Wall clock time and date at job start Sun Mar 7 2021 01:42:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.38250 * 119.96908 * 244.99614 * 4 2 1 6 6 C 1.38284 * 120.11066 * 180.02562 * 5 4 2 7 7 C 1.38117 * 120.05627 * 359.97438 * 6 5 4 8 8 C 1.38754 * 119.94464 * 359.97438 * 7 6 5 9 9 O 1.35907 * 120.05475 * 180.02562 * 8 7 6 10 10 C 1.42902 * 117.00106 * 359.97438 * 9 8 7 11 11 C 1.50694 * 109.46998 * 179.97438 * 10 9 8 12 12 O 1.21277 * 119.99989 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99998 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99779 * 180.02562 * 13 11 10 15 15 H 1.08993 * 112.85497 * 334.66086 * 14 13 11 16 16 C 1.53782 * 113.61492 * 105.86547 * 14 13 11 17 17 C 1.54056 * 86.98433 * 89.15760 * 16 14 13 18 18 H 1.09000 * 113.69087 * 270.87155 * 17 16 14 19 19 C 1.50700 * 113.61528 * 139.98158 * 17 16 14 20 20 C 1.38214 * 119.99925 * 322.22308 * 19 17 16 21 21 C 1.38258 * 120.02386 * 179.77026 * 20 19 17 22 22 C 1.38196 * 120.01073 * 0.51137 * 21 20 19 23 23 C 1.38350 * 119.98808 * 359.74186 * 22 21 20 24 24 Br 1.89098 * 120.01149 * 179.97438 * 23 22 21 25 25 C 1.38242 * 119.99273 * 142.50345 * 19 17 16 26 26 C 1.53778 * 87.07859 * 25.43293 * 17 16 14 27 27 C 1.38159 * 119.97612 * 64.72274 * 4 2 1 28 28 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 29 29 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 30 30 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 31 31 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 32 32 H 1.08005 * 119.94240 * 359.97438 * 5 4 2 33 33 H 1.07997 * 119.97314 * 179.97438 * 6 5 4 34 34 H 1.08003 * 120.02797 * 179.97438 * 7 6 5 35 35 H 1.08993 * 109.47215 * 300.00187 * 10 9 8 36 36 H 1.09007 * 109.46520 * 60.00277 * 10 9 8 37 37 H 0.96997 * 119.99521 * 0.02562 * 13 11 10 38 38 H 1.09000 * 113.61528 * 203.66085 * 16 14 13 39 39 H 1.09004 * 113.61592 * 334.56545 * 16 14 13 40 40 H 1.08005 * 119.99013 * 0.02562 * 20 19 17 41 41 H 1.08003 * 119.99614 * 180.23334 * 21 20 19 42 42 H 1.07999 * 120.00752 * 179.77237 * 22 21 20 43 43 H 1.08000 * 120.00767 * 359.97438 * 25 19 17 44 44 H 1.08997 * 113.61118 * 220.02472 * 26 17 16 45 45 H 1.08996 * 113.61476 * 89.12045 * 26 17 16 46 46 H 1.08008 * 120.02458 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.6388 -0.0118 2.1909 6 6 3.1016 -0.6611 3.3207 7 6 2.8574 -2.0096 3.4925 8 6 2.1467 -2.7128 2.5305 9 8 1.9047 -4.0397 2.6975 10 6 2.4120 -4.6470 3.8874 11 6 2.0489 -6.1095 3.8991 12 8 1.4183 -6.5850 2.9788 13 7 2.4250 -6.8890 4.9322 14 6 2.0725 -8.3109 4.9433 15 1 1.1849 -8.5315 4.3504 16 6 3.2594 -9.2422 4.6455 17 6 3.5336 -9.2436 6.1614 18 1 4.1955 -8.4413 6.4876 19 6 3.9383 -10.5915 6.7005 20 6 3.3471 -11.7391 6.2067 21 6 3.7214 -12.9762 6.6975 22 6 4.6793 -13.0653 7.6896 23 6 5.2677 -11.9166 8.1879 24 35 6.5780 -12.0376 9.5459 25 6 4.8967 -10.6795 7.6929 26 6 2.0410 -8.9268 6.3521 27 6 1.6796 -2.0583 1.4002 28 1 -0.3934 0.4418 -0.7650 29 1 1.7923 -0.5137 -0.8901 30 1 1.5616 2.4678 1.2086 31 1 3.5346 1.7703 -0.0322 32 1 2.8311 1.0426 2.0581 33 1 3.6543 -0.1132 4.0695 34 1 3.2194 -2.5163 4.3750 35 1 3.4965 -4.5412 3.9154 36 1 1.9766 -4.1579 4.7589 37 1 2.9291 -6.5085 5.6684 38 1 2.9633 -10.2156 4.2544 39 1 4.0476 -8.7709 4.0582 40 1 2.5954 -11.6697 5.4343 41 1 3.2618 -13.8730 6.3087 42 1 4.9690 -14.0315 8.0755 43 1 5.3557 -9.7825 8.0816 44 1 1.8461 -8.2010 7.1416 45 1 1.4123 -9.8140 6.4268 46 1 1.1234 -2.6028 0.6514 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:13 Heat of formation + Delta-G solvation = -12.093414 kcal Electronic energy + Delta-G solvation = -29228.152390 eV Core-core repulsion = 24904.030793 eV Total energy + Delta-G solvation = -4324.121597 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 2.60 seconds Orbital eigenvalues (eV) -41.86258 -41.33841 -40.38382 -39.22660 -38.55326 -37.26723 -34.82156 -33.24635 -32.63754 -32.31847 -31.63054 -30.22380 -29.32911 -26.92358 -26.85728 -26.21249 -23.72710 -23.68152 -23.07556 -22.38784 -21.62641 -20.23888 -19.24065 -18.47808 -18.41312 -18.03555 -17.57292 -17.50028 -17.16862 -16.85174 -16.47654 -16.28910 -15.86007 -15.69345 -15.45698 -15.16602 -15.02525 -14.66670 -14.59104 -14.57442 -14.39896 -14.24951 -13.82796 -13.77279 -13.64407 -13.45401 -13.23516 -13.03350 -12.46928 -12.37922 -12.22645 -12.12798 -12.09875 -12.07533 -11.80828 -11.65013 -11.47576 -11.22326 -10.97050 -10.38690 -10.26489 -9.94877 -9.93352 -9.68838 -9.30883 -4.97948 0.00876 0.15759 0.17386 0.35570 0.61305 1.22156 1.38125 1.40257 1.63362 1.95873 2.46155 2.46470 2.59709 3.22965 3.34825 3.39032 3.43325 3.50710 3.67667 3.69947 3.76855 3.76891 3.84752 3.85436 3.90767 3.94653 3.96411 4.14630 4.15844 4.20619 4.29050 4.45355 4.47034 4.51282 4.54717 4.57415 4.65211 4.76537 4.81258 4.83301 4.91968 4.92827 5.11695 5.17144 5.23793 5.28905 5.32108 5.40108 5.45900 5.59048 5.70747 6.16877 6.31721 6.61597 7.01449 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.075 4.075 3 Si 0.688 3.312 4 C -0.035 4.035 5 C -0.160 4.160 6 C -0.071 4.071 7 C -0.206 4.206 8 C 0.131 3.869 9 O -0.287 6.287 10 C 0.040 3.960 11 C 0.519 3.481 12 O -0.508 6.508 13 N -0.711 5.711 14 C 0.121 3.879 15 H 0.108 0.892 16 C -0.143 4.143 17 C -0.074 4.074 18 H 0.100 0.900 19 C -0.066 4.066 20 C -0.102 4.102 21 C -0.109 4.109 22 C -0.095 4.095 23 C -0.088 4.088 24 Br -0.050 7.050 25 C -0.088 4.088 26 C -0.134 4.134 27 C -0.117 4.117 28 H 0.383 0.617 29 H 0.077 0.923 30 H -0.250 1.250 31 H -0.254 1.254 32 H 0.121 0.879 33 H 0.131 0.869 34 H 0.132 0.868 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.403 0.597 38 H 0.098 0.902 39 H 0.077 0.923 40 H 0.131 0.869 41 H 0.133 0.867 42 H 0.133 0.867 43 H 0.131 0.869 44 H 0.079 0.921 45 H 0.101 0.899 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.016 1.864 0.362 2.153 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.185 4.185 3 Si 0.589 3.411 4 C -0.035 4.035 5 C -0.178 4.178 6 C -0.089 4.089 7 C -0.225 4.225 8 C 0.085 3.915 9 O -0.199 6.199 10 C -0.039 4.039 11 C 0.304 3.696 12 O -0.381 6.381 13 N -0.365 5.365 14 C 0.016 3.984 15 H 0.126 0.874 16 C -0.182 4.182 17 C -0.093 4.093 18 H 0.118 0.882 19 C -0.067 4.067 20 C -0.120 4.120 21 C -0.128 4.128 22 C -0.115 4.115 23 C -0.167 4.167 24 Br 0.036 6.964 25 C -0.108 4.108 26 C -0.172 4.172 27 C -0.135 4.135 28 H 0.231 0.769 29 H 0.095 0.905 30 H -0.175 1.175 31 H -0.179 1.179 32 H 0.138 0.862 33 H 0.149 0.851 34 H 0.149 0.851 35 H 0.113 0.887 36 H 0.113 0.887 37 H 0.238 0.762 38 H 0.116 0.884 39 H 0.095 0.905 40 H 0.149 0.851 41 H 0.151 0.849 42 H 0.151 0.849 43 H 0.149 0.851 44 H 0.098 0.902 45 H 0.119 0.881 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.507 1.623 1.037 2.445 hybrid contribution 0.335 -0.382 0.640 0.817 sum 1.842 1.241 1.677 2.783 Atomic orbital electron populations 1.86507 1.16945 1.81868 1.49704 1.24742 0.85965 1.10552 0.97253 0.95287 0.80691 0.77842 0.87238 1.19134 0.96735 0.92932 0.94694 1.20831 1.02384 0.99233 0.95325 1.20851 0.97619 0.93717 0.96752 1.21273 1.04836 0.95894 1.00453 1.19004 0.95251 0.82441 0.94766 1.86171 1.73708 1.19994 1.40053 1.22460 1.00700 0.91809 0.88898 1.20022 0.79684 0.87377 0.82524 1.90793 1.37774 1.74734 1.34809 1.45476 1.58333 1.09228 1.23457 1.21863 0.99017 0.79370 0.98138 0.87411 1.23633 0.98761 1.00701 0.95093 1.21676 0.96965 0.94193 0.96420 0.88195 1.19671 0.96027 0.94986 0.95979 1.21182 0.99430 0.91870 0.99526 1.21207 0.97048 0.98161 0.96392 1.21182 0.96164 0.97525 0.96599 1.21848 0.99521 0.96329 0.99023 1.96786 1.52065 1.98910 1.48640 1.21018 0.97138 0.96262 0.96344 1.23432 0.95634 1.01691 0.96433 1.20252 1.02347 0.93559 0.97362 0.76892 0.90488 1.17501 1.17934 0.86174 0.85091 0.85058 0.88675 0.88656 0.76245 0.88395 0.90458 0.85149 0.84878 0.84929 0.85092 0.90212 0.88059 0.84410 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.48 12.81 -35.23 -0.45 -0.93 16 2 C -0.07 -0.04 2.79 36.00 0.10 0.06 16 3 Si 0.69 -0.61 29.85 -169.99 -5.07 -5.69 16 4 C -0.03 -0.10 5.38 -104.65 -0.56 -0.67 16 5 C -0.16 -0.40 8.67 -39.56 -0.34 -0.74 16 6 C -0.07 -0.08 10.04 -39.61 -0.40 -0.48 16 7 C -0.21 -0.19 9.04 -39.44 -0.36 -0.54 16 8 C 0.13 0.39 6.69 -39.22 -0.26 0.13 16 9 O -0.29 -1.01 9.67 -39.36 -0.38 -1.39 16 10 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 11 C 0.52 0.62 7.91 -10.99 -0.09 0.53 16 12 O -0.51 -3.18 16.12 -14.35 -0.23 -3.41 16 13 N -0.71 1.56 5.26 -53.02 -0.28 1.28 16 14 C 0.12 -0.21 4.30 -67.11 -0.29 -0.50 16 15 H 0.11 0.01 7.50 -51.93 -0.39 -0.37 16 16 C -0.14 0.30 7.27 -25.77 -0.19 0.12 16 17 C -0.07 0.22 3.87 -90.82 -0.35 -0.14 16 18 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 19 C -0.07 0.08 5.29 -104.63 -0.55 -0.47 16 20 C -0.10 0.14 8.60 -39.58 -0.34 -0.20 16 21 C -0.11 0.11 10.05 -39.59 -0.40 -0.29 16 22 C -0.09 0.00 9.79 -39.56 -0.39 -0.39 16 23 C -0.09 -0.06 6.22 -39.51 -0.25 -0.31 16 24 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.34 16 25 C -0.09 0.02 9.45 -39.55 -0.37 -0.35 16 26 C -0.13 0.43 7.29 -25.92 -0.19 0.25 16 27 C -0.12 -0.43 9.62 -39.44 -0.38 -0.81 16 28 H 0.38 -1.66 8.74 45.56 0.40 -1.27 16 29 H 0.08 -0.08 7.96 -51.93 -0.41 -0.50 16 30 H -0.25 -0.54 7.05 56.52 0.40 -0.14 16 31 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 32 H 0.12 0.22 4.86 -52.48 -0.26 -0.04 16 33 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 34 H 0.13 -0.29 6.30 -52.48 -0.33 -0.62 16 35 H 0.10 -0.32 7.66 -51.93 -0.40 -0.72 16 36 H 0.10 -0.30 7.66 -51.93 -0.40 -0.70 16 37 H 0.40 -2.13 8.70 -40.82 -0.36 -2.49 16 38 H 0.10 -0.24 6.33 -51.93 -0.33 -0.56 16 39 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.13 -0.39 6.68 -52.48 -0.35 -0.74 16 41 H 0.13 -0.38 8.06 -52.48 -0.42 -0.80 16 42 H 0.13 -0.13 8.06 -52.49 -0.42 -0.56 16 43 H 0.13 -0.18 8.05 -52.49 -0.42 -0.60 16 44 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 45 H 0.10 -0.33 7.71 -51.93 -0.40 -0.73 16 46 H 0.14 0.49 8.06 -52.48 -0.42 0.07 16 LS Contribution 403.81 15.07 6.09 6.09 Total: 0.00 -10.56 403.81 -13.84 -24.40 By element: Atomic # 1 Polarization: -7.57 SS G_CDS: -5.80 Total: -13.37 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -5.41 Total: -4.64 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -0.28 Total: 1.28 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -1.06 Total: -5.73 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.07 Total: -5.69 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.34 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -10.56 -13.84 -24.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.309 kcal (2) G-P(sol) polarization free energy of solvation -10.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.402 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.60 seconds