Wall clock time and date at job start Sun Mar 7 2021 01:42:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37641 * 125.67583 * 2 1 4 4 C 1.46678 * 126.22754 * 0.26062 * 3 2 1 5 5 O 1.21698 * 119.99408 * 5.38722 * 4 3 2 6 6 N 1.34770 * 120.00244 * 185.38676 * 4 3 2 7 7 C 1.46507 * 119.99835 * 185.12524 * 6 4 3 8 8 H 1.08994 * 112.84742 * 23.80261 * 7 6 4 9 9 C 1.53777 * 113.61312 * 155.00310 * 7 6 4 10 10 C 1.53775 * 87.08386 * 89.11134 * 9 7 6 11 11 H 1.09002 * 113.61567 * 270.88092 * 10 9 7 12 12 C 1.50707 * 113.61485 * 139.98089 * 10 9 7 13 13 C 1.38196 * 119.99611 * 119.99729 * 12 10 9 14 14 C 1.38343 * 119.98876 * 180.02562 * 13 12 10 15 15 Br 1.89107 * 120.00995 * 179.97438 * 14 13 12 16 16 C 1.38301 * 119.97997 * 359.97438 * 14 13 12 17 17 C 1.38235 * 119.99126 * 0.02562 * 16 14 13 18 18 C 1.38224 * 120.01061 * 359.72265 * 17 16 14 19 19 C 1.53774 * 87.08142 * 25.43166 * 10 9 7 20 20 C 1.37888 * 107.55333 * 180.26371 * 3 2 1 21 21 C 1.39881 * 107.08843 * 359.97438 * 20 3 2 22 22 Br 1.89094 * 126.07391 * 179.97438 * 21 20 3 23 23 C 1.35509 * 107.85450 * 0.02562 * 21 20 3 24 24 C 1.50699 * 125.57347 * 180.02562 * 23 21 20 25 25 O 1.42899 * 109.47206 * 209.97334 * 24 23 21 26 26 Si 1.86299 * 109.46989 * 329.97838 * 24 23 21 27 27 H 1.08998 * 109.47093 * 263.88381 * 1 2 3 28 28 H 1.09001 * 109.46593 * 23.88340 * 1 2 3 29 29 H 1.08993 * 109.47021 * 143.88142 * 1 2 3 30 30 H 0.96995 * 120.00148 * 5.12176 * 6 4 3 31 31 H 1.09002 * 113.61506 * 203.66435 * 9 7 6 32 32 H 1.08997 * 113.61555 * 334.56119 * 9 7 6 33 33 H 1.08004 * 120.00353 * 0.02562 * 13 12 10 34 34 H 1.08008 * 120.00242 * 180.02562 * 16 14 13 35 35 H 1.08006 * 119.99630 * 179.97438 * 17 16 14 36 36 H 1.08000 * 119.98829 * 180.27316 * 18 17 16 37 37 H 1.09002 * 113.61635 * 220.01835 * 19 10 9 38 38 H 1.09004 * 113.61795 * 89.11647 * 19 10 9 39 39 H 1.07992 * 126.45613 * 179.97438 * 20 3 2 40 40 H 1.09007 * 109.46875 * 89.97250 * 24 23 21 41 41 H 0.96695 * 113.99856 * 60.00253 * 25 24 23 42 42 H 1.48499 * 109.99858 * 180.02562 * 26 24 23 43 43 H 1.48500 * 109.99731 * 301.31617 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 0.0054 5 8 0.6261 2.7644 0.1094 6 7 2.7069 3.5141 -0.1048 7 6 2.2660 4.9063 0.0131 8 1 1.3389 5.0103 0.5767 9 6 3.3761 5.8673 0.4703 10 6 3.7240 6.0475 -1.0167 11 1 4.4507 5.3238 -1.3860 12 6 4.0689 7.4668 -1.3883 13 6 5.3124 7.7603 -1.9149 14 6 5.6290 9.0633 -2.2555 15 35 7.3307 9.4658 -2.9755 16 6 4.7007 10.0713 -2.0692 17 6 3.4571 9.7767 -1.5424 18 6 3.1393 8.4740 -1.2071 19 6 2.2658 5.6676 -1.3231 20 6 3.5782 0.6892 -0.0061 21 6 3.5530 -0.7094 -0.0091 22 35 5.0610 -1.8502 -0.0182 23 6 2.2559 -1.1015 -0.0055 24 6 1.7714 -2.5285 -0.0065 25 8 0.5109 -2.6031 -0.6756 26 14 3.0089 -3.6038 -0.8914 27 1 -0.3633 -0.1095 1.0218 28 1 -0.3632 0.9397 -0.4161 29 1 -0.3633 -0.8301 -0.6057 30 1 3.6427 3.3134 -0.2622 31 1 3.0006 6.7744 0.9439 32 1 4.1633 5.3822 1.0472 33 1 6.0369 6.9727 -2.0606 34 1 4.9474 11.0886 -2.3354 35 1 2.7322 10.5640 -1.3965 36 1 2.1660 8.2435 -0.7997 37 1 2.1567 5.0211 -2.1939 38 1 1.5867 6.5200 -1.3398 39 1 4.4583 1.3151 -0.0080 40 1 1.6584 -2.8746 1.0209 41 1 0.5366 -2.3099 -1.5967 42 1 2.5424 -5.0136 -0.8998 43 1 3.1957 -3.1228 -2.2839 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:31 Heat of formation + Delta-G solvation = 39.540028 kcal Electronic energy + Delta-G solvation = -29039.297709 eV Core-core repulsion = 24759.079525 eV Total energy + Delta-G solvation = -4280.218184 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 468.968 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.95250 -41.64338 -40.24686 -38.86757 -38.02336 -35.15807 -34.43835 -33.26139 -32.58464 -31.96367 -31.13128 -30.15623 -27.56688 -27.29352 -26.91314 -26.02561 -23.75667 -23.48480 -22.60764 -21.71142 -20.78059 -20.15520 -19.04984 -18.45337 -18.06901 -17.30330 -17.21767 -16.70254 -16.39623 -16.28572 -16.10449 -15.67552 -15.55122 -15.32785 -15.18052 -14.83591 -14.64939 -14.57802 -14.56242 -14.40485 -13.97178 -13.76434 -13.66844 -13.53555 -13.23219 -13.01637 -12.71853 -12.45778 -12.43875 -12.11661 -12.09659 -12.05561 -11.63866 -11.55874 -11.46934 -11.20902 -11.16589 -10.82338 -10.29274 -9.93678 -9.92288 -9.67877 -9.36802 -4.60730 0.01930 0.13424 0.18868 0.31991 0.62793 0.89302 1.19212 1.46974 1.65601 2.01531 2.11423 2.19762 2.47593 2.98298 3.23915 3.27146 3.44284 3.45350 3.53004 3.69090 3.71231 3.79118 3.91921 3.97114 4.08152 4.15789 4.25854 4.29789 4.30154 4.34449 4.44440 4.51616 4.54522 4.55167 4.64091 4.69612 4.77964 4.82323 4.84580 4.93557 5.12981 5.14414 5.24978 5.34107 5.46802 5.53979 5.71798 5.75627 6.11359 6.26642 6.98036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.052 3.948 2 N -0.381 5.381 3 C -0.040 4.040 4 C 0.596 3.404 5 O -0.537 6.537 6 N -0.700 5.700 7 C 0.123 3.877 8 H 0.108 0.892 9 C -0.135 4.135 10 C -0.074 4.074 11 H 0.101 0.899 12 C -0.065 4.065 13 C -0.087 4.087 14 C -0.088 4.088 15 Br -0.049 7.049 16 C -0.095 4.095 17 C -0.110 4.110 18 C -0.102 4.102 19 C -0.143 4.143 20 C -0.103 4.103 21 C -0.181 4.181 22 Br 0.073 6.927 23 C 0.063 3.937 24 C -0.044 4.044 25 O -0.532 6.532 26 Si 0.582 3.418 27 H 0.082 0.918 28 H 0.106 0.894 29 H 0.104 0.896 30 H 0.405 0.595 31 H 0.101 0.899 32 H 0.080 0.920 33 H 0.132 0.868 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.130 0.870 37 H 0.077 0.923 38 H 0.097 0.903 39 H 0.159 0.841 40 H 0.130 0.870 41 H 0.378 0.622 42 H -0.231 1.231 43 H -0.248 1.248 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.715 1.476 1.247 2.583 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 N -0.052 5.052 3 C -0.155 4.155 4 C 0.384 3.616 5 O -0.415 6.415 6 N -0.351 5.351 7 C 0.018 3.982 8 H 0.126 0.874 9 C -0.173 4.173 10 C -0.093 4.093 11 H 0.119 0.881 12 C -0.066 4.066 13 C -0.107 4.107 14 C -0.167 4.167 15 Br 0.036 6.964 16 C -0.115 4.115 17 C -0.129 4.129 18 C -0.120 4.120 19 C -0.182 4.182 20 C -0.130 4.130 21 C -0.266 4.266 22 Br 0.157 6.843 23 C -0.059 4.059 24 C -0.154 4.154 25 O -0.338 6.338 26 Si 0.479 3.521 27 H 0.100 0.900 28 H 0.124 0.876 29 H 0.123 0.877 30 H 0.240 0.760 31 H 0.119 0.881 32 H 0.099 0.901 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.151 0.849 36 H 0.148 0.852 37 H 0.095 0.905 38 H 0.116 0.884 39 H 0.176 0.824 40 H 0.148 0.852 41 H 0.226 0.774 42 H -0.154 1.154 43 H -0.171 1.171 Dipole moment (debyes) X Y Z Total from point charges 1.576 0.678 0.966 1.969 hybrid contribution -1.062 0.662 -0.602 1.388 sum 0.515 1.340 0.364 1.480 Atomic orbital electron populations 1.22727 0.74368 1.06572 1.05126 1.43829 1.07491 1.03575 1.50349 1.20032 0.89764 0.87927 1.17741 1.16805 0.85596 0.83138 0.76096 1.90828 1.16002 1.84539 1.50121 1.45281 1.11380 1.04997 1.73470 1.21870 0.99182 0.79401 0.97765 0.87384 1.23446 0.98391 0.99802 0.95611 1.21629 0.97823 0.93006 0.96806 0.88119 1.19670 0.93323 0.95204 0.98436 1.21025 0.96816 0.94858 0.98019 1.21847 0.93223 0.96305 1.05320 1.96789 1.20811 1.94885 1.83901 1.21178 0.93063 0.98840 0.98398 1.21203 0.96263 0.96938 0.98447 1.21178 0.99462 0.92441 0.98959 1.23583 0.95665 1.00626 0.98313 1.21150 0.95295 0.92623 1.03920 1.20519 0.90472 0.94365 1.21265 1.96315 1.33634 1.56904 1.97434 1.20900 0.89318 0.90230 1.05493 1.24755 0.93525 0.92891 1.04195 1.86573 1.29604 1.88417 1.29173 0.93277 0.92585 0.80659 0.85591 0.89971 0.87556 0.87737 0.75977 0.88054 0.90097 0.85027 0.84955 0.84917 0.85181 0.90456 0.88421 0.82391 0.85230 0.77393 1.15434 1.17141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.01 10.21 59.85 0.61 0.62 16 2 N -0.38 -0.38 3.16 -115.58 -0.37 -0.74 16 3 C -0.04 -0.03 6.88 -81.98 -0.56 -0.59 16 4 C 0.60 0.63 7.77 -12.86 -0.10 0.53 16 5 O -0.54 -2.20 14.26 5.19 0.07 -2.12 16 6 N -0.70 1.38 5.24 -54.32 -0.28 1.09 16 7 C 0.12 -0.27 4.29 -67.12 -0.29 -0.56 16 8 H 0.11 -0.07 7.53 -51.93 -0.39 -0.47 16 9 C -0.13 0.48 7.29 -25.92 -0.19 0.29 16 10 C -0.07 0.23 3.86 -90.96 -0.35 -0.12 16 11 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 12 C -0.07 0.09 5.29 -104.63 -0.55 -0.46 16 13 C -0.09 0.03 9.45 -39.56 -0.37 -0.34 16 14 C -0.09 -0.05 6.22 -39.52 -0.25 -0.29 16 15 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.34 16 16 C -0.09 0.01 9.79 -39.56 -0.39 -0.37 16 17 C -0.11 0.13 10.05 -39.59 -0.40 -0.27 16 18 C -0.10 0.17 8.62 -39.58 -0.34 -0.17 16 19 C -0.14 0.35 7.25 -25.92 -0.19 0.17 16 20 C -0.10 0.09 10.33 -39.09 -0.40 -0.32 16 21 C -0.18 0.00 6.16 -39.94 -0.25 -0.24 16 22 Br 0.07 -0.09 28.24 -68.01 -1.92 -2.01 16 23 C 0.06 0.04 6.15 -81.90 -0.50 -0.47 16 24 C -0.04 0.00 2.99 36.01 0.11 0.10 16 25 O -0.53 -0.16 10.12 -35.23 -0.36 -0.51 16 26 Si 0.58 0.41 27.10 -169.99 -4.61 -4.20 16 27 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.11 0.12 6.11 -51.93 -0.32 -0.20 16 29 H 0.10 -0.11 5.25 -51.93 -0.27 -0.39 16 30 H 0.40 -1.74 7.65 -40.82 -0.31 -2.05 16 31 H 0.10 -0.37 7.73 -51.93 -0.40 -0.77 16 32 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 33 H 0.13 -0.19 8.06 -52.48 -0.42 -0.61 16 34 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 35 H 0.13 -0.40 8.06 -52.48 -0.42 -0.82 16 36 H 0.13 -0.43 6.64 -52.49 -0.35 -0.78 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.10 -0.28 6.30 -51.93 -0.33 -0.61 16 39 H 0.16 -0.60 7.49 -52.49 -0.39 -0.99 16 40 H 0.13 -0.09 7.96 -51.93 -0.41 -0.51 16 41 H 0.38 -0.78 8.30 45.56 0.38 -0.40 16 42 H -0.23 -0.76 7.11 56.52 0.40 -0.36 16 43 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 LS Contribution 386.29 15.07 5.82 5.82 Total: 0.00 -6.58 386.29 -13.30 -19.88 By element: Atomic # 1 Polarization: -7.40 SS G_CDS: -4.95 Total: -12.36 kcal Atomic # 6 Polarization: 1.91 SS G_CDS: -4.41 Total: -2.51 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.65 Total: 0.35 kcal Atomic # 8 Polarization: -2.35 SS G_CDS: -0.28 Total: -2.64 kcal Atomic # 14 Polarization: 0.41 SS G_CDS: -4.61 Total: -4.20 kcal Atomic # 35 Polarization: -0.14 SS G_CDS: -4.21 Total: -4.35 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -6.58 -13.30 -19.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.417 kcal (2) G-P(sol) polarization free energy of solvation -6.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.838 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.877 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.540 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds