Wall clock time and date at job start Sun Mar 7 2021 01:41:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86297 * 109.47176 * 2 1 4 4 C 1.50697 * 109.47041 * 239.99893 * 2 1 3 5 5 C 1.38245 * 119.94695 * 300.00251 * 4 2 1 6 6 C 1.38167 * 120.06071 * 179.97438 * 5 4 2 7 7 N 1.48002 * 120.03065 * 179.97438 * 6 5 4 8 8 O 1.21798 * 119.99920 * 0.03299 * 7 6 5 9 9 O 1.21796 * 119.99696 * 180.02562 * 7 6 5 10 10 C 1.38719 * 119.93738 * 0.02562 * 6 5 4 11 11 O 1.35900 * 120.04824 * 180.02562 * 10 6 5 12 12 C 1.42901 * 116.99753 * 179.97438 * 11 10 6 13 13 C 1.50700 * 109.47465 * 180.02562 * 12 11 10 14 14 O 1.21276 * 119.99590 * 359.97438 * 13 12 11 15 15 N 1.34774 * 120.00055 * 180.02562 * 13 12 11 16 16 C 1.46504 * 119.99872 * 179.97438 * 15 13 12 17 17 H 1.09000 * 112.84684 * 336.19503 * 16 15 13 18 18 C 1.53778 * 113.61326 * 107.49964 * 16 15 13 19 19 C 1.53779 * 87.08269 * 89.11442 * 18 16 15 20 20 H 1.08995 * 113.61603 * 270.88646 * 19 18 16 21 21 C 1.50707 * 113.69052 * 139.98844 * 19 18 16 22 22 C 1.38222 * 119.99302 * 322.18966 * 21 19 18 23 23 C 1.38257 * 120.01466 * 179.76670 * 22 21 19 24 24 C 1.38194 * 120.01346 * 0.51236 * 23 22 21 25 25 C 1.38347 * 119.99066 * 359.74382 * 24 23 22 26 26 Br 1.89101 * 120.01388 * 180.02562 * 25 24 23 27 27 C 1.38232 * 119.99339 * 142.47172 * 21 19 18 28 28 C 1.53778 * 113.61310 * 204.99696 * 16 15 13 29 29 C 1.38750 * 119.89157 * 359.97438 * 10 6 5 30 30 C 1.38125 * 119.94353 * 0.25901 * 29 10 6 31 31 H 0.96693 * 113.99634 * 300.00081 * 1 2 3 32 32 H 1.08996 * 109.46824 * 120.00441 * 2 1 3 33 33 H 1.48495 * 109.99978 * 299.99867 * 3 2 1 34 34 H 1.48502 * 110.00079 * 61.32090 * 3 2 1 35 35 H 1.08006 * 119.97024 * 0.02562 * 5 4 2 36 36 H 1.09006 * 109.47006 * 300.00233 * 12 11 10 37 37 H 1.09002 * 109.47291 * 59.99876 * 12 11 10 38 38 H 0.96995 * 120.00346 * 359.97438 * 15 13 12 39 39 H 1.09004 * 113.61568 * 203.66799 * 18 16 15 40 40 H 1.09004 * 113.62018 * 334.56601 * 18 16 15 41 41 H 1.07995 * 119.99252 * 0.02777 * 22 21 19 42 42 H 1.08001 * 119.99441 * 180.23894 * 23 22 21 43 43 H 1.08002 * 120.00983 * 179.77077 * 24 23 22 44 44 H 1.08007 * 120.00742 * 359.95428 * 27 21 19 45 45 H 1.08996 * 113.61373 * 25.43755 * 28 16 15 46 46 H 1.09005 * 113.61130 * 156.25567 * 28 16 15 47 47 H 1.08002 * 120.02434 * 179.97438 * 29 10 6 48 48 H 1.08004 * 119.96955 * 179.74781 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5967 -2.0340 -1.4481 6 6 2.0555 -2.6874 -2.5757 7 7 1.6972 -4.1046 -2.8078 8 8 0.9971 -4.6951 -2.0049 9 8 2.1024 -4.6802 -3.8018 10 6 2.8531 -2.0143 -3.4895 11 8 3.3052 -2.6548 -4.5996 12 6 4.1213 -1.8994 -5.4972 13 6 4.5248 -2.7677 -6.6609 14 8 4.1507 -3.9200 -6.7160 15 7 5.3021 -2.2640 -7.6399 16 6 5.6948 -3.1083 -8.7709 17 1 5.6694 -4.1719 -8.5340 18 6 4.9792 -2.7506 -10.0843 19 6 6.1297 -1.7657 -10.3512 20 1 5.9565 -0.7706 -9.9417 21 6 6.5806 -1.7366 -11.7890 22 6 6.6257 -2.9071 -12.5227 23 6 7.0347 -2.8803 -13.8432 24 6 7.4086 -1.6847 -14.4268 25 6 7.3686 -0.5137 -13.6912 26 35 7.8794 1.1227 -14.4894 27 6 6.9545 -0.5403 -12.3719 28 6 6.9990 -2.6595 -9.4510 29 6 3.1876 -0.6860 -3.2688 30 6 2.7304 -0.0387 -2.1375 31 1 -0.3932 0.4417 0.7650 32 1 1.7923 -0.5139 0.8899 33 1 1.5616 2.4678 -1.2085 34 1 1.5880 2.4585 1.2243 35 1 0.9753 -2.5574 -0.7365 36 1 3.5595 -1.0399 -5.8631 37 1 5.0133 -1.5545 -4.9743 38 1 5.6016 -1.3425 -7.5956 39 1 4.9358 -3.5747 -10.7963 40 1 4.0142 -2.2653 -9.9377 41 1 6.3375 -3.8422 -12.0658 42 1 7.0662 -3.7944 -14.4173 43 1 7.7316 -1.6644 -15.4572 44 1 6.9228 0.3737 -11.7972 45 1 7.6646 -2.1009 -8.7931 46 1 7.5085 -3.4591 -9.9888 47 1 3.8088 -0.1600 -3.9786 48 1 2.9939 0.9941 -1.9632 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:41:52 Heat of formation + Delta-G solvation = -6.052025 kcal Electronic energy + Delta-G solvation = -35870.163086 eV Core-core repulsion = 30715.287027 eV Total energy + Delta-G solvation = -5154.876058 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 463.055 amu Computer time = 1.79 seconds Orbital eigenvalues (eV) -43.29050 -41.86453 -41.42685 -40.43148 -39.47949 -38.68109 -37.62646 -37.48703 -34.77124 -33.51876 -33.16132 -32.36972 -32.10014 -30.23810 -29.68815 -27.81625 -26.68404 -26.65533 -26.05266 -24.15725 -23.52925 -22.85804 -22.49006 -21.87734 -20.46840 -20.06180 -19.77698 -19.07210 -18.73130 -18.61427 -18.48166 -17.97396 -17.55581 -17.38119 -16.91931 -16.51612 -16.40699 -16.15689 -15.93407 -15.74591 -15.56826 -15.33328 -15.09280 -14.67041 -14.50595 -14.36376 -14.24330 -14.14442 -13.89560 -13.74400 -13.46086 -13.37800 -13.14307 -12.89765 -12.71251 -12.69171 -12.34731 -12.31734 -12.27055 -12.12293 -12.00130 -11.91808 -11.89178 -11.52782 -11.35346 -11.15189 -11.02387 -10.82263 -10.61407 -10.14497 -9.83906 -9.76100 -9.59959 -4.92869 -1.30248 -0.23108 0.10342 0.16570 0.29103 0.35650 0.64807 1.20754 1.26495 1.45544 1.63602 1.98409 2.03532 2.31978 2.58232 3.06862 3.22631 3.31333 3.46423 3.54191 3.59711 3.63460 3.71076 3.71631 3.87716 3.89196 3.96157 3.97183 4.05124 4.11971 4.12901 4.24571 4.30652 4.33422 4.42930 4.52144 4.63097 4.65434 4.68955 4.79123 4.85732 4.86712 4.95221 4.99802 5.03976 5.08125 5.14844 5.19672 5.22939 5.37512 5.46993 5.63931 5.77023 5.84866 6.43297 6.46097 6.53250 7.17119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.095 4.095 3 Si 0.787 3.213 4 C -0.112 4.112 5 C -0.005 4.005 6 C -0.105 4.105 7 N 0.035 4.965 8 O -0.204 6.204 9 O -0.171 6.171 10 C 0.194 3.806 11 O -0.291 6.291 12 C 0.023 3.977 13 C 0.511 3.489 14 O -0.564 6.564 15 N -0.690 5.690 16 C 0.116 3.884 17 H 0.082 0.918 18 C -0.144 4.144 19 C -0.064 4.064 20 H 0.119 0.881 21 C -0.067 4.067 22 C -0.107 4.107 23 C -0.116 4.116 24 C -0.109 4.109 25 C -0.103 4.103 26 Br -0.061 7.061 27 C -0.095 4.095 28 C -0.122 4.122 29 C -0.187 4.187 30 C -0.007 4.007 31 H 0.399 0.601 32 H 0.099 0.901 33 H -0.280 1.280 34 H -0.292 1.292 35 H 0.150 0.850 36 H 0.143 0.857 37 H 0.149 0.851 38 H 0.423 0.577 39 H 0.095 0.905 40 H 0.069 0.931 41 H 0.144 0.856 42 H 0.148 0.852 43 H 0.135 0.865 44 H 0.142 0.858 45 H 0.094 0.906 46 H 0.099 0.901 47 H 0.209 0.791 48 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.529 11.667 2.089 14.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.202 4.202 3 Si 0.689 3.311 4 C -0.114 4.114 5 C -0.024 4.024 6 C -0.191 4.191 7 N 0.545 4.455 8 O -0.411 6.411 9 O -0.386 6.386 10 C 0.144 3.856 11 O -0.201 6.201 12 C -0.054 4.054 13 C 0.297 3.703 14 O -0.441 6.441 15 N -0.345 5.345 16 C 0.010 3.990 17 H 0.100 0.900 18 C -0.183 4.183 19 C -0.082 4.082 20 H 0.137 0.863 21 C -0.068 4.068 22 C -0.125 4.125 23 C -0.134 4.134 24 C -0.129 4.129 25 C -0.182 4.182 26 Br 0.024 6.976 27 C -0.115 4.115 28 C -0.160 4.160 29 C -0.206 4.206 30 C -0.024 4.024 31 H 0.250 0.750 32 H 0.117 0.883 33 H -0.207 1.207 34 H -0.219 1.219 35 H 0.168 0.832 36 H 0.160 0.840 37 H 0.166 0.834 38 H 0.262 0.738 39 H 0.113 0.887 40 H 0.088 0.912 41 H 0.162 0.838 42 H 0.165 0.835 43 H 0.153 0.847 44 H 0.160 0.840 45 H 0.113 0.887 46 H 0.118 0.882 47 H 0.226 0.774 48 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 7.458 12.390 1.254 14.515 hybrid contribution -1.662 -1.090 0.436 2.035 sum 5.796 11.300 1.690 12.811 Atomic orbital electron populations 1.86545 1.18469 1.81003 1.51289 1.25241 0.84368 1.13099 0.97449 0.94240 0.89248 0.70163 0.77422 1.19465 1.01140 0.91990 0.98764 1.20828 0.93941 0.94854 0.92782 1.20846 1.13487 0.81614 1.03115 1.43861 0.98217 1.03923 0.99463 1.94497 1.36104 1.68308 1.42190 1.94672 1.56280 1.69305 1.18305 1.18935 0.89678 0.92024 0.84955 1.86468 1.63725 1.39701 1.30207 1.23147 0.98317 0.94439 0.89464 1.20493 0.78427 0.87609 0.83797 1.90852 1.54751 1.20261 1.78281 1.45282 1.51429 1.16503 1.21272 1.21830 0.96450 0.95512 0.85194 0.89980 1.23575 0.98030 0.99701 0.96964 1.21636 0.96220 1.00207 0.90111 0.86298 1.19862 0.98312 0.92311 0.96266 1.21440 0.97953 0.98964 0.94126 1.21444 0.98232 0.98084 0.95662 1.21336 0.99443 0.91563 1.00551 1.21972 1.07239 0.92105 0.96910 1.96761 1.90948 1.27591 1.82260 1.21197 0.98149 0.99312 0.92802 1.23372 0.95305 0.99827 0.97464 1.21797 1.06208 0.90493 1.02067 1.21671 0.89930 1.01043 0.89774 0.74969 0.88292 1.20692 1.21898 0.83185 0.83996 0.83388 0.73836 0.88662 0.91205 0.83848 0.83474 0.84678 0.83971 0.88710 0.88233 0.77398 0.79607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.01 12.74 -148.98 -1.90 -0.89 16 2 C -0.09 0.61 2.81 71.23 0.20 0.81 16 3 Si 0.79 -8.01 29.78 68.60 2.04 -5.97 16 4 C -0.11 0.41 5.42 -19.85 -0.11 0.30 16 5 C 0.00 -0.02 9.11 22.25 0.20 0.19 16 6 C -0.11 -0.84 6.87 36.48 0.25 -0.59 16 7 N 0.04 0.61 4.45 -46.24 -0.21 0.40 16 8 O -0.20 -3.90 18.45 18.89 0.35 -3.55 16 9 O -0.17 -3.74 17.24 25.61 0.44 -3.30 16 10 C 0.19 0.21 6.67 22.51 0.15 0.36 16 11 O -0.29 -1.25 7.68 -63.40 -0.49 -1.74 16 12 C 0.02 -0.19 5.22 71.24 0.37 0.18 16 13 C 0.51 -0.10 7.91 87.66 0.69 0.59 16 14 O -0.56 -7.83 16.10 16.02 0.26 -7.57 16 15 N -0.69 5.51 5.26 -440.05 -2.32 3.19 16 16 C 0.12 -0.57 4.32 45.52 0.20 -0.37 16 17 H 0.08 0.11 7.46 -2.39 -0.02 0.09 16 18 C -0.14 0.79 7.26 31.12 0.23 1.01 16 19 C -0.06 0.55 3.85 -11.01 -0.04 0.50 16 20 H 0.12 -1.45 8.09 -2.39 -0.02 -1.47 16 21 C -0.07 0.29 5.29 -19.87 -0.11 0.18 16 22 C -0.11 0.41 8.60 22.27 0.19 0.60 16 23 C -0.12 0.30 10.05 22.26 0.22 0.52 16 24 C -0.11 0.02 9.79 22.29 0.22 0.24 16 25 C -0.10 -0.07 6.22 22.31 0.14 0.07 16 26 Br -0.06 -0.10 33.70 -20.37 -0.69 -0.79 16 27 C -0.09 0.21 9.45 22.28 0.21 0.42 16 28 C -0.12 1.11 7.29 31.12 0.23 1.33 16 29 C -0.19 1.88 9.04 22.37 0.20 2.08 16 30 C -0.01 0.07 8.66 22.25 0.19 0.26 16 31 H 0.40 -3.78 8.74 -74.06 -0.65 -4.43 16 32 H 0.10 -0.94 7.96 -2.39 -0.02 -0.96 16 33 H -0.28 1.42 7.11 99.48 0.71 2.13 16 34 H -0.29 1.15 7.11 99.48 0.71 1.86 16 35 H 0.15 0.72 7.61 -2.91 -0.02 0.70 16 36 H 0.14 -2.33 7.66 -2.38 -0.02 -2.35 16 37 H 0.15 -2.58 7.66 -2.39 -0.02 -2.60 16 38 H 0.42 -7.02 8.70 -92.71 -0.81 -7.83 16 39 H 0.10 -0.47 6.33 -2.39 -0.02 -0.49 16 40 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 41 H 0.14 -0.99 6.68 -2.91 -0.02 -1.01 16 42 H 0.15 -0.91 8.06 -2.91 -0.02 -0.94 16 43 H 0.14 -0.23 8.06 -2.91 -0.02 -0.26 16 44 H 0.14 -0.73 8.06 -2.91 -0.02 -0.75 16 45 H 0.09 -1.10 8.14 -2.39 -0.02 -1.12 16 46 H 0.10 -0.82 7.72 -2.38 -0.02 -0.84 16 47 H 0.21 -4.32 6.30 -2.91 -0.02 -4.34 16 48 H 0.19 -3.25 4.88 -2.91 -0.01 -3.26 16 Total: 0.00 -40.47 429.72 0.79 -39.68 By element: Atomic # 1 Polarization: -27.81 SS G_CDS: -0.35 Total: -28.16 kcal Atomic # 6 Polarization: 5.05 SS G_CDS: 3.64 Total: 8.69 kcal Atomic # 7 Polarization: 6.11 SS G_CDS: -2.52 Total: 3.59 kcal Atomic # 8 Polarization: -15.71 SS G_CDS: -1.34 Total: -17.05 kcal Atomic # 14 Polarization: -8.01 SS G_CDS: 2.04 Total: -5.97 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -0.69 Total: -0.79 kcal Total: -40.47 0.79 -39.68 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.626 kcal (2) G-P(sol) polarization free energy of solvation -40.466 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.840 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.788 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.79 seconds