Wall clock time and date at job start Sun Mar 7 2021 01:42:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37641 * 125.67583 * 2 1 4 4 C 1.46678 * 126.22754 * 0.26062 * 3 2 1 5 5 O 1.21698 * 119.99408 * 5.38722 * 4 3 2 6 6 N 1.34770 * 120.00244 * 185.38676 * 4 3 2 7 7 C 1.46507 * 119.99835 * 185.12524 * 6 4 3 8 8 H 1.08994 * 112.84742 * 23.80261 * 7 6 4 9 9 C 1.53777 * 113.61312 * 155.00310 * 7 6 4 10 10 C 1.53775 * 87.08386 * 89.11134 * 9 7 6 11 11 H 1.09002 * 113.61567 * 270.88092 * 10 9 7 12 12 C 1.50707 * 113.61485 * 139.98089 * 10 9 7 13 13 C 1.38196 * 119.99611 * 119.99729 * 12 10 9 14 14 C 1.38343 * 119.98876 * 180.02562 * 13 12 10 15 15 Br 1.89107 * 120.00995 * 179.97438 * 14 13 12 16 16 C 1.38301 * 119.97997 * 359.97438 * 14 13 12 17 17 C 1.38235 * 119.99126 * 0.02562 * 16 14 13 18 18 C 1.38224 * 120.01061 * 359.72265 * 17 16 14 19 19 C 1.53774 * 87.08142 * 25.43166 * 10 9 7 20 20 C 1.37888 * 107.55333 * 180.26371 * 3 2 1 21 21 C 1.39881 * 107.08843 * 359.97438 * 20 3 2 22 22 Br 1.89094 * 126.07391 * 179.97438 * 21 20 3 23 23 C 1.35509 * 107.85450 * 0.02562 * 21 20 3 24 24 C 1.50699 * 125.57347 * 180.02562 * 23 21 20 25 25 O 1.42899 * 109.47206 * 209.97334 * 24 23 21 26 26 Si 1.86299 * 109.46989 * 329.97838 * 24 23 21 27 27 H 1.08998 * 109.47093 * 263.88381 * 1 2 3 28 28 H 1.09001 * 109.46593 * 23.88340 * 1 2 3 29 29 H 1.08993 * 109.47021 * 143.88142 * 1 2 3 30 30 H 0.96995 * 120.00148 * 5.12176 * 6 4 3 31 31 H 1.09002 * 113.61506 * 203.66435 * 9 7 6 32 32 H 1.08997 * 113.61555 * 334.56119 * 9 7 6 33 33 H 1.08004 * 120.00353 * 0.02562 * 13 12 10 34 34 H 1.08008 * 120.00242 * 180.02562 * 16 14 13 35 35 H 1.08006 * 119.99630 * 179.97438 * 17 16 14 36 36 H 1.08000 * 119.98829 * 180.27316 * 18 17 16 37 37 H 1.09002 * 113.61635 * 220.01835 * 19 10 9 38 38 H 1.09004 * 113.61795 * 89.11647 * 19 10 9 39 39 H 1.07992 * 126.45613 * 179.97438 * 20 3 2 40 40 H 1.09007 * 109.46875 * 89.97250 * 24 23 21 41 41 H 0.96695 * 113.99856 * 60.00253 * 25 24 23 42 42 H 1.48499 * 109.99858 * 180.02562 * 26 24 23 43 43 H 1.48500 * 109.99731 * 301.31617 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5123 0.0054 5 8 0.6261 2.7644 0.1094 6 7 2.7069 3.5141 -0.1048 7 6 2.2660 4.9063 0.0131 8 1 1.3389 5.0103 0.5767 9 6 3.3761 5.8673 0.4703 10 6 3.7240 6.0475 -1.0167 11 1 4.4507 5.3238 -1.3860 12 6 4.0689 7.4668 -1.3883 13 6 5.3124 7.7603 -1.9149 14 6 5.6290 9.0633 -2.2555 15 35 7.3307 9.4658 -2.9755 16 6 4.7007 10.0713 -2.0692 17 6 3.4571 9.7767 -1.5424 18 6 3.1393 8.4740 -1.2071 19 6 2.2658 5.6676 -1.3231 20 6 3.5782 0.6892 -0.0061 21 6 3.5530 -0.7094 -0.0091 22 35 5.0610 -1.8502 -0.0182 23 6 2.2559 -1.1015 -0.0055 24 6 1.7714 -2.5285 -0.0065 25 8 0.5109 -2.6031 -0.6756 26 14 3.0089 -3.6038 -0.8914 27 1 -0.3633 -0.1095 1.0218 28 1 -0.3632 0.9397 -0.4161 29 1 -0.3633 -0.8301 -0.6057 30 1 3.6427 3.3134 -0.2622 31 1 3.0006 6.7744 0.9439 32 1 4.1633 5.3822 1.0472 33 1 6.0369 6.9727 -2.0606 34 1 4.9474 11.0886 -2.3354 35 1 2.7322 10.5640 -1.3965 36 1 2.1660 8.2435 -0.7997 37 1 2.1567 5.0211 -2.1939 38 1 1.5867 6.5200 -1.3398 39 1 4.4583 1.3151 -0.0080 40 1 1.6584 -2.8746 1.0209 41 1 0.5366 -2.3099 -1.5967 42 1 2.5424 -5.0136 -0.8998 43 1 3.1957 -3.1228 -2.2839 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:30 Heat of formation + Delta-G solvation = 45.419257 kcal Electronic energy + Delta-G solvation = -29039.042767 eV Core-core repulsion = 24759.079525 eV Total energy + Delta-G solvation = -4279.963242 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 468.968 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.93467 -41.50630 -40.21398 -38.79559 -38.03810 -35.11933 -34.42124 -33.20164 -32.51800 -31.88820 -31.11165 -30.09710 -27.53626 -27.27361 -26.68519 -25.91079 -23.67927 -23.40971 -22.50425 -21.67113 -20.77014 -20.00523 -19.00852 -18.42191 -17.97968 -17.25423 -17.19658 -16.60829 -16.31712 -16.27562 -16.04095 -15.67495 -15.51502 -15.30297 -15.09172 -14.72378 -14.60412 -14.55889 -14.46905 -14.27054 -14.08288 -13.74217 -13.48735 -13.39012 -13.20296 -12.88632 -12.81635 -12.46004 -12.32015 -12.05691 -12.01174 -11.90001 -11.66903 -11.53388 -11.36089 -11.21758 -11.15284 -10.84819 -10.22007 -9.88819 -9.83648 -9.59969 -9.35431 -4.69461 0.10789 0.13389 0.29533 0.34541 0.65284 0.89002 1.19605 1.43614 1.55971 1.92260 2.10858 2.24457 2.58783 3.02543 3.27231 3.44733 3.53027 3.62385 3.70111 3.75845 3.89187 3.97472 4.10421 4.11546 4.13143 4.26194 4.30820 4.33335 4.39987 4.43072 4.57856 4.65628 4.66208 4.70729 4.78801 4.85738 4.95162 4.98924 5.03810 5.13855 5.22241 5.23545 5.37824 5.46261 5.56785 5.63393 5.76431 5.85465 6.20092 6.38484 7.03131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.390 5.390 3 C -0.058 4.058 4 C 0.593 3.407 5 O -0.575 6.575 6 N -0.685 5.685 7 C 0.120 3.880 8 H 0.092 0.908 9 C -0.123 4.123 10 C -0.067 4.067 11 H 0.112 0.888 12 C -0.066 4.066 13 C -0.097 4.097 14 C -0.103 4.103 15 Br -0.062 7.062 16 C -0.109 4.109 17 C -0.114 4.114 18 C -0.105 4.105 19 C -0.141 4.141 20 C -0.090 4.090 21 C -0.190 4.190 22 Br 0.090 6.910 23 C 0.056 3.944 24 C -0.040 4.040 25 O -0.541 6.541 26 Si 0.629 3.371 27 H 0.080 0.920 28 H 0.094 0.906 29 H 0.114 0.886 30 H 0.418 0.582 31 H 0.105 0.895 32 H 0.091 0.909 33 H 0.139 0.861 34 H 0.136 0.864 35 H 0.150 0.850 36 H 0.147 0.853 37 H 0.066 0.934 38 H 0.102 0.898 39 H 0.188 0.812 40 H 0.140 0.860 41 H 0.387 0.613 42 H -0.270 1.270 43 H -0.278 1.278 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.393 1.766 1.847 3.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 N -0.062 5.062 3 C -0.172 4.172 4 C 0.382 3.618 5 O -0.456 6.456 6 N -0.336 5.336 7 C 0.014 3.986 8 H 0.110 0.890 9 C -0.161 4.161 10 C -0.086 4.086 11 H 0.130 0.870 12 C -0.067 4.067 13 C -0.117 4.117 14 C -0.182 4.182 15 Br 0.023 6.977 16 C -0.129 4.129 17 C -0.133 4.133 18 C -0.123 4.123 19 C -0.180 4.180 20 C -0.117 4.117 21 C -0.276 4.276 22 Br 0.174 6.826 23 C -0.066 4.066 24 C -0.151 4.151 25 O -0.348 6.348 26 Si 0.531 3.469 27 H 0.098 0.902 28 H 0.113 0.887 29 H 0.132 0.868 30 H 0.256 0.744 31 H 0.124 0.876 32 H 0.109 0.891 33 H 0.157 0.843 34 H 0.154 0.846 35 H 0.167 0.833 36 H 0.165 0.835 37 H 0.085 0.915 38 H 0.120 0.880 39 H 0.206 0.794 40 H 0.157 0.843 41 H 0.237 0.763 42 H -0.196 1.196 43 H -0.204 1.204 Dipole moment (debyes) X Y Z Total from point charges 2.298 0.992 1.565 2.952 hybrid contribution -1.283 0.551 -0.827 1.623 sum 1.015 1.543 0.738 1.989 Atomic orbital electron populations 1.22673 0.74384 1.06292 1.05070 1.43931 1.07702 1.03867 1.50661 1.20177 0.90402 0.87752 1.18849 1.16954 0.85380 0.83740 0.75756 1.90809 1.17577 1.85049 1.52186 1.45191 1.11670 1.04626 1.72136 1.21885 0.99251 0.79409 0.98021 0.89003 1.23396 0.97849 0.99430 0.95384 1.21632 0.97509 0.92336 0.97080 0.86992 1.19844 0.92924 0.96026 0.97909 1.21191 0.97524 0.94731 0.98243 1.21965 0.92957 0.97029 1.06254 1.96761 1.21760 1.94985 1.84163 1.21342 0.93562 0.99023 0.98932 1.21459 0.96153 0.97748 0.97942 1.21447 1.00153 0.92260 0.98450 1.23573 0.96319 1.00519 0.97580 1.21515 0.95599 0.92541 1.02030 1.20693 0.90589 0.95007 1.21271 1.96320 1.32650 1.56320 1.97330 1.20989 0.89683 0.90216 1.05746 1.24716 0.93082 0.92690 1.04565 1.86547 1.29742 1.88486 1.30041 0.92705 0.92462 0.77914 0.83855 0.90189 0.88732 0.86759 0.74421 0.87630 0.89056 0.84312 0.84640 0.83259 0.83501 0.91478 0.88014 0.79446 0.84275 0.76325 1.19561 1.20354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.06 10.21 127.77 1.30 1.37 16 2 N -0.39 -0.86 3.16 -519.60 -1.64 -2.50 16 3 C -0.06 -0.07 6.88 40.35 0.28 0.21 16 4 C 0.59 1.35 7.77 86.45 0.67 2.03 16 5 O -0.58 -5.38 14.26 -4.34 -0.06 -5.44 16 6 N -0.69 3.17 5.24 -444.00 -2.32 0.84 16 7 C 0.12 -0.58 4.29 45.51 0.20 -0.39 16 8 H 0.09 -0.09 7.53 -2.39 -0.02 -0.11 16 9 C -0.12 1.05 7.29 31.12 0.23 1.27 16 10 C -0.07 0.50 3.86 -11.02 -0.04 0.46 16 11 H 0.11 -1.07 8.10 -2.39 -0.02 -1.09 16 12 C -0.07 0.25 5.29 -19.87 -0.11 0.14 16 13 C -0.10 0.11 9.45 22.28 0.21 0.32 16 14 C -0.10 -0.13 6.22 22.31 0.14 0.01 16 15 Br -0.06 -0.15 33.70 -20.37 -0.69 -0.84 16 16 C -0.11 0.02 9.79 22.28 0.22 0.24 16 17 C -0.11 0.34 10.05 22.27 0.22 0.57 16 18 C -0.11 0.45 8.62 22.27 0.19 0.64 16 19 C -0.14 0.78 7.25 31.12 0.23 1.01 16 20 C -0.09 0.27 10.33 22.58 0.23 0.50 16 21 C -0.19 0.17 6.16 22.04 0.14 0.30 16 22 Br 0.09 -0.30 28.24 -20.37 -0.58 -0.87 16 23 C 0.06 0.05 6.15 41.35 0.25 0.31 16 24 C -0.04 -0.01 2.99 71.24 0.21 0.20 16 25 O -0.54 -0.44 10.12 -148.98 -1.51 -1.95 16 26 Si 0.63 1.25 27.10 68.60 1.86 3.11 16 27 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 28 H 0.09 0.36 6.11 -2.39 -0.01 0.34 16 29 H 0.11 -0.18 5.25 -2.39 -0.01 -0.19 16 30 H 0.42 -4.28 7.65 -92.71 -0.71 -4.99 16 31 H 0.11 -0.93 7.73 -2.39 -0.02 -0.95 16 32 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 33 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 34 H 0.14 -0.24 8.06 -2.91 -0.02 -0.26 16 35 H 0.15 -1.05 8.06 -2.91 -0.02 -1.07 16 36 H 0.15 -1.19 6.64 -2.91 -0.02 -1.21 16 37 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.10 -0.65 6.30 -2.38 -0.02 -0.66 16 39 H 0.19 -1.89 7.49 -2.91 -0.02 -1.92 16 40 H 0.14 -0.25 7.96 -2.38 -0.02 -0.27 16 41 H 0.39 -1.45 8.30 -74.06 -0.61 -2.07 16 42 H -0.27 -2.23 7.11 99.48 0.71 -1.52 16 43 H -0.28 -1.91 7.11 99.48 0.71 -1.20 16 Total: 0.00 -16.61 386.29 -0.56 -17.17 By element: Atomic # 1 Polarization: -18.53 SS G_CDS: -0.20 Total: -18.72 kcal Atomic # 6 Polarization: 4.62 SS G_CDS: 4.57 Total: 9.19 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -3.97 Total: -1.66 kcal Atomic # 8 Polarization: -5.81 SS G_CDS: -1.57 Total: -7.38 kcal Atomic # 14 Polarization: 1.25 SS G_CDS: 1.86 Total: 3.11 kcal Atomic # 35 Polarization: -0.45 SS G_CDS: -1.26 Total: -1.71 kcal Total: -16.61 -0.56 -17.17 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.590 kcal (2) G-P(sol) polarization free energy of solvation -16.607 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.982 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.563 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.170 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.419 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds