Wall clock time and date at job start Sun Mar 7 2021 01:41:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86295 * 109.47459 * 2 1 4 4 C 1.50700 * 109.47062 * 120.00277 * 2 1 3 5 5 C 1.38259 * 119.94835 * 64.99878 * 4 2 1 6 6 C 1.38145 * 120.06180 * 179.97438 * 5 4 2 7 7 C 1.38735 * 119.93867 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05527 * 180.02562 * 7 6 5 9 9 C 1.42895 * 117.00356 * 179.97438 * 8 7 6 10 10 C 1.52997 * 109.47503 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47212 * 180.02562 * 10 9 8 12 12 O 1.21280 * 119.99781 * 0.02562 * 11 10 9 13 13 N 1.34780 * 119.99795 * 179.97438 * 11 10 9 14 14 C 1.46497 * 119.99566 * 180.02562 * 13 11 10 15 15 H 1.09005 * 112.85572 * 336.20166 * 14 13 11 16 16 C 1.53787 * 113.61166 * 107.50579 * 14 13 11 17 17 C 1.53780 * 87.07920 * 89.11718 * 16 14 13 18 18 H 1.09007 * 113.61541 * 270.88275 * 17 16 14 19 19 C 1.50703 * 113.61994 * 139.98162 * 17 16 14 20 20 C 1.38221 * 119.99144 * 322.22782 * 19 17 16 21 21 C 1.38259 * 120.02165 * 179.76390 * 20 19 17 22 22 C 1.38197 * 120.00812 * 0.50910 * 21 20 19 23 23 C 1.38348 * 119.98669 * 359.74170 * 22 21 20 24 24 Br 1.89102 * 120.00701 * 179.97438 * 23 22 21 25 25 C 1.38232 * 119.99823 * 142.49494 * 19 17 16 26 26 C 1.53777 * 113.61489 * 205.00300 * 14 13 11 27 27 C 1.38728 * 119.88868 * 0.27368 * 7 6 5 28 28 C 1.38148 * 119.94480 * 359.47379 * 27 7 6 29 29 H 0.96698 * 114.00487 * 60.00001 * 1 2 3 30 30 H 1.09003 * 109.47203 * 239.99842 * 2 1 3 31 31 H 1.48507 * 109.99958 * 59.99873 * 3 2 1 32 32 H 1.48494 * 110.00384 * 181.32047 * 3 2 1 33 33 H 1.08008 * 119.97239 * 359.97438 * 5 4 2 34 34 H 1.07998 * 120.03366 * 179.97438 * 6 5 4 35 35 H 1.09002 * 109.46880 * 60.00021 * 9 8 7 36 36 H 1.08998 * 109.47064 * 300.00846 * 9 8 7 37 37 H 1.09002 * 109.47153 * 60.00043 * 10 9 8 38 38 H 1.09001 * 109.46832 * 300.00234 * 10 9 8 39 39 H 0.96995 * 120.00011 * 0.02562 * 13 11 10 40 40 H 1.09003 * 113.61240 * 203.66112 * 16 14 13 41 41 H 1.08987 * 113.61320 * 334.56642 * 16 14 13 42 42 H 1.08006 * 119.98743 * 359.97438 * 20 19 17 43 43 H 1.07996 * 120.00107 * 180.27023 * 21 20 19 44 44 H 1.07999 * 120.00801 * 179.76627 * 22 21 20 45 45 H 1.07999 * 120.00563 * 0.02562 * 25 19 17 46 46 H 1.09004 * 113.61607 * 25.42965 * 26 14 13 47 47 H 1.08997 * 113.61941 * 156.25638 * 26 14 13 48 48 H 1.08004 * 120.02452 * 179.72319 * 27 7 6 49 49 H 1.08002 * 119.97189 * 180.22949 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2304 5 6 1.6840 -2.0605 1.3972 6 6 2.1438 -2.7142 2.5240 7 6 2.8548 -2.0149 3.4884 8 8 3.3087 -2.6558 4.5976 9 6 4.0337 -1.8730 5.5481 10 6 4.4608 -2.7598 6.7194 11 6 5.2249 -1.9341 7.7222 12 8 5.4091 -0.7525 7.5201 13 7 5.7025 -2.5085 8.8440 14 6 6.4447 -1.7057 9.8190 15 1 6.8982 -0.8176 9.3787 16 6 5.6583 -1.4224 11.1099 17 6 6.2454 -2.7322 11.6617 18 1 5.6387 -3.6102 11.4400 19 6 6.6495 -2.6493 13.1112 20 6 7.2228 -1.4919 13.6036 21 6 7.5893 -1.4135 14.9344 22 6 7.3922 -2.4960 15.7705 23 6 6.8232 -3.6564 15.2769 24 35 6.5539 -5.1383 16.4203 25 6 6.4519 -3.7326 13.9468 26 6 7.4145 -2.5282 10.6837 27 6 3.0972 -0.6592 3.3212 28 6 2.6397 -0.0113 2.1901 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5139 -0.8900 31 1 1.5615 2.4679 1.2085 32 1 3.5345 1.7702 -0.0322 33 1 1.1307 -2.6046 0.6459 34 1 1.9500 -3.7687 2.6540 35 1 3.3983 -1.0669 5.9151 36 1 4.9181 -1.4501 5.0716 37 1 5.0964 -3.5656 6.3522 38 1 3.5766 -3.1830 7.1960 39 1 5.5547 -3.4534 9.0058 40 1 5.9977 -0.5335 11.6418 41 1 4.5768 -1.4504 10.9773 42 1 7.3814 -0.6474 12.9492 43 1 8.0332 -0.5075 15.3198 44 1 7.6819 -2.4361 16.8092 45 1 6.0083 -4.6385 13.5609 46 1 7.7507 -3.4491 10.2071 47 1 8.2348 -1.9421 11.0979 48 1 3.6466 -0.1117 4.0728 49 1 2.8313 1.0433 2.0578 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:41:02 Heat of formation + Delta-G solvation = -22.773910 kcal Electronic energy + Delta-G solvation = -30783.496193 eV Core-core repulsion = 26303.373836 eV Total energy + Delta-G solvation = -4480.122357 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.077 amu Computer time = 2.95 seconds Orbital eigenvalues (eV) -41.81830 -41.26518 -40.50428 -39.21799 -38.82623 -37.21148 -34.80963 -33.51920 -33.15359 -32.22292 -31.93885 -31.43685 -30.16945 -27.02786 -26.92206 -26.21978 -25.39468 -23.73734 -23.54707 -22.61117 -22.06883 -21.62206 -20.21650 -19.55882 -18.40648 -18.37358 -17.84004 -17.52299 -17.32329 -17.08157 -16.66230 -16.57778 -16.31650 -16.03625 -15.74441 -15.45484 -15.29055 -15.19027 -14.74885 -14.64978 -14.60454 -14.45002 -14.30904 -14.14088 -13.83374 -13.67394 -13.62453 -13.50891 -13.06237 -12.97367 -12.81248 -12.46724 -12.34040 -12.11957 -12.08120 -11.93200 -11.82160 -11.72893 -11.64827 -11.47766 -11.22078 -11.07558 -10.28653 -10.25070 -10.00366 -9.95017 -9.68928 -9.16074 -4.96117 0.00653 0.17272 0.31101 0.35017 0.61395 1.30807 1.42793 1.59966 1.65553 1.99374 2.37815 2.46257 2.66501 3.23973 3.41630 3.43612 3.45920 3.49933 3.68113 3.73524 3.76189 3.78410 3.81166 3.86513 3.90911 3.95986 4.01162 4.14468 4.22798 4.27058 4.28976 4.34925 4.43238 4.46018 4.51148 4.53365 4.54795 4.60737 4.66416 4.73962 4.76870 4.81130 4.83011 4.93107 4.96223 5.11655 5.20951 5.23608 5.30196 5.33201 5.46305 5.53044 5.70524 5.72626 6.24963 6.35780 6.65059 7.01080 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.065 4.065 3 Si 0.679 3.321 4 C -0.113 4.113 5 C -0.050 4.050 6 C -0.149 4.149 7 C 0.138 3.862 8 O -0.315 6.315 9 C 0.073 3.927 10 C -0.141 4.141 11 C 0.524 3.476 12 O -0.535 6.535 13 N -0.712 5.712 14 C 0.119 3.881 15 H 0.107 0.893 16 C -0.143 4.143 17 C -0.074 4.074 18 H 0.100 0.900 19 C -0.065 4.065 20 C -0.102 4.102 21 C -0.109 4.109 22 C -0.095 4.095 23 C -0.088 4.088 24 Br -0.049 7.049 25 C -0.088 4.088 26 C -0.135 4.135 27 C -0.201 4.201 28 C -0.082 4.082 29 H 0.381 0.619 30 H 0.073 0.927 31 H -0.251 1.251 32 H -0.255 1.255 33 H 0.135 0.865 34 H 0.136 0.864 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.109 0.891 38 H 0.108 0.892 39 H 0.404 0.596 40 H 0.097 0.903 41 H 0.076 0.924 42 H 0.130 0.870 43 H 0.133 0.867 44 H 0.133 0.867 45 H 0.131 0.869 46 H 0.079 0.921 47 H 0.100 0.900 48 H 0.134 0.866 49 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.793 -0.499 -2.112 2.311 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.176 4.176 3 Si 0.581 3.419 4 C -0.114 4.114 5 C -0.068 4.068 6 C -0.167 4.167 7 C 0.092 3.908 8 O -0.229 6.229 9 C -0.003 4.003 10 C -0.181 4.181 11 C 0.310 3.690 12 O -0.412 6.412 13 N -0.363 5.363 14 C 0.013 3.987 15 H 0.125 0.875 16 C -0.182 4.182 17 C -0.092 4.092 18 H 0.118 0.882 19 C -0.066 4.066 20 C -0.120 4.120 21 C -0.128 4.128 22 C -0.115 4.115 23 C -0.167 4.167 24 Br 0.036 6.964 25 C -0.108 4.108 26 C -0.173 4.173 27 C -0.220 4.220 28 C -0.100 4.100 29 H 0.229 0.771 30 H 0.091 0.909 31 H -0.176 1.176 32 H -0.180 1.180 33 H 0.153 0.847 34 H 0.154 0.846 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.127 0.873 38 H 0.127 0.873 39 H 0.239 0.761 40 H 0.115 0.885 41 H 0.095 0.905 42 H 0.148 0.852 43 H 0.151 0.849 44 H 0.151 0.849 45 H 0.149 0.851 46 H 0.097 0.903 47 H 0.118 0.882 48 H 0.152 0.848 49 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 1.392 -0.120 -0.784 1.602 hybrid contribution 0.152 -0.552 0.305 0.649 sum 1.545 -0.672 -0.479 1.751 Atomic orbital electron populations 1.86498 1.17340 1.81764 1.49650 1.24594 0.85590 1.10090 0.97350 0.95437 0.80803 0.78323 0.87338 1.19243 1.01531 0.94483 0.96122 1.20823 0.96221 0.93344 0.96437 1.20509 1.01600 1.00891 0.93707 1.18951 0.94239 0.90776 0.86808 1.85970 1.69053 1.38434 1.29399 1.22426 0.96385 0.93341 0.88105 1.21467 1.02244 0.99598 0.94801 1.20305 0.78844 0.88011 0.81817 1.90759 1.57683 1.16051 1.76663 1.45625 1.56712 1.13253 1.20734 1.21870 0.92966 0.95586 0.88268 0.87479 1.23577 1.01146 0.97434 0.96041 1.21623 0.98034 0.99506 0.90070 0.88177 1.19671 0.98454 0.93474 0.95045 1.21177 0.97563 0.97660 0.95637 1.21203 0.99593 0.98496 0.93533 1.21181 0.97866 0.91786 1.00637 1.21849 1.05745 0.94304 0.94811 1.96788 1.95984 1.39731 1.63866 1.21020 0.99225 0.99036 0.91475 1.23434 0.96748 1.01177 0.95928 1.21212 1.06405 0.94020 1.00314 1.20688 0.97333 0.98677 0.93266 0.77117 0.90886 1.17616 1.18017 0.84700 0.84599 0.90884 0.90892 0.87317 0.87331 0.76119 0.88495 0.90517 0.85193 0.84895 0.84924 0.85065 0.90257 0.88181 0.84825 0.86243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.40 12.81 -35.23 -0.45 -0.85 16 2 C -0.07 -0.04 2.79 36.01 0.10 0.06 16 3 Si 0.68 -0.21 29.84 -169.99 -5.07 -5.29 16 4 C -0.11 -0.35 5.38 -104.60 -0.56 -0.91 16 5 C -0.05 -0.12 9.68 -39.61 -0.38 -0.51 16 6 C -0.15 -0.37 9.99 -39.43 -0.39 -0.76 16 7 C 0.14 0.44 6.69 -39.22 -0.26 0.18 16 8 O -0.31 -0.72 10.14 -19.43 -0.20 -0.92 16 9 C 0.07 0.05 4.03 37.16 0.15 0.20 16 10 C -0.14 0.26 6.07 -27.88 -0.17 0.09 16 11 C 0.52 0.02 7.83 -10.98 -0.09 -0.06 16 12 O -0.54 -2.23 15.58 5.56 0.09 -2.15 16 13 N -0.71 1.68 5.26 -53.01 -0.28 1.40 16 14 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 15 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 16 C -0.14 0.31 7.25 -25.92 -0.19 0.12 16 17 C -0.07 0.20 3.86 -90.96 -0.35 -0.15 16 18 H 0.10 -0.36 8.10 -51.92 -0.42 -0.78 16 19 C -0.07 0.07 5.29 -104.63 -0.55 -0.48 16 20 C -0.10 0.14 8.60 -39.58 -0.34 -0.21 16 21 C -0.11 0.10 10.05 -39.59 -0.40 -0.29 16 22 C -0.09 -0.01 9.79 -39.56 -0.39 -0.39 16 23 C -0.09 -0.07 6.22 -39.52 -0.25 -0.31 16 24 Br -0.05 -0.06 33.70 -68.01 -2.29 -2.35 16 25 C -0.09 0.01 9.45 -39.56 -0.37 -0.36 16 26 C -0.13 0.42 7.29 -25.92 -0.19 0.23 16 27 C -0.20 -0.65 9.04 -39.43 -0.36 -1.01 16 28 C -0.08 -0.29 8.66 -39.60 -0.34 -0.63 16 29 H 0.38 -1.67 8.74 45.56 0.40 -1.27 16 30 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H -0.25 -0.74 7.05 56.52 0.40 -0.34 16 32 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 33 H 0.14 0.10 8.06 -52.48 -0.42 -0.33 16 34 H 0.14 0.10 8.06 -52.49 -0.42 -0.32 16 35 H 0.07 0.09 7.61 -51.93 -0.39 -0.30 16 36 H 0.07 0.08 7.63 -51.93 -0.40 -0.32 16 37 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 38 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 39 H 0.40 -2.00 8.70 -40.82 -0.36 -2.35 16 40 H 0.10 -0.23 6.32 -51.93 -0.33 -0.56 16 41 H 0.08 -0.10 8.14 -51.94 -0.42 -0.52 16 42 H 0.13 -0.39 6.68 -52.48 -0.35 -0.74 16 43 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 44 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 45 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 46 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 47 H 0.10 -0.32 7.72 -51.93 -0.40 -0.72 16 48 H 0.13 0.27 6.30 -52.48 -0.33 -0.06 16 49 H 0.12 0.36 4.86 -52.49 -0.26 0.10 16 LS Contribution 424.70 15.07 6.40 6.40 Total: 0.00 -9.13 424.70 -14.07 -23.20 By element: Atomic # 1 Polarization: -7.11 SS G_CDS: -6.64 Total: -13.75 kcal Atomic # 6 Polarization: -0.09 SS G_CDS: -5.62 Total: -5.71 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: -0.28 Total: 1.40 kcal Atomic # 8 Polarization: -3.35 SS G_CDS: -0.56 Total: -3.91 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.07 Total: -5.29 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -9.13 -14.07 -23.20 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.431 kcal (2) G-P(sol) polarization free energy of solvation -9.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.704 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.205 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.95 seconds