Wall clock time and date at job start Sun Mar 7 2021 01:42:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50694 * 109.47118 * 120.00721 * 2 1 3 5 5 C 1.38250 * 119.96908 * 244.99614 * 4 2 1 6 6 C 1.38284 * 120.11066 * 180.02562 * 5 4 2 7 7 C 1.38117 * 120.05627 * 359.97438 * 6 5 4 8 8 C 1.38754 * 119.94464 * 359.97438 * 7 6 5 9 9 O 1.35907 * 120.05475 * 180.02562 * 8 7 6 10 10 C 1.42902 * 117.00106 * 359.97438 * 9 8 7 11 11 C 1.50694 * 109.46998 * 179.97438 * 10 9 8 12 12 O 1.21277 * 119.99989 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99998 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99779 * 180.02562 * 13 11 10 15 15 H 1.08993 * 112.85497 * 334.66086 * 14 13 11 16 16 C 1.53782 * 113.61492 * 105.86547 * 14 13 11 17 17 C 1.54056 * 86.98433 * 89.15760 * 16 14 13 18 18 H 1.09000 * 113.69087 * 270.87155 * 17 16 14 19 19 C 1.50700 * 113.61528 * 139.98158 * 17 16 14 20 20 C 1.38214 * 119.99925 * 322.22308 * 19 17 16 21 21 C 1.38258 * 120.02386 * 179.77026 * 20 19 17 22 22 C 1.38196 * 120.01073 * 0.51137 * 21 20 19 23 23 C 1.38350 * 119.98808 * 359.74186 * 22 21 20 24 24 Br 1.89098 * 120.01149 * 179.97438 * 23 22 21 25 25 C 1.38242 * 119.99273 * 142.50345 * 19 17 16 26 26 C 1.53778 * 87.07859 * 25.43293 * 17 16 14 27 27 C 1.38159 * 119.97612 * 64.72274 * 4 2 1 28 28 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 29 29 H 1.09004 * 109.46690 * 240.00803 * 2 1 3 30 30 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 31 31 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 32 32 H 1.08005 * 119.94240 * 359.97438 * 5 4 2 33 33 H 1.07997 * 119.97314 * 179.97438 * 6 5 4 34 34 H 1.08003 * 120.02797 * 179.97438 * 7 6 5 35 35 H 1.08993 * 109.47215 * 300.00187 * 10 9 8 36 36 H 1.09007 * 109.46520 * 60.00277 * 10 9 8 37 37 H 0.96997 * 119.99521 * 0.02562 * 13 11 10 38 38 H 1.09000 * 113.61528 * 203.66085 * 16 14 13 39 39 H 1.09004 * 113.61592 * 334.56545 * 16 14 13 40 40 H 1.08005 * 119.99013 * 0.02562 * 20 19 17 41 41 H 1.08003 * 119.99614 * 180.23334 * 21 20 19 42 42 H 1.07999 * 120.00752 * 179.77237 * 22 21 20 43 43 H 1.08000 * 120.00767 * 359.97438 * 25 19 17 44 44 H 1.08997 * 113.61118 * 220.02472 * 26 17 16 45 45 H 1.08996 * 113.61476 * 89.12045 * 26 17 16 46 46 H 1.08008 * 120.02458 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2303 5 6 2.6388 -0.0118 2.1909 6 6 3.1016 -0.6611 3.3207 7 6 2.8574 -2.0096 3.4925 8 6 2.1467 -2.7128 2.5305 9 8 1.9047 -4.0397 2.6975 10 6 2.4120 -4.6470 3.8874 11 6 2.0489 -6.1095 3.8991 12 8 1.4183 -6.5850 2.9788 13 7 2.4250 -6.8890 4.9322 14 6 2.0725 -8.3109 4.9433 15 1 1.1849 -8.5315 4.3504 16 6 3.2594 -9.2422 4.6455 17 6 3.5336 -9.2436 6.1614 18 1 4.1955 -8.4413 6.4876 19 6 3.9383 -10.5915 6.7005 20 6 3.3471 -11.7391 6.2067 21 6 3.7214 -12.9762 6.6975 22 6 4.6793 -13.0653 7.6896 23 6 5.2677 -11.9166 8.1879 24 35 6.5780 -12.0376 9.5459 25 6 4.8967 -10.6795 7.6929 26 6 2.0410 -8.9268 6.3521 27 6 1.6796 -2.0583 1.4002 28 1 -0.3934 0.4418 -0.7650 29 1 1.7923 -0.5137 -0.8901 30 1 1.5616 2.4678 1.2086 31 1 3.5346 1.7703 -0.0322 32 1 2.8311 1.0426 2.0581 33 1 3.6543 -0.1132 4.0695 34 1 3.2194 -2.5163 4.3750 35 1 3.4965 -4.5412 3.9154 36 1 1.9766 -4.1579 4.7589 37 1 2.9291 -6.5085 5.6684 38 1 2.9633 -10.2156 4.2544 39 1 4.0476 -8.7709 4.0582 40 1 2.5954 -11.6697 5.4343 41 1 3.2618 -13.8730 6.3087 42 1 4.9690 -14.0315 8.0755 43 1 5.3557 -9.7825 8.0816 44 1 1.8461 -8.2010 7.1416 45 1 1.4123 -9.8140 6.4268 46 1 1.1234 -2.6028 0.6514 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:12 Heat of formation + Delta-G solvation = -10.022071 kcal Electronic energy + Delta-G solvation = -29228.062570 eV Core-core repulsion = 24904.030793 eV Total energy + Delta-G solvation = -4324.031777 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -41.83604 -41.34433 -40.40264 -39.21437 -38.59597 -37.30284 -34.82583 -33.20088 -32.70166 -32.25470 -31.67596 -30.18752 -29.31347 -26.88617 -26.72904 -26.09981 -23.82835 -23.58671 -23.05058 -22.35232 -21.65514 -20.11258 -19.26965 -18.46719 -18.41086 -17.98191 -17.64672 -17.50151 -17.17973 -16.81120 -16.42105 -16.18828 -15.88177 -15.71368 -15.48386 -15.11455 -15.00580 -14.65154 -14.61780 -14.50769 -14.35433 -14.28563 -13.85657 -13.77490 -13.48031 -13.41140 -13.25638 -12.93056 -12.44830 -12.35691 -12.27697 -12.17239 -12.04078 -11.94671 -11.85250 -11.56711 -11.38474 -11.18738 -11.08528 -10.39945 -10.21549 -10.01289 -9.86475 -9.62578 -9.43189 -4.93071 0.06400 0.07982 0.22266 0.26537 0.62541 1.24773 1.36263 1.41510 1.65587 1.96073 2.48067 2.51556 2.55727 3.38010 3.41025 3.45269 3.59041 3.65281 3.71995 3.79917 3.85602 3.85908 3.92749 3.95693 4.03046 4.08271 4.10420 4.14629 4.18343 4.27780 4.38604 4.40280 4.55441 4.60495 4.65316 4.74788 4.80913 4.84314 4.92122 4.95831 4.99402 5.07389 5.09787 5.18500 5.20463 5.29115 5.34726 5.42307 5.52396 5.60154 5.82509 6.16472 6.39563 6.87431 7.06478 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.090 4.090 3 Si 0.787 3.213 4 C -0.052 4.052 5 C -0.181 4.181 6 C -0.072 4.072 7 C -0.201 4.201 8 C 0.121 3.879 9 O -0.318 6.318 10 C 0.035 3.965 11 C 0.517 3.483 12 O -0.570 6.570 13 N -0.692 5.692 14 C 0.115 3.885 15 H 0.085 0.915 16 C -0.142 4.142 17 C -0.065 4.065 18 H 0.115 0.885 19 C -0.067 4.067 20 C -0.106 4.106 21 C -0.114 4.114 22 C -0.108 4.108 23 C -0.103 4.103 24 Br -0.061 7.061 25 C -0.096 4.096 26 C -0.122 4.122 27 C -0.144 4.144 28 H 0.404 0.596 29 H 0.090 0.910 30 H -0.292 1.292 31 H -0.285 1.285 32 H 0.122 0.878 33 H 0.159 0.841 34 H 0.168 0.832 35 H 0.127 0.873 36 H 0.126 0.874 37 H 0.421 0.579 38 H 0.099 0.901 39 H 0.068 0.932 40 H 0.146 0.854 41 H 0.149 0.851 42 H 0.136 0.864 43 H 0.140 0.860 44 H 0.092 0.908 45 H 0.103 0.897 46 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.623 2.537 1.461 3.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.199 4.199 3 Si 0.692 3.308 4 C -0.052 4.052 5 C -0.198 4.198 6 C -0.090 4.090 7 C -0.219 4.219 8 C 0.075 3.925 9 O -0.231 6.231 10 C -0.043 4.043 11 C 0.303 3.697 12 O -0.448 6.448 13 N -0.346 5.346 14 C 0.009 3.991 15 H 0.103 0.897 16 C -0.181 4.181 17 C -0.083 4.083 18 H 0.133 0.867 19 C -0.068 4.068 20 C -0.124 4.124 21 C -0.133 4.133 22 C -0.128 4.128 23 C -0.182 4.182 24 Br 0.024 6.976 25 C -0.116 4.116 26 C -0.160 4.160 27 C -0.163 4.163 28 H 0.255 0.745 29 H 0.108 0.892 30 H -0.220 1.220 31 H -0.212 1.212 32 H 0.139 0.861 33 H 0.176 0.824 34 H 0.185 0.815 35 H 0.145 0.855 36 H 0.144 0.856 37 H 0.260 0.740 38 H 0.117 0.883 39 H 0.087 0.913 40 H 0.163 0.837 41 H 0.167 0.833 42 H 0.154 0.846 43 H 0.158 0.842 44 H 0.110 0.890 45 H 0.121 0.879 46 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 2.121 2.282 2.155 3.788 hybrid contribution 0.134 -0.651 0.331 0.742 sum 2.255 1.632 2.486 3.732 Atomic orbital electron populations 1.86454 1.17216 1.82539 1.51331 1.25039 0.85985 1.11948 0.96930 0.94225 0.77286 0.74629 0.84672 1.19488 0.96959 0.92954 0.95838 1.21054 1.03105 0.99526 0.96153 1.21248 0.96983 0.94077 0.96666 1.21618 1.03676 0.95775 1.00858 1.19168 0.95659 0.82504 0.95131 1.86129 1.74452 1.20357 1.42149 1.22772 1.02687 0.90239 0.88557 1.20475 0.78727 0.88377 0.82143 1.90769 1.40844 1.75950 1.37262 1.45338 1.57290 1.08885 1.23038 1.21870 0.98439 0.79661 0.99096 0.89730 1.23621 0.98175 1.00574 0.95713 1.21675 0.97399 0.93854 0.95408 0.86686 1.19842 0.95590 0.95765 0.95581 1.21441 0.99541 0.91773 0.99636 1.21457 0.96725 0.99097 0.96017 1.21348 0.96671 0.97647 0.97150 1.21971 0.99865 0.97063 0.99331 1.96761 1.52629 1.98946 1.49237 1.21189 0.97469 0.96281 0.96670 1.23376 0.95340 1.01807 0.95461 1.20345 1.03637 0.94196 0.98121 0.74504 0.89228 1.21976 1.21238 0.86064 0.82358 0.81504 0.85507 0.85647 0.74035 0.88265 0.91273 0.83680 0.83283 0.84572 0.84221 0.88981 0.87871 0.85781 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.50 12.81 -148.98 -1.91 -3.41 16 2 C -0.09 -0.18 2.79 71.23 0.20 0.02 16 3 Si 0.79 -1.13 29.85 68.60 2.05 0.92 16 4 C -0.05 -0.38 5.38 -19.88 -0.11 -0.49 16 5 C -0.18 -0.98 8.67 22.28 0.19 -0.79 16 6 C -0.07 -0.09 10.04 22.25 0.22 0.13 16 7 C -0.20 -0.09 9.04 22.36 0.20 0.11 16 8 C 0.12 0.79 6.69 22.51 0.15 0.94 16 9 O -0.32 -2.47 9.67 -73.47 -0.71 -3.18 16 10 C 0.04 -0.09 5.22 71.23 0.37 0.28 16 11 C 0.52 1.31 7.91 87.65 0.69 2.00 16 12 O -0.57 -8.25 16.12 16.02 0.26 -7.99 16 13 N -0.69 3.62 5.26 -440.04 -2.32 1.31 16 14 C 0.11 -0.42 4.30 45.52 0.20 -0.23 16 15 H 0.08 0.14 7.50 -2.39 -0.02 0.12 16 16 C -0.14 0.66 7.27 31.21 0.23 0.88 16 17 C -0.07 0.47 3.87 -10.92 -0.04 0.42 16 18 H 0.12 -1.15 8.09 -2.39 -0.02 -1.17 16 19 C -0.07 0.23 5.29 -19.87 -0.11 0.12 16 20 C -0.11 0.37 8.60 22.27 0.19 0.56 16 21 C -0.11 0.28 10.05 22.26 0.22 0.50 16 22 C -0.11 -0.01 9.79 22.29 0.22 0.20 16 23 C -0.10 -0.15 6.22 22.31 0.14 -0.01 16 24 Br -0.06 -0.15 33.70 -20.37 -0.69 -0.84 16 25 C -0.10 0.10 9.45 22.29 0.21 0.31 16 26 C -0.12 0.95 7.29 31.12 0.23 1.18 16 27 C -0.14 -1.34 9.62 22.36 0.22 -1.12 16 28 H 0.40 -3.39 8.74 -74.05 -0.65 -4.04 16 29 H 0.09 -0.12 7.96 -2.38 -0.02 -0.14 16 30 H -0.29 -1.55 7.05 99.48 0.70 -0.85 16 31 H -0.29 -0.98 7.11 99.48 0.71 -0.27 16 32 H 0.12 0.51 4.86 -2.91 -0.01 0.50 16 33 H 0.16 -0.77 8.06 -2.91 -0.02 -0.79 16 34 H 0.17 -1.29 6.30 -2.91 -0.02 -1.31 16 35 H 0.13 -1.16 7.66 -2.39 -0.02 -1.18 16 36 H 0.13 -1.11 7.66 -2.38 -0.02 -1.13 16 37 H 0.42 -5.40 8.70 -92.71 -0.81 -6.20 16 38 H 0.10 -0.49 6.33 -2.39 -0.02 -0.50 16 39 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 40 H 0.15 -1.01 6.68 -2.91 -0.02 -1.03 16 41 H 0.15 -0.95 8.06 -2.91 -0.02 -0.97 16 42 H 0.14 -0.21 8.06 -2.91 -0.02 -0.23 16 43 H 0.14 -0.50 8.05 -2.91 -0.02 -0.52 16 44 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 45 H 0.10 -0.79 7.71 -2.39 -0.02 -0.81 16 46 H 0.12 1.30 8.06 -2.91 -0.02 1.28 16 Total: 0.00 -28.44 403.81 -0.07 -28.51 By element: Atomic # 1 Polarization: -19.98 SS G_CDS: -0.38 Total: -20.36 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: 3.63 Total: 5.05 kcal Atomic # 7 Polarization: 3.62 SS G_CDS: -2.32 Total: 1.31 kcal Atomic # 8 Polarization: -12.22 SS G_CDS: -2.36 Total: -14.58 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: 2.05 Total: 0.92 kcal Atomic # 35 Polarization: -0.15 SS G_CDS: -0.69 Total: -0.84 kcal Total: -28.44 -0.07 -28.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.486 kcal (2) G-P(sol) polarization free energy of solvation -28.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.952 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.508 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.022 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds