Wall clock time and date at job start Sun Mar 7 2021 01:41:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86301 * 109.47040 * 2 1 4 4 C 1.50706 * 109.46702 * 240.00171 * 2 1 3 5 5 C 1.38253 * 119.96918 * 120.00058 * 4 2 1 6 6 C 1.38282 * 120.10829 * 180.02562 * 5 4 2 7 7 C 1.38125 * 120.05576 * 359.97438 * 6 5 4 8 8 C 1.38747 * 119.94695 * 359.97438 * 7 6 5 9 9 O 1.35902 * 120.05535 * 179.97438 * 8 7 6 10 10 C 1.42895 * 117.00228 * 0.02562 * 9 8 7 11 11 C 1.53000 * 109.47231 * 179.97438 * 10 9 8 12 12 C 1.50703 * 109.46859 * 179.97438 * 11 10 9 13 13 O 1.21272 * 120.00208 * 359.97438 * 12 11 10 14 14 N 1.34786 * 119.99623 * 180.02562 * 12 11 10 15 15 C 1.46499 * 119.99743 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.84925 * 23.79963 * 15 14 12 17 17 C 1.53780 * 113.61299 * 154.99714 * 15 14 12 18 18 C 1.53777 * 87.07853 * 89.11339 * 17 15 14 19 19 H 1.08997 * 113.61759 * 270.88204 * 18 17 15 20 20 C 1.50701 * 113.61143 * 140.06405 * 18 17 15 21 21 C 1.38224 * 119.99494 * 119.99971 * 20 18 17 22 22 C 1.38268 * 120.02077 * 179.97438 * 21 20 18 23 23 C 1.38194 * 120.00800 * 0.05088 * 22 21 20 24 24 C 1.38346 * 119.99057 * 359.97090 * 23 22 21 25 25 Br 1.89109 * 120.00830 * 180.02562 * 24 23 22 26 26 C 1.38241 * 119.99497 * 299.72158 * 20 18 17 27 27 C 1.53776 * 87.08436 * 25.43406 * 18 17 15 28 28 C 1.38161 * 119.97430 * 299.72266 * 4 2 1 29 29 H 0.96696 * 113.99911 * 59.99999 * 1 2 3 30 30 H 1.09000 * 109.46890 * 120.00330 * 2 1 3 31 31 H 1.48501 * 110.00188 * 298.68427 * 3 2 1 32 32 H 1.48498 * 109.99815 * 60.00030 * 3 2 1 33 33 H 1.07994 * 119.94384 * 359.97438 * 5 4 2 34 34 H 1.07999 * 119.96821 * 179.97438 * 6 5 4 35 35 H 1.08009 * 120.02497 * 179.97438 * 7 6 5 36 36 H 1.09007 * 109.46884 * 299.99637 * 10 9 8 37 37 H 1.08998 * 109.47408 * 59.99195 * 10 9 8 38 38 H 1.08991 * 109.47328 * 299.99564 * 11 10 9 39 39 H 1.08997 * 109.47011 * 59.99674 * 11 10 9 40 40 H 0.96998 * 119.99834 * 359.97438 * 14 12 11 41 41 H 1.08998 * 113.61272 * 203.66203 * 17 15 14 42 42 H 1.08998 * 113.61430 * 334.47934 * 17 15 14 43 43 H 1.07995 * 119.99056 * 359.97438 * 21 20 18 44 44 H 1.07998 * 119.99152 * 180.02562 * 22 21 20 45 45 H 1.07998 * 120.00244 * 179.97438 * 23 22 21 46 46 H 1.07996 * 120.00737 * 0.02562 * 26 20 18 47 47 H 1.09003 * 113.61450 * 220.02119 * 27 18 17 48 48 H 1.09004 * 113.61920 * 89.11394 * 27 18 17 49 49 H 1.08002 * 120.02889 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7261 -0.0379 -2.1402 6 6 3.1881 -0.6868 -3.2706 7 6 2.8568 -2.0091 -3.4932 8 6 2.0602 -2.6866 -2.5812 9 8 1.7324 -3.9875 -2.7983 10 6 2.2433 -4.5957 -3.9862 11 6 1.7730 -6.0499 -4.0574 12 6 2.3113 -6.6911 -5.3105 13 8 3.0025 -6.0482 -6.0718 14 7 2.0235 -7.9788 -5.5856 15 6 2.5473 -8.6023 -6.8034 16 1 3.4459 -8.1116 -7.1774 17 6 2.6756 -10.1317 -6.7063 18 6 1.2300 -10.2071 -7.2253 19 1 0.4802 -10.1820 -6.4346 20 6 1.0010 -11.3215 -8.2137 21 6 0.0757 -12.3105 -7.9378 22 6 -0.1353 -13.3329 -8.8445 23 6 0.5798 -13.3668 -10.0266 24 6 1.5063 -12.3773 -10.3029 25 35 2.4846 -12.4229 -11.9207 26 6 1.7122 -11.3512 -9.3988 27 6 1.4780 -8.8393 -7.8829 28 6 1.6019 -2.0348 -1.4458 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5139 0.8900 31 1 1.5879 2.4586 -1.2242 32 1 1.5615 2.4678 1.2085 33 1 2.9858 0.9961 -1.9681 34 1 3.8084 -0.1592 -3.9799 35 1 3.2176 -2.5154 -4.3764 36 1 1.8789 -4.0525 -4.8581 37 1 3.3328 -4.5670 -3.9695 38 1 2.1377 -6.5929 -3.1856 39 1 0.6835 -6.0789 -4.0740 40 1 1.4703 -8.4929 -4.9769 41 1 3.4090 -10.5529 -7.3939 42 1 2.7941 -10.4959 -5.6858 43 1 -0.4827 -12.2847 -7.0138 44 1 -0.8587 -14.1052 -8.6286 45 1 0.4152 -14.1656 -10.7345 46 1 2.4322 -10.5762 -9.6161 47 1 0.6282 -8.1604 -7.8122 48 1 1.8840 -8.9072 -8.8922 49 1 0.9844 -2.5609 -0.7328 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:41:08 Heat of formation + Delta-G solvation = -24.604757 kcal Electronic energy + Delta-G solvation = -30872.443760 eV Core-core repulsion = 26392.242012 eV Total energy + Delta-G solvation = -4480.201749 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.077 amu Computer time = 3.59 seconds Orbital eigenvalues (eV) -41.80884 -41.26933 -40.50434 -39.25679 -38.84038 -37.32924 -34.78350 -33.50407 -33.21884 -32.44139 -31.85876 -30.75436 -30.28736 -27.15134 -26.91485 -26.58396 -25.24730 -23.66235 -23.59933 -22.60967 -22.17605 -21.54327 -20.30684 -19.38692 -18.45018 -18.04014 -17.69715 -17.51379 -17.18537 -17.10719 -16.84878 -16.54220 -16.29884 -16.21412 -15.95288 -15.55414 -15.26520 -15.15961 -14.91843 -14.69901 -14.56853 -14.43843 -14.29224 -14.12906 -14.05118 -13.66901 -13.49409 -13.22927 -13.03967 -12.93558 -12.85168 -12.51881 -12.38672 -12.11513 -12.03444 -11.92495 -11.82731 -11.64414 -11.54380 -11.42431 -11.24515 -11.06503 -10.63945 -10.24530 -9.93077 -9.89072 -9.69596 -9.21782 -4.93655 0.01803 0.16444 0.24487 0.44177 0.61852 1.28208 1.44093 1.61476 1.62917 1.97626 2.39972 2.46629 2.70537 3.24723 3.38217 3.43729 3.45193 3.50711 3.64153 3.67726 3.75763 3.79705 3.82334 3.90229 3.90879 4.01885 4.07578 4.14369 4.23055 4.26939 4.28386 4.34357 4.43158 4.52758 4.54419 4.55161 4.55794 4.59947 4.67987 4.71406 4.78557 4.80965 4.84076 4.94704 5.00680 5.11831 5.23274 5.29707 5.35988 5.41126 5.45637 5.47406 5.70793 5.71194 6.26253 6.39301 6.41144 7.02331 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.688 3.312 4 C -0.081 4.081 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.524 3.476 13 O -0.535 6.535 14 N -0.712 5.712 15 C 0.119 3.881 16 H 0.108 0.892 17 C -0.135 4.135 18 C -0.074 4.074 19 H 0.101 0.899 20 C -0.066 4.066 21 C -0.101 4.101 22 C -0.110 4.110 23 C -0.095 4.095 24 C -0.087 4.087 25 Br -0.049 7.049 26 C -0.089 4.089 27 C -0.145 4.145 28 C -0.126 4.126 29 H 0.376 0.624 30 H 0.120 0.880 31 H -0.260 1.260 32 H -0.257 1.257 33 H 0.129 0.871 34 H 0.131 0.869 35 H 0.133 0.867 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.108 0.892 39 H 0.108 0.892 40 H 0.404 0.596 41 H 0.099 0.901 42 H 0.079 0.921 43 H 0.129 0.871 44 H 0.133 0.867 45 H 0.133 0.867 46 H 0.133 0.867 47 H 0.076 0.924 48 H 0.096 0.904 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.098 -2.657 1.444 3.026 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.185 4.185 3 Si 0.589 3.411 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.181 4.181 12 C 0.310 3.690 13 O -0.411 6.411 14 N -0.363 5.363 15 C 0.013 3.987 16 H 0.126 0.874 17 C -0.173 4.173 18 C -0.092 4.092 19 H 0.119 0.881 20 C -0.067 4.067 21 C -0.119 4.119 22 C -0.129 4.129 23 C -0.115 4.115 24 C -0.167 4.167 25 Br 0.037 6.963 26 C -0.109 4.109 27 C -0.183 4.183 28 C -0.144 4.144 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.185 1.185 32 H -0.182 1.182 33 H 0.146 0.854 34 H 0.149 0.851 35 H 0.150 0.850 36 H 0.091 0.909 37 H 0.092 0.908 38 H 0.127 0.873 39 H 0.126 0.874 40 H 0.238 0.762 41 H 0.118 0.882 42 H 0.098 0.902 43 H 0.147 0.853 44 H 0.151 0.849 45 H 0.151 0.849 46 H 0.151 0.849 47 H 0.095 0.905 48 H 0.114 0.886 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.738 -1.809 0.945 2.171 hybrid contribution -1.526 -0.645 -0.225 1.672 sum -0.788 -2.454 0.720 2.676 Atomic orbital electron populations 1.86603 1.17576 1.80005 1.49314 1.25078 0.84065 1.11091 0.98308 0.94887 0.91756 0.74205 0.80204 1.20072 0.97678 0.93809 0.96566 1.20929 1.00768 1.00030 0.95488 1.20929 0.97829 0.93697 0.96663 1.21400 1.03069 0.96501 1.01093 1.18951 0.94702 0.83184 0.94466 1.85972 1.71188 1.22810 1.43055 1.22412 0.99398 0.92034 0.86278 1.21468 1.03941 0.95480 0.97256 1.20307 0.80000 0.81751 0.86925 1.90757 1.37895 1.62368 1.50068 1.45628 1.53849 1.12160 1.24693 1.21866 0.97985 0.93536 0.85271 0.87447 1.23435 0.96354 0.94753 1.02803 1.21622 0.97909 0.92788 0.96879 0.88064 1.19675 0.96199 0.96202 0.94612 1.21225 0.97283 0.93858 0.99548 1.21212 0.99426 0.98733 0.93529 1.21178 0.94840 0.97696 0.97774 1.21836 1.00732 0.99593 0.94501 1.96793 1.72561 1.98767 1.28185 1.20972 0.99707 0.97275 0.92909 1.23580 0.99823 0.95804 0.99098 1.20238 1.03220 0.93966 0.97009 0.77598 0.86202 1.18481 1.18219 0.85394 0.85145 0.84968 0.90929 0.90845 0.87346 0.87413 0.76153 0.88233 0.90218 0.85350 0.84935 0.84932 0.84884 0.90484 0.88558 0.84829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 34. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.85 12.77 -35.23 -0.45 -1.30 16 2 C -0.08 -0.01 2.82 36.01 0.10 0.09 16 3 Si 0.69 -0.50 29.79 -169.99 -5.06 -5.57 16 4 C -0.08 -0.07 5.39 -104.64 -0.56 -0.63 16 5 C -0.15 -0.03 8.67 -39.56 -0.34 -0.37 16 6 C -0.07 -0.02 10.04 -39.61 -0.40 -0.42 16 7 C -0.20 -0.24 9.04 -39.43 -0.36 -0.59 16 8 C 0.13 0.28 6.69 -39.22 -0.26 0.01 16 9 O -0.32 -0.54 10.14 -19.43 -0.20 -0.73 16 10 C 0.07 0.00 4.03 37.16 0.15 0.15 16 11 C -0.14 0.32 6.07 -27.88 -0.17 0.15 16 12 C 0.52 -0.18 7.83 -10.98 -0.09 -0.26 16 13 O -0.53 -2.00 15.58 5.56 0.09 -1.91 16 14 N -0.71 1.89 5.26 -53.02 -0.28 1.61 16 15 C 0.12 -0.23 4.32 -67.12 -0.29 -0.52 16 16 H 0.11 -0.01 7.47 -51.93 -0.39 -0.40 16 17 C -0.14 0.43 7.29 -25.92 -0.19 0.24 16 18 C -0.07 0.22 3.85 -90.96 -0.35 -0.13 16 19 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 20 C -0.07 0.08 5.29 -104.63 -0.55 -0.47 16 21 C -0.10 0.15 9.71 -39.58 -0.38 -0.24 16 22 C -0.11 0.12 10.05 -39.59 -0.40 -0.28 16 23 C -0.10 0.01 9.79 -39.56 -0.39 -0.38 16 24 C -0.09 -0.06 6.22 -39.52 -0.25 -0.30 16 25 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.35 16 26 C -0.09 0.03 8.37 -39.56 -0.33 -0.30 16 27 C -0.14 0.30 7.25 -25.92 -0.19 0.11 16 28 C -0.13 -0.24 9.56 -39.44 -0.38 -0.62 16 29 H 0.38 -0.44 8.70 45.56 0.40 -0.04 16 30 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 31 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 32 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 33 H 0.13 -0.21 4.87 -52.49 -0.26 -0.47 16 34 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 35 H 0.13 0.03 6.30 -52.48 -0.33 -0.30 16 36 H 0.07 0.03 7.62 -51.92 -0.40 -0.36 16 37 H 0.07 0.02 7.62 -51.93 -0.40 -0.37 16 38 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 39 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 40 H 0.40 -2.13 8.70 -40.82 -0.36 -2.49 16 41 H 0.10 -0.28 7.73 -51.93 -0.40 -0.68 16 42 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 43 H 0.13 -0.43 8.05 -52.49 -0.42 -0.85 16 44 H 0.13 -0.39 8.06 -52.49 -0.42 -0.82 16 45 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 46 H 0.13 -0.15 6.65 -52.49 -0.35 -0.50 16 47 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 48 H 0.10 -0.18 6.31 -51.93 -0.33 -0.51 16 49 H 0.13 0.25 8.06 -52.49 -0.42 -0.18 16 LS Contribution 424.60 15.07 6.40 6.40 Total: 0.00 -8.13 424.60 -14.06 -22.19 By element: Atomic # 1 Polarization: -6.93 SS G_CDS: -6.64 Total: -13.57 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -5.62 Total: -4.77 kcal Atomic # 7 Polarization: 1.89 SS G_CDS: -0.28 Total: 1.61 kcal Atomic # 8 Polarization: -3.38 SS G_CDS: -0.56 Total: -3.94 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.06 Total: -5.57 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -8.13 -14.06 -22.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.417 kcal (2) G-P(sol) polarization free energy of solvation -8.132 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.188 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.605 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.59 seconds