Wall clock time and date at job start Sun Mar 7 2021 01:41:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86295 * 109.47459 * 2 1 4 4 C 1.50700 * 109.47062 * 120.00277 * 2 1 3 5 5 C 1.38259 * 119.94835 * 64.99878 * 4 2 1 6 6 C 1.38145 * 120.06180 * 179.97438 * 5 4 2 7 7 C 1.38735 * 119.93867 * 359.97438 * 6 5 4 8 8 O 1.35900 * 120.05527 * 180.02562 * 7 6 5 9 9 C 1.42895 * 117.00356 * 179.97438 * 8 7 6 10 10 C 1.52997 * 109.47503 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47212 * 180.02562 * 10 9 8 12 12 O 1.21280 * 119.99781 * 0.02562 * 11 10 9 13 13 N 1.34780 * 119.99795 * 179.97438 * 11 10 9 14 14 C 1.46497 * 119.99566 * 180.02562 * 13 11 10 15 15 H 1.09005 * 112.85572 * 336.20166 * 14 13 11 16 16 C 1.53787 * 113.61166 * 107.50579 * 14 13 11 17 17 C 1.53780 * 87.07920 * 89.11718 * 16 14 13 18 18 H 1.09007 * 113.61541 * 270.88275 * 17 16 14 19 19 C 1.50703 * 113.61994 * 139.98162 * 17 16 14 20 20 C 1.38221 * 119.99144 * 322.22782 * 19 17 16 21 21 C 1.38259 * 120.02165 * 179.76390 * 20 19 17 22 22 C 1.38197 * 120.00812 * 0.50910 * 21 20 19 23 23 C 1.38348 * 119.98669 * 359.74170 * 22 21 20 24 24 Br 1.89102 * 120.00701 * 179.97438 * 23 22 21 25 25 C 1.38232 * 119.99823 * 142.49494 * 19 17 16 26 26 C 1.53777 * 113.61489 * 205.00300 * 14 13 11 27 27 C 1.38728 * 119.88868 * 0.27368 * 7 6 5 28 28 C 1.38148 * 119.94480 * 359.47379 * 27 7 6 29 29 H 0.96698 * 114.00487 * 60.00001 * 1 2 3 30 30 H 1.09003 * 109.47203 * 239.99842 * 2 1 3 31 31 H 1.48507 * 109.99958 * 59.99873 * 3 2 1 32 32 H 1.48494 * 110.00384 * 181.32047 * 3 2 1 33 33 H 1.08008 * 119.97239 * 359.97438 * 5 4 2 34 34 H 1.07998 * 120.03366 * 179.97438 * 6 5 4 35 35 H 1.09002 * 109.46880 * 60.00021 * 9 8 7 36 36 H 1.08998 * 109.47064 * 300.00846 * 9 8 7 37 37 H 1.09002 * 109.47153 * 60.00043 * 10 9 8 38 38 H 1.09001 * 109.46832 * 300.00234 * 10 9 8 39 39 H 0.96995 * 120.00011 * 0.02562 * 13 11 10 40 40 H 1.09003 * 113.61240 * 203.66112 * 16 14 13 41 41 H 1.08987 * 113.61320 * 334.56642 * 16 14 13 42 42 H 1.08006 * 119.98743 * 359.97438 * 20 19 17 43 43 H 1.07996 * 120.00107 * 180.27023 * 21 20 19 44 44 H 1.07999 * 120.00801 * 179.76627 * 22 21 20 45 45 H 1.07999 * 120.00563 * 0.02562 * 25 19 17 46 46 H 1.09004 * 113.61607 * 25.42965 * 26 14 13 47 47 H 1.08997 * 113.61941 * 156.25638 * 26 14 13 48 48 H 1.08004 * 120.02452 * 179.72319 * 27 7 6 49 49 H 1.08002 * 119.97189 * 180.22949 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2304 5 6 1.6840 -2.0605 1.3972 6 6 2.1438 -2.7142 2.5240 7 6 2.8548 -2.0149 3.4884 8 8 3.3087 -2.6558 4.5976 9 6 4.0337 -1.8730 5.5481 10 6 4.4608 -2.7598 6.7194 11 6 5.2249 -1.9341 7.7222 12 8 5.4091 -0.7525 7.5201 13 7 5.7025 -2.5085 8.8440 14 6 6.4447 -1.7057 9.8190 15 1 6.8982 -0.8176 9.3787 16 6 5.6583 -1.4224 11.1099 17 6 6.2454 -2.7322 11.6617 18 1 5.6387 -3.6102 11.4400 19 6 6.6495 -2.6493 13.1112 20 6 7.2228 -1.4919 13.6036 21 6 7.5893 -1.4135 14.9344 22 6 7.3922 -2.4960 15.7705 23 6 6.8232 -3.6564 15.2769 24 35 6.5539 -5.1383 16.4203 25 6 6.4519 -3.7326 13.9468 26 6 7.4145 -2.5282 10.6837 27 6 3.0972 -0.6592 3.3212 28 6 2.6397 -0.0113 2.1901 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5139 -0.8900 31 1 1.5615 2.4679 1.2085 32 1 3.5345 1.7702 -0.0322 33 1 1.1307 -2.6046 0.6459 34 1 1.9500 -3.7687 2.6540 35 1 3.3983 -1.0669 5.9151 36 1 4.9181 -1.4501 5.0716 37 1 5.0964 -3.5656 6.3522 38 1 3.5766 -3.1830 7.1960 39 1 5.5547 -3.4534 9.0058 40 1 5.9977 -0.5335 11.6418 41 1 4.5768 -1.4504 10.9773 42 1 7.3814 -0.6474 12.9492 43 1 8.0332 -0.5075 15.3198 44 1 7.6819 -2.4361 16.8092 45 1 6.0083 -4.6385 13.5609 46 1 7.7507 -3.4491 10.2071 47 1 8.2348 -1.9421 11.0979 48 1 3.6466 -0.1117 4.0728 49 1 2.8313 1.0433 2.0578 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:41:01 Heat of formation + Delta-G solvation = -19.146916 kcal Electronic energy + Delta-G solvation = -30783.338915 eV Core-core repulsion = 26303.373836 eV Total energy + Delta-G solvation = -4479.965079 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.077 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -41.74589 -41.37161 -40.49446 -39.25647 -38.82115 -37.24807 -34.77941 -33.52922 -33.12149 -32.27283 -31.99844 -31.50138 -30.13380 -27.01705 -26.73148 -26.22579 -25.42132 -23.78715 -23.52250 -22.54319 -22.17499 -21.60254 -20.08051 -19.67520 -18.37681 -18.34196 -17.81992 -17.56490 -17.33450 -17.04475 -16.77667 -16.51020 -16.25535 -16.03916 -15.87493 -15.52712 -15.20151 -15.15846 -14.77794 -14.66042 -14.55242 -14.44238 -14.27036 -14.16483 -13.98805 -13.70172 -13.51873 -13.43181 -13.03486 -12.96553 -12.82642 -12.49156 -12.35955 -12.04491 -12.03193 -11.97131 -11.94461 -11.81527 -11.56900 -11.39530 -11.18971 -11.12841 -10.30019 -10.19351 -10.16739 -9.87663 -9.63516 -9.33829 -4.98271 0.06859 0.10778 0.16274 0.25424 0.61559 1.29337 1.44506 1.60266 1.60697 1.95145 2.38995 2.49477 2.54714 3.38028 3.41565 3.49661 3.58039 3.59129 3.64624 3.71042 3.81463 3.84851 3.88760 3.93353 3.95203 4.07371 4.09232 4.10323 4.21672 4.26609 4.32730 4.39274 4.42721 4.55808 4.60614 4.61641 4.64716 4.69650 4.73713 4.80329 4.82626 4.91489 4.95478 4.98662 5.04757 5.10376 5.12109 5.19554 5.33904 5.35501 5.44025 5.57823 5.60022 5.81404 6.18408 6.40487 6.92686 7.10278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.069 4.069 3 Si 0.769 3.231 4 C -0.130 4.130 5 C -0.054 4.054 6 C -0.152 4.152 7 C 0.125 3.875 8 O -0.316 6.316 9 C 0.071 3.929 10 C -0.131 4.131 11 C 0.522 3.478 12 O -0.584 6.584 13 N -0.697 5.697 14 C 0.114 3.886 15 H 0.087 0.913 16 C -0.142 4.142 17 C -0.066 4.066 18 H 0.113 0.887 19 C -0.067 4.067 20 C -0.106 4.106 21 C -0.114 4.114 22 C -0.108 4.108 23 C -0.103 4.103 24 Br -0.061 7.061 25 C -0.097 4.097 26 C -0.124 4.124 27 C -0.212 4.212 28 C -0.103 4.103 29 H 0.403 0.597 30 H 0.098 0.902 31 H -0.302 1.302 32 H -0.292 1.292 33 H 0.154 0.846 34 H 0.154 0.846 35 H 0.061 0.939 36 H 0.064 0.936 37 H 0.131 0.869 38 H 0.129 0.871 39 H 0.419 0.581 40 H 0.099 0.901 41 H 0.068 0.932 42 H 0.146 0.854 43 H 0.150 0.850 44 H 0.137 0.863 45 H 0.139 0.861 46 H 0.089 0.911 47 H 0.102 0.898 48 H 0.135 0.865 49 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.500 -1.687 -2.928 3.416 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.374 6.374 2 C -0.180 4.180 3 Si 0.676 3.324 4 C -0.130 4.130 5 C -0.072 4.072 6 C -0.170 4.170 7 C 0.079 3.921 8 O -0.229 6.229 9 C -0.004 4.004 10 C -0.171 4.171 11 C 0.310 3.690 12 O -0.464 6.464 13 N -0.349 5.349 14 C 0.008 3.992 15 H 0.105 0.895 16 C -0.180 4.180 17 C -0.084 4.084 18 H 0.131 0.869 19 C -0.068 4.068 20 C -0.124 4.124 21 C -0.133 4.133 22 C -0.128 4.128 23 C -0.182 4.182 24 Br 0.025 6.975 25 C -0.117 4.117 26 C -0.162 4.162 27 C -0.230 4.230 28 C -0.121 4.121 29 H 0.255 0.745 30 H 0.116 0.884 31 H -0.230 1.230 32 H -0.220 1.220 33 H 0.172 0.828 34 H 0.171 0.829 35 H 0.080 0.920 36 H 0.082 0.918 37 H 0.149 0.851 38 H 0.147 0.853 39 H 0.257 0.743 40 H 0.117 0.883 41 H 0.087 0.913 42 H 0.163 0.837 43 H 0.168 0.832 44 H 0.155 0.845 45 H 0.157 0.843 46 H 0.107 0.893 47 H 0.120 0.880 48 H 0.153 0.847 49 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 1.082 -1.350 -1.612 2.365 hybrid contribution 0.259 -0.121 0.604 0.669 sum 1.341 -1.471 -1.008 2.232 Atomic orbital electron populations 1.86442 1.17169 1.82321 1.51431 1.24667 0.85854 1.10282 0.97153 0.94596 0.77244 0.76029 0.84524 1.19642 1.01310 0.95175 0.96867 1.21098 0.96077 0.93213 0.96825 1.20798 1.00987 1.01760 0.93446 1.19138 0.94714 0.90814 0.87429 1.85957 1.69136 1.38533 1.29309 1.22468 0.95632 0.93770 0.88579 1.21436 1.03164 0.99085 0.93382 1.20625 0.78498 0.87478 0.82398 1.90744 1.59700 1.18175 1.77775 1.45522 1.55607 1.13965 1.19824 1.21855 0.93572 0.95443 0.88284 0.89509 1.23565 1.00578 0.98024 0.95873 1.21621 0.98190 0.99528 0.89111 0.86938 1.19844 0.98073 0.93212 0.95646 1.21438 0.97002 0.98130 0.95810 1.21459 0.99335 0.98802 0.93667 1.21350 0.98221 0.92030 1.01193 1.21971 1.06777 0.94292 0.95172 1.96761 1.96082 1.40379 1.64327 1.21185 0.99441 0.99760 0.91326 1.23378 0.96399 1.01265 0.95138 1.21323 1.06717 0.94516 1.00474 1.20832 0.98415 0.98768 0.94043 0.74549 0.88430 1.22999 1.21962 0.82805 0.82873 0.92035 0.91815 0.85137 0.85308 0.74289 0.88292 0.91316 0.83652 0.83226 0.84522 0.84327 0.89276 0.87959 0.84705 0.86710 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.26 12.81 -148.98 -1.91 -2.17 16 2 C -0.07 -0.04 2.79 71.24 0.20 0.16 16 3 Si 0.77 0.01 29.84 68.60 2.05 2.06 16 4 C -0.13 -0.84 5.38 -19.85 -0.11 -0.95 16 5 C -0.05 -0.24 9.68 22.25 0.22 -0.03 16 6 C -0.15 -0.73 9.99 22.37 0.22 -0.51 16 7 C 0.12 0.90 6.69 22.51 0.15 1.05 16 8 O -0.32 -1.56 10.14 -92.43 -0.94 -2.50 16 9 C 0.07 0.17 4.03 71.98 0.29 0.46 16 10 C -0.13 0.54 6.07 29.85 0.18 0.73 16 11 C 0.52 0.20 7.83 87.66 0.69 0.88 16 12 O -0.58 -5.83 15.58 -3.03 -0.05 -5.88 16 13 N -0.70 3.66 5.26 -440.03 -2.32 1.35 16 14 C 0.11 -0.44 4.32 45.52 0.20 -0.24 16 15 H 0.09 0.08 7.46 -2.38 -0.02 0.06 16 16 C -0.14 0.65 7.25 31.12 0.23 0.87 16 17 C -0.07 0.43 3.86 -11.01 -0.04 0.39 16 18 H 0.11 -0.99 8.10 -2.38 -0.02 -1.01 16 19 C -0.07 0.19 5.29 -19.87 -0.11 0.09 16 20 C -0.11 0.35 8.60 22.27 0.19 0.54 16 21 C -0.11 0.26 10.05 22.26 0.22 0.48 16 22 C -0.11 -0.04 9.79 22.29 0.22 0.18 16 23 C -0.10 -0.19 6.22 22.31 0.14 -0.05 16 24 Br -0.06 -0.17 33.70 -20.37 -0.69 -0.86 16 25 C -0.10 0.04 9.45 22.28 0.21 0.25 16 26 C -0.12 0.90 7.29 31.12 0.23 1.13 16 27 C -0.21 -1.77 9.04 22.37 0.20 -1.57 16 28 C -0.10 -0.91 8.66 22.25 0.19 -0.72 16 29 H 0.40 -4.14 8.74 -74.06 -0.65 -4.79 16 30 H 0.10 -0.41 7.96 -2.39 -0.02 -0.43 16 31 H -0.30 -2.47 7.05 99.48 0.70 -1.77 16 32 H -0.29 -1.71 7.11 99.48 0.71 -1.01 16 33 H 0.15 0.01 8.06 -2.91 -0.02 -0.02 16 34 H 0.15 0.09 8.06 -2.91 -0.02 0.07 16 35 H 0.06 0.28 7.61 -2.39 -0.02 0.26 16 36 H 0.06 0.26 7.63 -2.39 -0.02 0.24 16 37 H 0.13 -1.08 8.14 -2.39 -0.02 -1.10 16 38 H 0.13 -1.03 8.14 -2.39 -0.02 -1.05 16 39 H 0.42 -4.80 8.70 -92.71 -0.81 -5.61 16 40 H 0.10 -0.49 6.32 -2.39 -0.02 -0.51 16 41 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 42 H 0.15 -1.00 6.68 -2.91 -0.02 -1.02 16 43 H 0.15 -0.95 8.06 -2.91 -0.02 -0.97 16 44 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 45 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 46 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 47 H 0.10 -0.74 7.72 -2.39 -0.02 -0.76 16 48 H 0.14 0.92 6.30 -2.91 -0.02 0.90 16 49 H 0.12 0.98 4.86 -2.91 -0.01 0.96 16 Total: 0.00 -23.44 424.70 -0.55 -23.99 By element: Atomic # 1 Polarization: -18.71 SS G_CDS: -0.42 Total: -19.13 kcal Atomic # 6 Polarization: -0.58 SS G_CDS: 3.72 Total: 3.14 kcal Atomic # 7 Polarization: 3.66 SS G_CDS: -2.32 Total: 1.35 kcal Atomic # 8 Polarization: -7.66 SS G_CDS: -2.89 Total: -10.55 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: 2.05 Total: 2.06 kcal Atomic # 35 Polarization: -0.17 SS G_CDS: -0.69 Total: -0.86 kcal Total: -23.44 -0.55 -23.99 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.843 kcal (2) G-P(sol) polarization free energy of solvation -23.442 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.599 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.548 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.990 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds