Wall clock time and date at job start Sun Mar 7 2021 01:40:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.47068 * 2 1 4 4 C 1.50693 * 109.47196 * 120.00104 * 2 1 3 5 5 C 1.38270 * 119.94473 * 65.00173 * 4 2 1 6 6 C 1.38148 * 120.05512 * 179.97438 * 5 4 2 7 7 C 1.38732 * 119.94288 * 0.02562 * 6 5 4 8 8 O 1.35908 * 120.05309 * 180.02562 * 7 6 5 9 9 C 1.42898 * 116.99759 * 179.97438 * 8 7 6 10 10 C 1.50699 * 109.47016 * 179.97438 * 9 8 7 11 11 O 1.21284 * 119.99969 * 359.97438 * 10 9 8 12 12 N 1.34779 * 119.99791 * 180.02562 * 10 9 8 13 13 C 1.46505 * 119.99559 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.85300 * 23.79898 * 13 12 10 15 15 C 1.53780 * 113.61094 * 154.99963 * 13 12 10 16 16 C 1.53778 * 87.08300 * 89.11646 * 15 13 12 17 17 H 1.09003 * 113.61023 * 270.79617 * 16 15 13 18 18 C 1.50699 * 113.61512 * 139.98075 * 16 15 13 19 19 C 1.38224 * 119.99661 * 121.52772 * 18 16 15 20 20 C 1.38260 * 120.02069 * 179.97438 * 19 18 16 21 21 C 1.38197 * 120.00789 * 0.28248 * 20 19 18 22 22 C 1.38349 * 119.99163 * 359.46466 * 21 20 19 23 23 Br 1.89097 * 120.00930 * 180.27891 * 22 21 20 24 24 C 1.38242 * 119.99408 * 301.54794 * 18 16 15 25 25 C 1.53779 * 87.17381 * 25.38781 * 16 15 13 26 26 C 1.38729 * 119.89213 * 0.26755 * 7 6 5 27 27 C 1.38148 * 119.94139 * 359.43782 * 26 7 6 28 28 H 0.96705 * 114.00057 * 299.99458 * 1 2 3 29 29 H 1.09005 * 109.46901 * 240.00186 * 2 1 3 30 30 H 1.48504 * 109.99859 * 300.00386 * 3 2 1 31 31 H 1.48498 * 110.00033 * 61.31759 * 3 2 1 32 32 H 1.07994 * 119.97263 * 359.97407 * 5 4 2 33 33 H 1.08000 * 120.02684 * 179.97438 * 6 5 4 34 34 H 1.08999 * 109.47367 * 59.99468 * 9 8 7 35 35 H 1.08999 * 109.46956 * 299.99614 * 9 8 7 36 36 H 0.96992 * 120.00527 * 359.97438 * 12 10 9 37 37 H 1.09000 * 113.61344 * 334.56043 * 15 13 12 38 38 H 1.09003 * 113.68841 * 203.67632 * 15 13 12 39 39 H 1.08001 * 119.98470 * 359.97438 * 19 18 16 40 40 H 1.08002 * 119.99108 * 179.97438 * 20 19 18 41 41 H 1.08004 * 120.00055 * 179.72824 * 21 20 19 42 42 H 1.08001 * 120.00704 * 359.97438 * 24 18 16 43 43 H 1.09002 * 113.61421 * 89.15854 * 25 16 15 44 44 H 1.08998 * 113.61779 * 220.06137 * 25 16 15 45 45 H 1.07997 * 120.03365 * 179.72125 * 26 7 6 46 46 H 1.08004 * 119.97352 * 180.27525 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6841 -2.0605 1.3971 6 6 2.1440 -2.7142 2.5239 7 6 2.8540 -2.0146 3.4889 8 8 3.3079 -2.6556 4.5981 9 6 4.0319 -1.8724 5.5492 10 6 4.4517 -2.7457 6.7034 11 8 4.1593 -3.9227 6.7110 12 7 5.1512 -2.2184 7.7277 13 6 5.5589 -3.0673 8.8500 14 1 5.6198 -4.1223 8.5825 15 6 6.7993 -2.5483 9.5961 16 6 5.8328 -1.7468 10.4840 17 1 5.6056 -0.7537 10.0965 18 6 6.2221 -1.7319 11.9398 19 6 6.4549 -0.5295 12.5806 20 6 6.8115 -0.5153 13.9164 21 6 6.9412 -1.7036 14.6098 22 6 6.7032 -2.9071 13.9703 23 35 6.8728 -4.5329 14.9208 24 6 6.3468 -2.9209 12.6340 25 6 4.7660 -2.8004 10.1424 26 6 3.0955 -0.6587 3.3222 27 6 2.6388 -0.0110 2.1907 28 1 -0.3933 0.4416 0.7651 29 1 1.7923 -0.5138 -0.8901 30 1 1.5613 2.4679 -1.2085 31 1 1.5878 2.4585 1.2242 32 1 1.1309 -2.6045 0.6459 33 1 1.9502 -3.7687 2.6539 34 1 3.3958 -1.0669 5.9160 35 1 4.9162 -1.4489 5.0731 36 1 5.3848 -1.2771 7.7218 37 1 7.4483 -1.9236 8.9824 38 1 7.3439 -3.3247 10.1334 39 1 6.3580 0.3990 12.0377 40 1 6.9937 0.4245 14.4165 41 1 7.2241 -1.6925 15.6521 42 1 6.1649 -3.8603 12.1333 43 1 4.7525 -3.6468 10.8291 44 1 3.7758 -2.3789 9.9691 45 1 3.6441 -0.1110 4.0741 46 1 2.8304 1.0436 2.0583 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:40:55 Heat of formation + Delta-G solvation = -11.264681 kcal Electronic energy + Delta-G solvation = -29216.349049 eV Core-core repulsion = 24892.263388 eV Total energy + Delta-G solvation = -4324.085661 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -41.78074 -41.27198 -40.36139 -39.23558 -38.61877 -37.22232 -34.77374 -33.33000 -32.42571 -31.90507 -31.69668 -30.25247 -29.53056 -26.72128 -26.41417 -25.98390 -24.11935 -23.51307 -22.61463 -22.34868 -21.80826 -20.19838 -19.50253 -18.51025 -18.32185 -17.89154 -17.42825 -17.15512 -16.83011 -16.55378 -16.27277 -16.15596 -16.03721 -15.61705 -15.55416 -15.18759 -15.07600 -14.67156 -14.60185 -14.48755 -14.35641 -14.25532 -13.73320 -13.63786 -13.49448 -13.46152 -13.31051 -12.93614 -12.36578 -12.29143 -12.11616 -12.06794 -12.01593 -11.89276 -11.59492 -11.54933 -11.33132 -11.20410 -11.02988 -10.56773 -10.18530 -10.02805 -9.83374 -9.61440 -9.23482 -4.89457 0.11286 0.27286 0.28121 0.31933 0.64127 1.34837 1.41936 1.45953 1.61628 1.99670 2.57808 2.58336 2.65565 3.42956 3.45974 3.50675 3.63148 3.67568 3.75001 3.83422 3.84881 3.94197 3.95228 4.04633 4.06140 4.11752 4.23909 4.29928 4.31796 4.42487 4.43410 4.55647 4.57399 4.68755 4.71089 4.74956 4.82532 4.95171 4.98097 4.98282 5.00688 5.11992 5.16776 5.22570 5.26395 5.36661 5.47551 5.50693 5.60700 5.70747 5.85740 6.26920 6.46773 6.51757 7.12674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.083 4.083 3 Si 0.773 3.227 4 C -0.158 4.158 5 C -0.060 4.060 6 C -0.167 4.167 7 C 0.122 3.878 8 O -0.321 6.321 9 C 0.037 3.963 10 C 0.515 3.485 11 O -0.573 6.573 12 N -0.690 5.690 13 C 0.116 3.884 14 H 0.080 0.920 15 C -0.124 4.124 16 C -0.061 4.061 17 H 0.127 0.873 18 C -0.069 4.069 19 C -0.100 4.100 20 C -0.115 4.115 21 C -0.109 4.109 22 C -0.104 4.104 23 Br -0.065 7.065 24 C -0.099 4.099 25 C -0.146 4.146 26 C -0.199 4.199 27 C -0.077 4.077 28 H 0.385 0.615 29 H 0.120 0.880 30 H -0.308 1.308 31 H -0.276 1.276 32 H 0.133 0.867 33 H 0.125 0.875 34 H 0.127 0.873 35 H 0.131 0.869 36 H 0.423 0.577 37 H 0.097 0.903 38 H 0.094 0.906 39 H 0.155 0.845 40 H 0.152 0.848 41 H 0.135 0.865 42 H 0.132 0.868 43 H 0.088 0.912 44 H 0.072 0.928 45 H 0.166 0.834 46 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.097 9.428 1.022 10.766 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.192 4.192 3 Si 0.678 3.322 4 C -0.159 4.159 5 C -0.078 4.078 6 C -0.186 4.186 7 C 0.076 3.924 8 O -0.234 6.234 9 C -0.041 4.041 10 C 0.301 3.699 11 O -0.451 6.451 12 N -0.344 5.344 13 C 0.010 3.990 14 H 0.099 0.901 15 C -0.162 4.162 16 C -0.079 4.079 17 H 0.145 0.855 18 C -0.070 4.070 19 C -0.118 4.118 20 C -0.133 4.133 21 C -0.129 4.129 22 C -0.183 4.183 23 Br 0.021 6.979 24 C -0.119 4.119 25 C -0.185 4.185 26 C -0.217 4.217 27 C -0.094 4.094 28 H 0.235 0.765 29 H 0.138 0.862 30 H -0.237 1.237 31 H -0.202 1.202 32 H 0.151 0.849 33 H 0.143 0.857 34 H 0.144 0.856 35 H 0.148 0.852 36 H 0.262 0.738 37 H 0.116 0.884 38 H 0.112 0.888 39 H 0.173 0.827 40 H 0.170 0.830 41 H 0.153 0.847 42 H 0.150 0.850 43 H 0.106 0.894 44 H 0.091 0.909 45 H 0.184 0.816 46 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 4.823 8.274 0.903 9.619 hybrid contribution -1.227 -0.018 0.577 1.356 sum 3.596 8.256 1.481 9.126 Atomic orbital electron populations 1.86577 1.18853 1.80434 1.50145 1.25252 0.83229 1.12159 0.98538 0.94094 0.90091 0.71603 0.76370 1.20277 1.02691 0.94742 0.98151 1.20919 0.96721 0.94118 0.96090 1.20623 1.02413 1.01033 0.94519 1.19211 0.94704 0.91955 0.86493 1.86132 1.69216 1.38433 1.29632 1.22757 0.99610 0.93483 0.88239 1.20598 0.77636 0.87939 0.83727 1.90776 1.55679 1.19013 1.79667 1.45302 1.55649 1.14108 1.19341 1.21858 0.96361 0.95400 0.85352 0.90141 1.23366 0.95516 1.00205 0.97116 1.21652 0.96182 1.00326 0.89759 0.85520 1.19872 0.98718 0.92307 0.96070 1.21559 0.97055 0.98577 0.94650 1.21501 0.98648 0.98234 0.94940 1.21354 0.99324 0.91272 1.00942 1.21943 1.08342 0.91965 0.96056 1.96763 1.97094 1.28925 1.75156 1.21087 0.99078 0.99639 0.92112 1.23591 0.98601 0.99518 0.96757 1.21500 1.06268 0.92630 1.01326 1.21107 0.95485 1.00390 0.92453 0.76540 0.86210 1.23696 1.20218 0.84939 0.85685 0.85557 0.85187 0.73840 0.88446 0.88786 0.82747 0.83037 0.84661 0.84974 0.89402 0.90922 0.81627 0.83026 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.38 12.83 -148.98 -1.91 -3.29 16 2 C -0.08 0.10 2.80 71.23 0.20 0.30 16 3 Si 0.77 -2.96 29.88 68.60 2.05 -0.91 16 4 C -0.16 0.10 5.35 -19.85 -0.11 -0.01 16 5 C -0.06 -0.13 9.68 22.26 0.22 0.08 16 6 C -0.17 -0.70 9.99 22.37 0.22 -0.48 16 7 C 0.12 0.28 6.69 22.51 0.15 0.43 16 8 O -0.32 -1.49 9.67 -73.48 -0.71 -2.20 16 9 C 0.04 -0.19 5.22 71.24 0.37 0.18 16 10 C 0.51 0.45 7.91 87.66 0.69 1.14 16 11 O -0.57 -7.71 16.10 16.00 0.26 -7.45 16 12 N -0.69 4.64 5.26 -439.74 -2.31 2.32 16 13 C 0.12 -0.44 4.33 45.58 0.20 -0.24 16 14 H 0.08 0.19 7.46 -2.39 -0.02 0.18 16 15 C -0.12 0.99 7.29 31.12 0.23 1.21 16 16 C -0.06 0.51 3.85 -11.02 -0.04 0.46 16 17 H 0.13 -1.66 8.09 -2.39 -0.02 -1.68 16 18 C -0.07 0.29 5.29 -19.87 -0.11 0.18 16 19 C -0.10 0.56 9.71 22.27 0.22 0.77 16 20 C -0.11 0.44 10.05 22.27 0.22 0.67 16 21 C -0.11 0.03 9.79 22.29 0.22 0.25 16 22 C -0.10 -0.19 6.22 22.31 0.14 -0.05 16 23 Br -0.06 -0.23 33.70 -20.37 -0.69 -0.91 16 24 C -0.10 0.05 8.28 22.29 0.18 0.23 16 25 C -0.15 0.62 7.27 31.18 0.23 0.85 16 26 C -0.20 0.79 9.04 22.37 0.20 0.99 16 27 C -0.08 0.30 8.66 22.26 0.19 0.49 16 28 H 0.39 -1.26 8.70 -74.05 -0.64 -1.90 16 29 H 0.12 -0.27 7.96 -2.38 -0.02 -0.28 16 30 H -0.31 -1.47 7.11 99.48 0.71 -0.76 16 31 H -0.28 0.38 7.01 99.48 0.70 1.08 16 32 H 0.13 0.18 8.06 -2.91 -0.02 0.16 16 33 H 0.13 0.62 8.06 -2.91 -0.02 0.60 16 34 H 0.13 -1.49 7.65 -2.39 -0.02 -1.51 16 35 H 0.13 -1.59 7.67 -2.39 -0.02 -1.61 16 36 H 0.42 -6.36 8.70 -92.71 -0.81 -7.16 16 37 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 38 H 0.09 -0.58 7.64 -2.39 -0.02 -0.59 16 39 H 0.15 -1.71 8.05 -2.91 -0.02 -1.73 16 40 H 0.15 -1.25 8.06 -2.91 -0.02 -1.27 16 41 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 42 H 0.13 -0.15 6.73 -2.91 -0.02 -0.17 16 43 H 0.09 -0.21 6.40 -2.39 -0.02 -0.23 16 44 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 45 H 0.17 -1.94 6.30 -2.91 -0.02 -1.95 16 46 H 0.15 -1.31 4.83 -2.91 -0.01 -1.33 16 Total: 0.00 -26.67 403.66 -0.07 -26.74 By element: Atomic # 1 Polarization: -21.40 SS G_CDS: -0.38 Total: -21.78 kcal Atomic # 6 Polarization: 3.85 SS G_CDS: 3.63 Total: 7.48 kcal Atomic # 7 Polarization: 4.64 SS G_CDS: -2.31 Total: 2.32 kcal Atomic # 8 Polarization: -10.58 SS G_CDS: -2.36 Total: -12.95 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.05 Total: -0.91 kcal Atomic # 35 Polarization: -0.23 SS G_CDS: -0.69 Total: -0.91 kcal Total: -26.67 -0.07 -26.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.474 kcal (2) G-P(sol) polarization free energy of solvation -26.670 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.739 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds