Wall clock time and date at job start Sun Mar 7 2021 01:42:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35974 * 117.00190 * 2 1 4 4 C 1.38681 * 119.99971 * 180.02562 * 3 2 1 5 5 C 1.38152 * 119.99710 * 179.74682 * 4 3 2 6 6 C 1.50707 * 120.00047 * 180.24864 * 5 4 3 7 7 O 1.42895 * 109.47296 * 105.25187 * 6 5 4 8 8 Si 1.86301 * 109.46785 * 345.25420 * 6 5 4 9 9 C 1.38676 * 120.00087 * 0.50320 * 5 4 3 10 10 O 1.35986 * 119.99685 * 179.74162 * 9 5 4 11 11 C 1.42905 * 116.99828 * 179.72801 * 10 9 5 12 12 C 1.50697 * 109.47029 * 180.02562 * 11 10 9 13 13 O 1.21280 * 120.00024 * 359.97438 * 12 11 10 14 14 N 1.34778 * 119.99600 * 180.02562 * 12 11 10 15 15 C 1.46504 * 119.99940 * 179.97438 * 14 12 11 16 16 H 1.09008 * 112.90390 * 23.75137 * 15 14 12 17 17 C 1.53780 * 113.61658 * 154.99659 * 15 14 12 18 18 C 1.53778 * 87.07922 * 89.11795 * 17 15 14 19 19 H 1.08998 * 113.61580 * 270.79990 * 18 17 15 20 20 C 1.50697 * 113.61457 * 139.98331 * 18 17 15 21 21 C 1.38193 * 119.99702 * 119.99773 * 20 18 17 22 22 C 1.38355 * 119.99215 * 180.02562 * 21 20 18 23 23 Br 1.89094 * 120.01128 * 179.72839 * 22 21 20 24 24 C 1.38306 * 119.97618 * 359.97438 * 22 21 20 25 25 C 1.38238 * 119.98985 * 0.02562 * 24 22 21 26 26 C 1.38214 * 120.01404 * 359.97438 * 25 24 22 27 27 C 1.53777 * 113.61792 * 252.49824 * 15 14 12 28 28 C 1.38718 * 120.00148 * 359.47460 * 9 5 4 29 29 C 1.38104 * 119.99713 * 0.27077 * 28 9 5 30 30 H 1.09001 * 109.46882 * 59.99819 * 1 2 3 31 31 H 1.09004 * 109.47355 * 179.97438 * 1 2 3 32 32 H 1.08993 * 109.47086 * 300.00257 * 1 2 3 33 33 H 1.07993 * 119.99760 * 0.02562 * 4 3 2 34 34 H 1.08993 * 109.46988 * 225.25694 * 6 5 4 35 35 H 0.96697 * 114.00326 * 300.00733 * 7 6 5 36 36 H 1.48507 * 110.00122 * 58.68098 * 8 6 5 37 37 H 1.48497 * 109.99967 * 179.97438 * 8 6 5 38 38 H 1.08999 * 109.47001 * 59.99704 * 11 10 9 39 39 H 1.09001 * 109.46798 * 300.00526 * 11 10 9 40 40 H 0.97000 * 120.00179 * 359.97438 * 14 12 11 41 41 H 1.09006 * 113.61344 * 334.56950 * 17 15 14 42 42 H 1.08998 * 113.69408 * 203.68223 * 17 15 14 43 43 H 1.07997 * 120.00692 * 0.04933 * 21 20 18 44 44 H 1.08001 * 120.00157 * 179.97438 * 24 22 21 45 45 H 1.08002 * 119.99143 * 179.97438 * 25 24 22 46 46 H 1.08000 * 119.99305 * 180.02562 * 26 25 24 47 47 H 1.08994 * 113.61738 * 156.33764 * 27 15 14 48 48 H 1.09000 * 113.61125 * 25.42940 * 27 15 14 49 49 H 1.07998 * 119.99964 * 180.29517 * 28 9 5 50 50 H 1.08005 * 119.99919 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2115 0.0000 4 6 3.4313 1.2840 -0.0005 5 6 4.0585 2.5150 -0.0058 6 6 5.5635 2.5939 -0.0121 7 8 6.0154 2.9698 -1.3145 8 14 6.2742 0.9311 0.4359 9 6 3.3032 3.6780 0.0000 10 8 3.9207 4.8896 0.0001 11 6 3.0808 6.0458 0.0001 12 6 3.9351 7.2872 -0.0004 13 8 5.1441 7.1914 -0.0003 14 7 3.3554 8.5040 0.0001 15 6 4.1859 9.7110 0.0002 16 1 5.1834 9.5396 -0.4046 17 6 3.4829 10.9425 -0.5948 18 6 2.9651 11.2343 0.8234 19 1 2.0127 10.7540 1.0480 20 6 2.9815 12.6977 1.1829 21 6 1.8043 13.3407 1.5153 22 6 1.8194 14.6844 1.8448 23 35 0.2079 15.5666 2.2923 24 6 3.0129 15.3832 1.8417 25 6 4.1899 14.7391 1.5090 26 6 4.1744 13.3968 1.1800 27 6 4.1864 10.4584 1.3441 28 6 1.9180 3.6055 0.0000 29 6 1.2910 2.3750 0.0000 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8899 33 1 4.0194 0.3783 -0.0014 34 1 5.8913 3.3369 0.7148 35 1 5.7591 2.3524 -2.0132 36 1 5.8088 -0.0970 -0.5294 37 1 7.7578 0.9953 0.4326 38 1 2.4515 6.0376 0.8901 39 1 2.4515 6.0377 -0.8898 40 1 2.3885 8.5806 0.0004 41 1 2.6942 10.6943 -1.3052 42 1 4.1703 11.6991 -0.9730 43 1 0.8727 12.7944 1.5183 44 1 3.0251 16.4322 2.0984 45 1 5.1219 15.2850 1.5062 46 1 5.0942 12.8939 0.9205 47 1 5.0672 11.0819 1.4966 48 1 3.9657 9.8193 2.1991 49 1 1.3298 4.5113 -0.0003 50 1 0.2124 2.3185 0.0005 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:17 Heat of formation + Delta-G solvation = -42.724174 kcal Electronic energy + Delta-G solvation = -34060.828933 eV Core-core repulsion = 29261.159275 eV Total energy + Delta-G solvation = -4799.669658 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.73 seconds Orbital eigenvalues (eV) -41.86568 -41.50991 -40.56058 -39.82186 -38.86376 -38.20392 -36.95843 -34.78015 -33.18555 -32.82688 -32.16466 -30.99783 -30.16233 -29.31764 -27.94866 -26.70815 -26.63693 -26.15387 -23.86635 -23.50818 -22.55348 -22.42598 -21.83873 -20.10614 -19.65341 -18.76983 -18.54897 -18.08134 -17.69650 -17.46243 -17.28887 -16.97361 -16.62680 -16.47853 -16.18880 -16.06591 -16.02316 -15.62152 -15.50516 -15.23140 -15.05918 -14.83677 -14.59177 -14.48858 -14.33458 -14.26005 -14.00307 -13.62589 -13.47239 -13.43203 -13.35703 -13.01637 -12.90509 -12.49330 -12.43537 -12.33493 -12.02103 -11.93461 -11.86352 -11.74992 -11.54691 -11.41454 -11.37024 -11.17040 -11.01056 -10.56490 -10.17121 -10.12035 -9.85215 -9.61298 -8.78586 -4.96022 0.07143 0.09135 0.27811 0.37414 0.63710 1.26745 1.43385 1.48409 1.55345 1.90925 2.35610 2.55875 2.56948 2.61365 3.41990 3.43592 3.50177 3.60745 3.66532 3.69601 3.76657 3.87469 3.94974 3.96707 4.09848 4.10214 4.10946 4.11811 4.14873 4.26053 4.29110 4.41554 4.43935 4.44363 4.49093 4.62233 4.66972 4.70139 4.76398 4.79303 4.83332 4.93586 4.97606 4.99724 5.01529 5.12268 5.16208 5.21684 5.23355 5.36155 5.43424 5.46314 5.62119 5.83616 6.20027 6.41777 6.48808 6.52097 7.13308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.336 6.336 3 C 0.087 3.913 4 C -0.126 4.126 5 C -0.118 4.118 6 C -0.076 4.076 7 O -0.544 6.544 8 Si 0.773 3.227 9 C 0.102 3.898 10 O -0.310 6.310 11 C 0.036 3.964 12 C 0.515 3.485 13 O -0.569 6.569 14 N -0.693 5.693 15 C 0.115 3.885 16 H 0.082 0.918 17 C -0.123 4.123 18 C -0.064 4.064 19 H 0.116 0.884 20 C -0.067 4.067 21 C -0.096 4.096 22 C -0.103 4.103 23 Br -0.061 7.061 24 C -0.108 4.108 25 C -0.115 4.115 26 C -0.106 4.106 27 C -0.142 4.142 28 C -0.163 4.163 29 C -0.158 4.158 30 H 0.065 0.935 31 H 0.113 0.887 32 H 0.069 0.931 33 H 0.145 0.855 34 H 0.107 0.893 35 H 0.382 0.618 36 H -0.273 1.273 37 H -0.301 1.301 38 H 0.127 0.873 39 H 0.121 0.879 40 H 0.421 0.579 41 H 0.091 0.909 42 H 0.101 0.899 43 H 0.141 0.859 44 H 0.136 0.864 45 H 0.149 0.851 46 H 0.145 0.855 47 H 0.098 0.902 48 H 0.070 0.930 49 H 0.166 0.834 50 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.210 0.006 0.915 8.261 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.250 6.250 3 C 0.042 3.958 4 C -0.144 4.144 5 C -0.119 4.119 6 C -0.184 4.184 7 O -0.351 6.351 8 Si 0.677 3.323 9 C 0.056 3.944 10 O -0.223 6.223 11 C -0.042 4.042 12 C 0.301 3.699 13 O -0.447 6.447 14 N -0.347 5.347 15 C 0.010 3.990 16 H 0.101 0.899 17 C -0.161 4.161 18 C -0.082 4.082 19 H 0.134 0.866 20 C -0.068 4.068 21 C -0.116 4.116 22 C -0.182 4.182 23 Br 0.025 6.975 24 C -0.128 4.128 25 C -0.133 4.133 26 C -0.124 4.124 27 C -0.180 4.180 28 C -0.181 4.181 29 C -0.176 4.176 30 H 0.084 0.916 31 H 0.131 0.869 32 H 0.087 0.913 33 H 0.162 0.838 34 H 0.125 0.875 35 H 0.231 0.769 36 H -0.199 1.199 37 H -0.229 1.229 38 H 0.144 0.856 39 H 0.139 0.861 40 H 0.259 0.741 41 H 0.109 0.891 42 H 0.119 0.881 43 H 0.159 0.841 44 H 0.154 0.846 45 H 0.167 0.833 46 H 0.162 0.838 47 H 0.116 0.884 48 H 0.089 0.911 49 H 0.183 0.817 50 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -6.952 -0.035 1.157 7.048 hybrid contribution -0.423 0.497 -1.216 1.380 sum -7.374 0.461 -0.058 7.389 Atomic orbital electron populations 1.23344 0.76404 1.05529 1.02400 1.86078 1.23391 1.26524 1.89042 1.18957 0.91987 0.85222 0.99598 1.20271 0.92566 0.97062 1.04488 1.19362 0.96064 0.90570 1.05913 1.25103 0.92101 1.13445 0.87733 1.86655 1.78737 1.52682 1.17063 0.94021 0.76533 0.72529 0.89195 1.18828 0.91497 0.84516 0.99532 1.86210 1.35149 1.11870 1.89046 1.22715 0.92643 0.82198 1.06683 1.20549 0.88329 0.85458 0.75523 1.90783 1.16844 1.87284 1.49748 1.45334 1.11078 1.03610 1.74661 1.21841 0.95505 0.83891 0.97812 0.89931 1.23380 1.00833 0.95876 0.96017 1.21621 0.99875 0.90071 0.96665 0.86571 1.19848 0.92426 0.96022 0.98471 1.21188 0.99509 0.92357 0.98503 1.21969 0.92269 0.96239 1.07726 1.96760 1.29769 1.78474 1.92544 1.21344 0.91395 1.00775 0.99298 1.21450 0.98369 0.95120 0.98395 1.21442 0.98627 0.94286 0.98081 1.23567 0.98742 0.98469 0.97256 1.21380 0.92110 0.99982 1.04669 1.21400 1.01523 0.90899 1.03790 0.91645 0.86881 0.91258 0.83760 0.87540 0.76941 1.19941 1.22877 0.85589 0.86095 0.74094 0.89065 0.88055 0.84142 0.84591 0.83346 0.83769 0.88388 0.91112 0.81684 0.82245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.01 16 2 O -0.34 -0.64 10.50 -93.26 -0.98 -1.62 16 3 C 0.09 0.17 6.69 22.49 0.15 0.32 16 4 C -0.13 -0.41 8.59 22.36 0.19 -0.22 16 5 C -0.12 -0.57 5.27 -19.78 -0.10 -0.67 16 6 C -0.08 -0.49 2.37 71.24 0.17 -0.33 16 7 O -0.54 -5.47 12.88 -148.98 -1.92 -7.39 16 8 Si 0.77 2.15 30.24 68.60 2.07 4.23 16 9 C 0.10 0.38 6.66 22.49 0.15 0.52 16 10 O -0.31 -2.00 9.00 -74.36 -0.67 -2.66 16 11 C 0.04 -0.11 5.22 71.23 0.37 0.26 16 12 C 0.52 1.30 7.91 87.66 0.69 2.00 16 13 O -0.57 -8.51 16.10 16.01 0.26 -8.25 16 14 N -0.69 3.62 5.26 -440.03 -2.32 1.30 16 15 C 0.12 -0.39 4.32 45.52 0.20 -0.19 16 16 H 0.08 0.20 7.47 -2.38 -0.02 0.18 16 17 C -0.12 0.92 7.29 31.12 0.23 1.15 16 18 C -0.06 0.47 3.86 -11.02 -0.04 0.42 16 19 H 0.12 -1.20 8.09 -2.39 -0.02 -1.22 16 20 C -0.07 0.23 5.29 -19.87 -0.11 0.13 16 21 C -0.10 0.12 9.45 22.29 0.21 0.33 16 22 C -0.10 -0.13 6.22 22.31 0.14 0.01 16 23 Br -0.06 -0.14 33.70 -20.37 -0.69 -0.82 16 24 C -0.11 -0.01 9.79 22.29 0.22 0.21 16 25 C -0.11 0.27 10.05 22.26 0.22 0.50 16 26 C -0.11 0.36 8.61 22.27 0.19 0.55 16 27 C -0.14 0.66 7.25 31.12 0.23 0.88 16 28 C -0.16 0.42 9.03 22.35 0.20 0.62 16 29 C -0.16 0.38 9.03 22.35 0.20 0.58 16 30 H 0.06 -0.53 7.66 -2.39 -0.02 -0.55 16 31 H 0.11 -0.96 8.14 -2.39 -0.02 -0.98 16 32 H 0.07 -0.60 7.66 -2.39 -0.02 -0.61 16 33 H 0.15 0.29 4.86 -2.91 -0.01 0.27 16 34 H 0.11 0.93 7.82 -2.39 -0.02 0.91 16 35 H 0.38 1.16 8.70 -74.06 -0.64 0.51 16 36 H -0.27 -1.34 6.69 99.48 0.67 -0.68 16 37 H -0.30 -3.03 7.11 99.48 0.71 -2.32 16 38 H 0.13 -1.29 7.66 -2.39 -0.02 -1.31 16 39 H 0.12 -1.13 7.66 -2.39 -0.02 -1.15 16 40 H 0.42 -5.44 8.70 -92.71 -0.81 -6.25 16 41 H 0.09 -0.86 8.14 -2.38 -0.02 -0.88 16 42 H 0.10 -0.73 7.72 -2.39 -0.02 -0.74 16 43 H 0.14 -0.55 8.05 -2.91 -0.02 -0.57 16 44 H 0.14 -0.21 8.06 -2.91 -0.02 -0.24 16 45 H 0.15 -0.92 8.06 -2.91 -0.02 -0.95 16 46 H 0.14 -0.96 6.66 -2.91 -0.02 -0.98 16 47 H 0.10 -0.47 6.31 -2.39 -0.02 -0.48 16 48 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 49 H 0.17 -1.65 6.29 -2.91 -0.02 -1.66 16 50 H 0.16 -1.28 6.29 -2.91 -0.02 -1.30 16 Total: 0.00 -28.31 432.34 -0.05 -28.36 By element: Atomic # 1 Polarization: -20.79 SS G_CDS: -0.44 Total: -21.23 kcal Atomic # 6 Polarization: 3.46 SS G_CDS: 4.62 Total: 8.08 kcal Atomic # 7 Polarization: 3.62 SS G_CDS: -2.32 Total: 1.30 kcal Atomic # 8 Polarization: -16.61 SS G_CDS: -3.31 Total: -19.92 kcal Atomic # 14 Polarization: 2.15 SS G_CDS: 2.07 Total: 4.23 kcal Atomic # 35 Polarization: -0.14 SS G_CDS: -0.69 Total: -0.82 kcal Total: -28.31 -0.05 -28.36 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.360 kcal (2) G-P(sol) polarization free energy of solvation -28.311 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.671 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.053 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.364 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.724 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.73 seconds