Wall clock time and date at job start Sun Mar 7 2021 01:42:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35896 * 117.00577 * 2 1 4 4 C 1.38610 * 120.03225 * 180.02562 * 3 2 1 5 5 C 1.38656 * 119.89306 * 180.02562 * 4 3 2 6 6 O 1.35896 * 120.02625 * 179.97438 * 5 4 3 7 7 C 1.42905 * 117.00039 * 359.97438 * 6 5 4 8 8 C 1.50699 * 109.46972 * 180.02562 * 7 6 5 9 9 O 1.21282 * 120.00041 * 0.02562 * 8 7 6 10 10 N 1.34779 * 120.00037 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00169 * 180.02562 * 10 8 7 12 12 H 1.09005 * 112.84790 * 334.66860 * 11 10 8 13 13 C 1.53785 * 113.61395 * 105.85632 * 11 10 8 14 14 C 1.54056 * 86.98219 * 89.16453 * 13 11 10 15 15 H 1.09002 * 113.61081 * 270.88458 * 14 13 11 16 16 C 1.50701 * 113.62053 * 139.97749 * 14 13 11 17 17 C 1.38190 * 119.99490 * 142.50354 * 16 14 13 18 18 C 1.38350 * 119.99283 * 179.97438 * 17 16 14 19 19 Br 1.89096 * 120.01184 * 180.02562 * 18 17 16 20 20 C 1.38303 * 119.97627 * 0.02562 * 18 17 16 21 21 C 1.38243 * 119.98853 * 359.97438 * 20 18 17 22 22 C 1.38221 * 120.01112 * 359.72445 * 21 20 18 23 23 C 1.53772 * 113.61622 * 203.46775 * 11 10 8 24 24 C 1.38747 * 119.94572 * 0.25570 * 5 4 3 25 25 C 1.50693 * 119.97552 * 179.74474 * 24 5 4 26 26 O 1.42897 * 109.47121 * 285.00069 * 25 24 5 27 27 Si 1.86298 * 109.47324 * 164.99643 * 25 24 5 28 28 C 1.38208 * 120.05226 * 359.49040 * 24 5 4 29 29 C 1.38149 * 120.10796 * 0.50818 * 28 24 5 30 30 H 1.09002 * 109.47321 * 59.99611 * 1 2 3 31 31 H 1.08991 * 109.47442 * 180.02562 * 1 2 3 32 32 H 1.09006 * 109.46776 * 299.99890 * 1 2 3 33 33 H 1.08006 * 120.05033 * 0.04724 * 4 3 2 34 34 H 1.09000 * 109.47187 * 300.00222 * 7 6 5 35 35 H 1.09001 * 109.46558 * 60.00270 * 7 6 5 36 36 H 0.96996 * 119.99844 * 359.97438 * 10 8 7 37 37 H 1.08998 * 113.61672 * 203.66296 * 13 11 10 38 38 H 1.09001 * 113.61836 * 334.57634 * 13 11 10 39 39 H 1.08001 * 120.00394 * 359.97438 * 17 16 14 40 40 H 1.08003 * 120.00697 * 180.02562 * 20 18 17 41 41 H 1.08006 * 119.99017 * 180.02562 * 21 20 18 42 42 H 1.07997 * 119.98700 * 180.29841 * 22 21 20 43 43 H 1.09006 * 113.61353 * 25.43058 * 23 11 10 44 44 H 1.08999 * 113.61864 * 156.33229 * 23 11 10 45 45 H 1.09009 * 109.47380 * 45.00141 * 25 24 5 46 46 H 0.96697 * 113.99859 * 299.99608 * 26 25 24 47 47 H 1.48501 * 110.00272 * 179.97438 * 27 25 24 48 48 H 1.48500 * 110.00093 * 301.31937 * 27 25 24 49 49 H 1.07996 * 119.94280 * 180.25941 * 28 24 5 50 50 H 1.08004 * 119.97218 * 179.72614 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4302 1.2840 -0.0005 5 6 4.0568 2.5209 0.0000 6 8 5.4137 2.5958 0.0000 7 6 6.1317 1.3602 0.0000 8 6 7.6125 1.6397 0.0006 9 8 8.0136 2.7843 0.0015 10 7 8.4913 0.6178 0.0002 11 6 9.9308 0.8895 0.0014 12 1 10.1786 1.8606 -0.4273 13 6 10.6067 0.6241 1.3571 14 6 10.8260 -0.8217 0.8727 15 1 9.9997 -1.4918 1.1100 16 6 12.1692 -1.3890 1.2538 17 6 12.2795 -2.7169 1.6201 18 6 13.5127 -3.2378 1.9694 19 35 13.6645 -5.0549 2.4701 20 6 14.6345 -2.4289 1.9523 21 6 14.5231 -1.1007 1.5857 22 6 13.2918 -0.5824 1.2308 23 6 10.7762 -0.2657 -0.5602 24 6 3.2974 3.6820 0.0064 25 6 3.9777 5.0266 0.0128 26 8 4.5047 5.2875 1.3152 27 14 2.7439 6.3490 -0.4343 28 6 1.9173 3.6064 0.0017 29 6 1.2907 2.3752 0.0011 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3634 -1.0276 0.0005 32 1 -0.3633 0.5139 0.8901 33 1 4.0197 0.3789 -0.0017 34 1 5.8699 0.7878 0.8900 35 1 5.8699 0.7880 -0.8900 36 1 8.1705 -0.2976 -0.0001 37 1 11.5323 1.1817 1.5001 38 1 9.9280 0.7033 2.2063 39 1 11.4032 -3.3480 1.6337 40 1 15.5975 -2.8351 2.2245 41 1 15.3991 -0.4691 1.5719 42 1 13.2061 0.4541 0.9398 43 1 10.2343 -0.9043 -1.2578 44 1 11.7481 0.0491 -0.9405 45 1 4.7897 5.0265 -0.7144 46 1 3.8367 5.3025 2.0141 47 1 3.4024 7.6800 -0.4309 48 1 2.1650 6.0716 -1.7733 49 1 1.3279 4.5114 0.0025 50 1 0.2121 2.3188 0.0018 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:24 Heat of formation + Delta-G solvation = -46.730546 kcal Electronic energy + Delta-G solvation = -34175.708798 eV Core-core repulsion = 29375.865411 eV Total energy + Delta-G solvation = -4799.843387 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -41.92434 -41.53251 -40.58812 -39.86823 -38.89412 -38.20449 -36.91505 -34.82033 -33.19808 -32.31852 -32.17232 -31.36213 -30.19164 -29.39906 -28.34480 -26.73590 -26.19251 -26.10822 -23.89170 -23.51998 -22.57355 -22.48315 -21.87608 -20.16223 -19.90506 -18.66815 -18.23178 -17.93664 -17.77673 -17.54872 -17.17926 -16.95935 -16.67383 -16.50994 -16.45787 -16.18011 -15.95848 -15.63453 -15.48599 -15.15209 -15.06676 -14.83697 -14.55731 -14.48700 -14.45977 -14.28153 -13.88946 -13.60869 -13.46808 -13.38535 -13.31405 -13.16225 -12.93061 -12.48955 -12.35317 -12.26612 -12.04633 -12.02022 -11.93629 -11.86586 -11.62725 -11.56971 -11.38644 -11.18957 -11.07939 -10.35447 -10.21492 -9.86550 -9.70151 -9.62694 -9.10119 -5.03494 0.07888 0.20767 0.26448 0.30160 0.62506 1.31853 1.36674 1.39705 1.64729 1.98650 2.24858 2.53880 2.55599 2.57933 3.40424 3.47140 3.58703 3.60587 3.65870 3.73691 3.83379 3.85365 3.92112 3.92370 4.01934 4.07857 4.08435 4.10189 4.16580 4.27551 4.34677 4.39663 4.40157 4.43990 4.46686 4.59527 4.61474 4.64989 4.73861 4.79939 4.80562 4.91786 4.95536 4.98793 5.02177 5.09288 5.20318 5.23614 5.27907 5.34572 5.42165 5.48212 5.59639 5.82295 6.11624 6.35051 6.41105 6.86471 7.06775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.163 3.837 4 C -0.254 4.254 5 C 0.173 3.827 6 O -0.305 6.305 7 C 0.035 3.965 8 C 0.517 3.483 9 O -0.567 6.567 10 N -0.692 5.692 11 C 0.115 3.885 12 H 0.084 0.916 13 C -0.142 4.142 14 C -0.065 4.065 15 H 0.114 0.886 16 C -0.067 4.067 17 C -0.096 4.096 18 C -0.103 4.103 19 Br -0.061 7.061 20 C -0.108 4.108 21 C -0.114 4.114 22 C -0.106 4.106 23 C -0.121 4.121 24 C -0.203 4.203 25 C -0.068 4.068 26 O -0.557 6.557 27 Si 0.794 3.206 28 C -0.031 4.031 29 C -0.237 4.237 30 H 0.068 0.932 31 H 0.115 0.885 32 H 0.071 0.929 33 H 0.152 0.848 34 H 0.122 0.878 35 H 0.122 0.878 36 H 0.421 0.579 37 H 0.099 0.901 38 H 0.068 0.932 39 H 0.140 0.860 40 H 0.137 0.863 41 H 0.150 0.850 42 H 0.145 0.855 43 H 0.091 0.909 44 H 0.103 0.897 45 H 0.081 0.919 46 H 0.391 0.609 47 H -0.304 1.304 48 H -0.280 1.280 49 H 0.166 0.834 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.303 -4.191 0.314 7.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.117 3.883 4 C -0.273 4.273 5 C 0.127 3.873 6 O -0.217 6.217 7 C -0.043 4.043 8 C 0.303 3.697 9 O -0.445 6.445 10 N -0.346 5.346 11 C 0.010 3.990 12 H 0.102 0.898 13 C -0.181 4.181 14 C -0.083 4.083 15 H 0.132 0.868 16 C -0.068 4.068 17 C -0.116 4.116 18 C -0.182 4.182 19 Br 0.025 6.975 20 C -0.128 4.128 21 C -0.133 4.133 22 C -0.124 4.124 23 C -0.159 4.159 24 C -0.204 4.204 25 C -0.176 4.176 26 O -0.365 6.365 27 Si 0.698 3.302 28 C -0.049 4.049 29 C -0.256 4.256 30 H 0.087 0.913 31 H 0.134 0.866 32 H 0.090 0.910 33 H 0.170 0.830 34 H 0.140 0.860 35 H 0.140 0.860 36 H 0.259 0.741 37 H 0.117 0.883 38 H 0.087 0.913 39 H 0.158 0.842 40 H 0.155 0.845 41 H 0.167 0.833 42 H 0.163 0.837 43 H 0.110 0.890 44 H 0.122 0.878 45 H 0.098 0.902 46 H 0.240 0.760 47 H -0.232 1.232 48 H -0.207 1.207 49 H 0.183 0.817 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -5.412 -3.470 -0.386 6.440 hybrid contribution 0.610 -0.630 -0.241 0.910 sum -4.801 -4.100 -0.627 6.345 Atomic orbital electron populations 1.23410 0.75943 1.05699 1.02784 1.86053 1.23815 1.26605 1.87937 1.18880 0.91611 0.85075 0.92728 1.20545 0.93522 0.97333 1.15877 1.18621 0.81678 0.93311 0.93694 1.86221 1.15650 1.31658 1.88190 1.22734 0.88434 0.86518 1.06640 1.20450 0.88471 0.85161 0.75614 1.90780 1.80687 1.23272 1.49767 1.45342 1.05252 1.09475 1.74562 1.21866 0.79303 1.00003 0.97872 0.89816 1.23622 1.01499 0.95795 0.97184 1.21665 0.94040 0.95928 0.96655 0.86754 1.19831 0.95797 0.92695 0.98466 1.21181 0.96211 0.95762 0.98454 1.21964 0.97293 0.91476 1.07449 1.96759 1.98681 1.10887 1.91194 1.21349 0.97854 0.94291 0.99257 1.21458 0.98928 0.94662 0.98231 1.21437 0.91952 1.00901 0.98115 1.23372 1.00808 0.95850 0.95901 1.19748 0.93835 0.94023 1.12825 1.25126 1.04358 0.99728 0.88422 1.86541 1.39280 1.93844 1.16831 0.94122 0.80365 0.73084 0.82590 1.20863 0.91516 0.98616 0.93881 1.21452 1.01798 0.91170 1.11185 0.91326 0.86647 0.91038 0.83028 0.86034 0.86036 0.74131 0.88258 0.91348 0.84242 0.84517 0.83257 0.83744 0.89004 0.87831 0.90172 0.76018 1.23219 1.20671 0.81671 0.82133 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.11 10.49 -92.38 -0.97 -1.08 16 3 C 0.16 0.20 6.68 22.49 0.15 0.35 16 4 C -0.25 -0.54 8.97 22.46 0.20 -0.34 16 5 C 0.17 1.00 6.66 22.49 0.15 1.15 16 6 O -0.30 -2.71 8.99 -73.35 -0.66 -3.37 16 7 C 0.03 0.00 5.22 71.24 0.37 0.37 16 8 C 0.52 2.36 7.91 87.66 0.69 3.05 16 9 O -0.57 -9.36 16.12 16.00 0.26 -9.10 16 10 N -0.69 2.34 5.26 -440.04 -2.32 0.02 16 11 C 0.11 -0.25 4.29 45.52 0.20 -0.05 16 12 H 0.08 0.27 7.50 -2.38 -0.02 0.25 16 13 C -0.14 0.46 7.27 31.22 0.23 0.68 16 14 C -0.06 0.39 3.87 -10.92 -0.04 0.34 16 15 H 0.11 -0.99 8.10 -2.39 -0.02 -1.01 16 16 C -0.07 0.17 5.29 -19.87 -0.11 0.06 16 17 C -0.10 0.03 9.45 22.28 0.21 0.24 16 18 C -0.10 -0.20 6.22 22.31 0.14 -0.06 16 19 Br -0.06 -0.18 33.70 -20.37 -0.69 -0.86 16 20 C -0.11 -0.07 9.79 22.29 0.22 0.15 16 21 C -0.11 0.21 10.05 22.27 0.22 0.43 16 22 C -0.11 0.29 8.60 22.27 0.19 0.48 16 23 C -0.12 0.80 7.29 31.12 0.23 1.03 16 24 C -0.20 -0.85 5.28 -19.75 -0.10 -0.96 16 25 C -0.07 -0.42 2.37 71.23 0.17 -0.25 16 26 O -0.56 -4.31 12.88 -148.98 -1.92 -6.23 16 27 Si 0.79 0.49 29.91 68.60 2.05 2.54 16 28 C -0.03 0.05 8.65 22.24 0.19 0.24 16 29 C -0.24 0.48 9.04 22.38 0.20 0.68 16 30 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 31 H 0.12 -1.13 8.14 -2.39 -0.02 -1.15 16 32 H 0.07 -0.66 7.66 -2.38 -0.02 -0.68 16 33 H 0.15 -0.33 6.30 -2.91 -0.02 -0.35 16 34 H 0.12 -0.70 7.66 -2.39 -0.02 -0.71 16 35 H 0.12 -0.73 7.66 -2.39 -0.02 -0.75 16 36 H 0.42 -4.52 8.70 -92.71 -0.81 -5.33 16 37 H 0.10 -0.36 6.33 -2.39 -0.02 -0.38 16 38 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 39 H 0.14 -0.38 8.06 -2.91 -0.02 -0.41 16 40 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 41 H 0.15 -0.87 8.06 -2.91 -0.02 -0.89 16 42 H 0.14 -0.87 6.68 -2.91 -0.02 -0.89 16 43 H 0.09 -0.78 8.14 -2.38 -0.02 -0.80 16 44 H 0.10 -0.69 7.71 -2.39 -0.02 -0.71 16 45 H 0.08 0.96 7.83 -2.38 -0.02 0.94 16 46 H 0.39 -0.89 8.70 -74.06 -0.64 -1.53 16 47 H -0.30 -2.66 7.11 99.48 0.71 -1.95 16 48 H -0.28 -1.20 7.11 99.48 0.71 -0.50 16 49 H 0.17 -1.32 5.11 -2.91 -0.01 -1.34 16 50 H 0.16 -1.23 6.29 -2.91 -0.02 -1.25 16 Total: 0.00 -29.76 432.77 -0.02 -29.77 By element: Atomic # 1 Polarization: -19.92 SS G_CDS: -0.40 Total: -20.32 kcal Atomic # 6 Polarization: 3.99 SS G_CDS: 4.62 Total: 8.61 kcal Atomic # 7 Polarization: 2.34 SS G_CDS: -2.32 Total: 0.02 kcal Atomic # 8 Polarization: -16.48 SS G_CDS: -3.29 Total: -19.77 kcal Atomic # 14 Polarization: 0.49 SS G_CDS: 2.05 Total: 2.54 kcal Atomic # 35 Polarization: -0.18 SS G_CDS: -0.69 Total: -0.86 kcal Total: -29.76 -0.02 -29.77 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.956 kcal (2) G-P(sol) polarization free energy of solvation -29.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.713 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.017 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.775 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds