0.884 43 H 0.175 0.825 44 H 0.173 0.827 45 H 0.172 0.828 46 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 1.657 -2.236 -5.428 6.100 hybrid contribution -0.057 -1.986 0.932 2.194 sum 1.600 -4.222 -4.496 6.372 Atomic orbital electron populations 1.86643 1.17737 1.33779 1.97236 1.25616 0.84414 1.14215 0.95104 0.92313 0.76482 0.73453 0.85405 1.19793 1.06597 0.91410 0.98907 1.19025 0.95299 0.90761 0.87602 1.86066 1.78242 1.19072 1.39910 1.22711 1.04581 0.79502 0.97160 1.20507 0.78140 0.82929 0.88169 1.90773 1.50160 1.62501 1.41349 1.45340 1.63298 1.05502 1.20434 1.21854 0.95889 0.94625 0.86627 0.89702 1.23380 0.96215 0.92098 1.04318 1.21622 0.98621 0.89683 0.98367 0.86667 1.19845 0.97586 0.94418 0.94972 1.21187 0.99361 0.90838 1.00194 1.21972 1.05600 0.92651 0.97977 1.96762 1.84966 1.29932 1.85865 1.21348 0.97527 0.99965 0.93951 1.21454 0.98956 0.91828 1.01083 1.21441 0.98010 0.99116 0.93872 1.23573 0.99942 0.94934 0.99705 1.21588 1.05283 1.01872 0.93879 1.21430 0.95615 0.94198 0.98357 1.21471 1.01654 0.95198 0.98653 1.21113 0.96278 1.00177 0.92325 0.78257 0.93088 1.22959 1.18730 0.85588 0.86069 0.74077 0.87975 0.88959 0.84173 0.84571 0.83312 0.83747 0.91308 0.88360 0.82528 0.82738 0.82830 0.83004 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -5.50 12.65 -148.98 -1.89 -7.39 16 2 C -0.09 -0.68 2.33 71.24 0.17 -0.52 16 3 Si 0.82 3.23 30.17 68.60 2.07 5.30 16 4 C -0.17 -0.82 5.28 -19.77 -0.10 -0.93 16 5 C 0.12 0.39 6.62 22.51 0.15 0.54 16 6 O -0.32 -1.53 8.57 -73.34 -0.63 -2.16 16 7 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 8 C 0.52 0.59 7.91 87.66 0.69 1.28 16 9 O -0.57 -7.35 16.10 16.01 0.26 -7.09 16 10 N -0.69 4.21 5.26 -440.04 -2.32 1.90 16 11 C 0.12 -0.48 4.32 45.52 0.20 -0.29 16 12 H 0.08 0.11 7.46 -2.39 -0.02 0.09 16 13 C -0.12 0.99 7.29 31.12 0.23 1.22 16 14 C -0.06 0.48 3.85 -11.01 -0.04 0.44 16 15 H 0.12 -1.20 8.09 -2.39 -0.02 -1.22 16 16 C -0.07 0.24 5.29 -19.87 -0.11 0.14 16 17 C -0.10 0.13 9.45 22.29 0.21 0.34 16 18 C -0.10 -0.13 6.22 22.31 0.14 0.01 16 19 Br -0.06 -0.14 33.70 -20.37 -0.69 -0.82 16 20 C -0.11 0.00 9.79 22.29 0.22 0.22 16 21 C -0.11 0.29 10.05 22.26 0.22 0.51 16 22 C -0.11 0.38 8.63 22.27 0.19 0.57 16 23 C -0.14 0.70 7.26 31.12 0.23 0.93 16 24 C -0.21 0.56 9.04 22.37 0.20 0.76 16 25 C -0.08 0.31 10.04 22.26 0.22 0.53 16 26 C -0.15 0.43 10.04 22.28 0.22 0.65 16 27 C -0.08 -0.04 8.66 22.25 0.19 0.15 16 28 H 0.37 2.94 8.60 -74.06 -0.64 2.30 16 29 H 0.05 0.58 7.83 -2.39 -0.02 0.56 16 30 H -0.30 -3.38 7.11 99.48 0.71 -2.68 16 31 H -0.26 -1.38 7.11 99.48 0.71 -0.68 16 32 H 0.13 -1.33 7.66 -2.39 -0.02 -1.35 16 33 H 0.12 -1.20 7.66 -2.39 -0.02 -1.22 16 34 H 0.42 -5.68 8.70 -92.71 -0.81 -6.49 16 35 H 0.10 -0.80 7.73 -2.39 -0.02 -0.81 16 36 H 0.09 -0.93 8.14 -2.38 -0.02 -0.95 16 37 H 0.14 -0.55 8.05 -2.91 -0.02 -0.57 16 38 H 0.14 -0.22 8.06 -2.91 -0.02 -0.25 16 39 H 0.15 -0.95 8.06 -2.91 -0.02 -0.97 16 40 H 0.14 -1.00 6.65 -2.91 -0.02 -1.02 16 41 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 42 H 0.10 -0.49 6.30 -2.39 -0.02 -0.51 16 43 H 0.16 -1.46 6.30 -2.91 -0.02 -1.48 16 44 H 0.15 -1.45 8.06 -2.91 -0.02 -1.48 16 45 H 0.15 -1.20 8.06 -2.91 -0.02 -1.23 16 46 H 0.15 -0.61 5.13 -2.91 -0.01 -0.62 16 Total: 0.00 -24.33 402.65 0.05 -24.27 By element: Atomic # 1 Polarization: -20.42 SS G_CDS: -0.36 Total: -20.78 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: 3.60 Total: 6.78 kcal Atomic # 7 Polarization: 4.21 SS G_CDS: -2.32 Total: 1.90 kcal Atomic # 8 Polarization: -14.39 SS G_CDS: -2.26 Total: -16.64 kcal Atomic # 14 Polarization: 3.23 SS G_CDS: 2.07 Total: 5.30 kcal Atomic # 35 Polarization: -0.14 SS G_CDS: -0.69 Total: -0.82 kcal Total: -24.33 0.05 -24.27 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.243 kcal (2) G-P(sol) polarization free energy of solvation -24.326 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.275 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.032 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds