Wall clock time and date at job start Sun Mar 7 2021 01:42:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35994 * 117.00115 * 2 1 4 4 C 1.39151 * 120.07462 * 179.97438 * 3 2 1 5 5 O 1.35990 * 120.07504 * 0.02562 * 4 3 2 6 6 C 1.42903 * 117.00457 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47493 * 179.97438 * 6 5 4 8 8 O 1.21283 * 119.99819 * 0.02562 * 7 6 5 9 9 N 1.34777 * 120.00335 * 180.02562 * 7 6 5 10 10 C 1.46496 * 120.00012 * 180.02562 * 9 7 6 11 11 H 1.08993 * 112.85544 * 334.66786 * 10 9 7 12 12 C 1.53790 * 113.61285 * 105.86391 * 10 9 7 13 13 C 1.54053 * 86.98277 * 89.15779 * 12 10 9 14 14 H 1.08994 * 113.68966 * 270.86676 * 13 12 10 15 15 C 1.50703 * 113.61399 * 139.98129 * 13 12 10 16 16 C 1.38190 * 119.99563 * 142.50721 * 15 13 12 17 17 C 1.38348 * 119.99110 * 179.97438 * 16 15 13 18 18 Br 1.89104 * 120.01128 * 180.02562 * 17 16 15 19 19 C 1.38310 * 119.97940 * 359.97438 * 17 16 15 20 20 C 1.38236 * 119.98728 * 0.02562 * 19 17 16 21 21 C 1.38218 * 120.01188 * 359.72934 * 20 19 17 22 22 C 1.53777 * 87.07767 * 25.43279 * 13 12 10 23 23 C 1.38567 * 119.85390 * 180.02562 * 4 3 2 24 24 C 1.38245 * 119.99870 * 359.72061 * 23 4 3 25 25 C 1.38255 * 120.14566 * 0.55853 * 24 23 4 26 26 C 1.50699 * 119.92682 * 179.72161 * 25 24 23 27 27 O 1.42901 * 109.46830 * 119.72111 * 26 25 24 28 28 Si 1.86298 * 109.46950 * 359.72548 * 26 25 24 29 29 C 1.38241 * 120.14388 * 359.44082 * 25 24 23 30 30 H 1.08995 * 109.47937 * 59.99338 * 1 2 3 31 31 H 1.09004 * 109.46790 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.46976 * 299.98778 * 1 2 3 33 33 H 1.08996 * 109.47083 * 300.00471 * 6 5 4 34 34 H 1.09005 * 109.46866 * 59.99799 * 6 5 4 35 35 H 0.97002 * 119.99381 * 359.97438 * 9 7 6 36 36 H 1.08996 * 113.60826 * 203.66503 * 12 10 9 37 37 H 1.08998 * 113.61239 * 334.56724 * 12 10 9 38 38 H 1.08000 * 120.00673 * 359.97187 * 16 15 13 39 39 H 1.07999 * 120.00016 * 179.97438 * 19 17 16 40 40 H 1.07999 * 119.98954 * 179.97438 * 20 19 17 41 41 H 1.07999 * 119.99150 * 180.29428 * 21 20 19 42 42 H 1.09001 * 113.61207 * 220.01835 * 22 13 12 43 43 H 1.09000 * 113.61682 * 89.12283 * 22 13 12 44 44 H 1.08001 * 120.00233 * 179.97438 * 23 4 3 45 45 H 1.08003 * 119.92751 * 180.27118 * 24 23 4 46 46 H 1.08991 * 109.47351 * 239.72258 * 26 25 24 47 47 H 0.96708 * 114.00246 * 299.99864 * 27 26 25 48 48 H 1.48506 * 109.99834 * 180.02562 * 28 26 25 49 49 H 1.48502 * 110.00011 * 301.31529 * 28 26 25 50 50 H 1.08000 * 119.99962 * 180.25893 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6003 0.3007 0.0017 7 6 6.2519 -1.0581 0.0021 8 8 5.5670 -2.0591 0.0011 9 7 7.5957 -1.1612 0.0037 10 6 8.2291 -2.4821 0.0036 11 1 7.5930 -3.2566 0.4320 12 6 8.8444 -2.8702 -1.3514 13 6 10.1390 -2.1905 -0.8661 14 1 10.1912 -1.1280 -1.1033 15 6 11.3917 -2.9372 -1.2459 16 6 12.5275 -2.2400 -1.6114 17 6 13.6776 -2.9255 -1.9596 18 35 15.2324 -1.9721 -2.4592 19 6 13.6903 -4.3084 -1.9411 20 6 12.5537 -5.0050 -1.5752 21 6 11.4064 -4.3196 -1.2226 22 6 9.6602 -2.4792 0.5665 23 6 4.0602 2.5234 0.0011 24 6 3.3029 3.6799 -0.0048 25 6 1.9223 3.6057 0.0005 26 6 1.1015 4.8696 0.0004 27 8 0.2776 4.9024 -1.1667 28 14 2.2364 6.3470 0.0011 29 6 1.2932 2.3748 0.0000 30 1 -0.3635 0.5139 -0.8898 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5137 0.8901 33 1 5.9072 0.8509 -0.8877 34 1 5.9059 0.8501 0.8922 35 1 8.1435 -0.3606 0.0042 36 1 8.9431 -3.9463 -1.4938 37 1 8.3794 -2.3705 -2.2012 38 1 12.5173 -1.1602 -1.6254 39 1 14.5879 -4.8439 -2.2132 40 1 12.5634 -6.0848 -1.5612 41 1 10.5200 -4.8640 -0.9323 42 1 9.8533 -1.6641 1.2639 43 1 9.9816 -3.4486 0.9473 44 1 5.1385 2.5841 0.0019 45 1 3.7907 4.6434 -0.0088 46 1 0.4724 4.8943 0.8901 47 1 0.7718 4.8830 -1.9977 48 1 1.4391 7.5999 0.0016 49 1 3.1206 6.3078 1.1935 50 1 0.2146 2.3196 -0.0001 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:34 Heat of formation + Delta-G solvation = -44.588279 kcal Electronic energy + Delta-G solvation = -33813.287230 eV Core-core repulsion = 29013.536739 eV Total energy + Delta-G solvation = -4799.750491 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -41.87913 -41.51503 -40.51243 -39.46862 -38.93597 -38.59040 -36.91163 -34.76567 -33.17108 -32.25335 -31.89585 -31.43704 -30.18056 -29.44827 -28.45562 -26.69196 -26.35530 -25.96401 -23.74216 -23.48807 -22.72646 -22.40242 -21.79631 -20.10151 -19.77825 -18.54476 -18.46573 -18.08474 -17.79957 -17.50934 -17.19267 -16.91437 -16.66859 -16.47556 -16.14544 -16.08511 -15.86635 -15.67442 -15.53686 -15.41698 -15.04658 -14.82834 -14.59167 -14.47080 -14.32155 -14.23735 -13.77155 -13.62918 -13.55264 -13.41973 -13.32835 -12.90757 -12.63883 -12.53477 -12.32287 -12.17266 -12.06709 -12.01693 -11.99137 -11.90942 -11.73083 -11.53511 -11.35373 -11.15548 -11.00681 -10.43559 -10.15561 -9.83857 -9.78518 -9.59957 -8.90862 -4.96326 0.10435 0.17084 0.28149 0.29159 0.65005 1.34285 1.44552 1.47402 1.67312 2.00543 2.30945 2.56599 2.57068 2.58311 3.45022 3.49146 3.52423 3.62499 3.68903 3.70947 3.87262 3.88845 3.91499 3.96553 4.05551 4.11585 4.12493 4.13744 4.14681 4.28755 4.30163 4.30585 4.36818 4.42968 4.50097 4.63034 4.65135 4.66278 4.68514 4.78088 4.85010 4.95015 4.99260 5.00774 5.03228 5.12674 5.14004 5.23035 5.37398 5.37505 5.46500 5.59463 5.63885 5.84944 5.97134 6.41541 6.54603 6.77897 7.14925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.335 6.335 3 C 0.077 3.923 4 C 0.085 3.915 5 O -0.314 6.314 6 C 0.034 3.966 7 C 0.515 3.485 8 O -0.572 6.572 9 N -0.692 5.692 10 C 0.115 3.885 11 H 0.082 0.918 12 C -0.143 4.143 13 C -0.064 4.064 14 H 0.117 0.883 15 C -0.067 4.067 16 C -0.096 4.096 17 C -0.103 4.103 18 Br -0.061 7.061 19 C -0.109 4.109 20 C -0.115 4.115 21 C -0.106 4.106 22 C -0.122 4.122 23 C -0.159 4.159 24 C -0.110 4.110 25 C -0.119 4.119 26 C -0.077 4.077 27 O -0.558 6.558 28 Si 0.787 3.213 29 C -0.153 4.153 30 H 0.065 0.935 31 H 0.111 0.889 32 H 0.062 0.938 33 H 0.130 0.870 34 H 0.127 0.873 35 H 0.422 0.578 36 H 0.097 0.903 37 H 0.069 0.931 38 H 0.141 0.859 39 H 0.136 0.864 40 H 0.148 0.852 41 H 0.145 0.855 42 H 0.092 0.908 43 H 0.101 0.899 44 H 0.177 0.823 45 H 0.159 0.841 46 H 0.104 0.896 47 H 0.395 0.605 48 H -0.304 1.304 49 H -0.278 1.278 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.410 3.990 -0.818 6.003 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.031 3.969 4 C 0.039 3.961 5 O -0.228 6.228 6 C -0.044 4.044 7 C 0.301 3.699 8 O -0.450 6.450 9 N -0.346 5.346 10 C 0.010 3.990 11 H 0.100 0.900 12 C -0.181 4.181 13 C -0.082 4.082 14 H 0.135 0.865 15 C -0.067 4.067 16 C -0.115 4.115 17 C -0.182 4.182 18 Br 0.024 6.976 19 C -0.128 4.128 20 C -0.134 4.134 21 C -0.124 4.124 22 C -0.160 4.160 23 C -0.177 4.177 24 C -0.128 4.128 25 C -0.120 4.120 26 C -0.186 4.186 27 O -0.366 6.366 28 Si 0.693 3.307 29 C -0.172 4.172 30 H 0.083 0.917 31 H 0.129 0.871 32 H 0.080 0.920 33 H 0.148 0.852 34 H 0.145 0.855 35 H 0.260 0.740 36 H 0.115 0.885 37 H 0.088 0.912 38 H 0.159 0.841 39 H 0.154 0.846 40 H 0.166 0.834 41 H 0.162 0.838 42 H 0.111 0.889 43 H 0.120 0.880 44 H 0.194 0.806 45 H 0.176 0.824 46 H 0.121 0.879 47 H 0.245 0.755 48 H -0.232 1.232 49 H -0.205 1.205 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.306 3.963 -0.143 5.854 hybrid contribution -0.764 -0.484 0.404 0.990 sum 3.542 3.479 0.261 4.972 Atomic orbital electron populations 1.23277 0.76844 1.05197 1.02055 1.86187 1.22965 1.26666 1.89099 1.18671 0.89950 0.85568 1.02692 1.18581 0.88158 0.86559 1.02763 1.86221 1.18248 1.29038 1.89302 1.22786 0.79334 0.95120 1.07126 1.20565 0.82974 0.90842 0.75494 1.90778 1.64102 1.40200 1.49900 1.45328 1.05018 1.09648 1.74580 1.21845 0.94180 0.85233 0.97788 0.89977 1.23618 0.95208 1.02034 0.97264 1.21676 0.89810 1.00129 0.96618 0.86484 1.19852 0.94710 0.93806 0.98379 1.21191 0.91109 1.00846 0.98382 1.21971 0.93507 0.95254 1.07475 1.96761 1.34619 1.74955 1.91230 1.21342 1.00022 0.92156 0.99328 1.21447 0.92228 1.01370 0.98319 1.21441 0.98876 0.94002 0.98118 1.23370 0.92192 1.04498 0.95937 1.21390 1.02303 0.89279 1.04721 1.21016 0.92272 0.99038 1.00460 1.20202 0.94513 0.94797 1.02457 1.25269 0.99807 1.02516 0.90993 1.86463 1.36791 1.96943 1.16378 0.93632 0.78281 0.72390 0.86414 1.20998 1.00483 0.90598 1.05083 0.91665 0.87069 0.91967 0.85203 0.85539 0.73968 0.88451 0.91206 0.84089 0.84624 0.83381 0.83775 0.88906 0.88043 0.80569 0.82378 0.87894 0.75461 1.23209 1.20482 0.84241 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.16 16 2 O -0.33 -3.68 10.28 -79.62 -0.82 -4.50 16 3 C 0.08 0.60 6.70 22.57 0.15 0.75 16 4 C 0.08 0.42 6.70 22.57 0.15 0.57 16 5 O -0.31 -2.45 9.45 -67.02 -0.63 -3.08 16 6 C 0.03 -0.12 5.22 71.23 0.37 0.25 16 7 C 0.51 1.18 7.91 87.66 0.69 1.87 16 8 O -0.57 -8.57 16.12 16.00 0.26 -8.31 16 9 N -0.69 3.97 5.26 -440.04 -2.32 1.65 16 10 C 0.12 -0.44 4.30 45.52 0.20 -0.25 16 11 H 0.08 0.15 7.50 -2.39 -0.02 0.13 16 12 C -0.14 0.69 7.27 31.22 0.23 0.91 16 13 C -0.06 0.49 3.87 -10.92 -0.04 0.45 16 14 H 0.12 -1.26 8.09 -2.39 -0.02 -1.28 16 15 C -0.07 0.25 5.29 -19.87 -0.11 0.14 16 16 C -0.10 0.15 9.45 22.28 0.21 0.36 16 17 C -0.10 -0.11 6.22 22.31 0.14 0.03 16 18 Br -0.06 -0.13 33.70 -20.37 -0.69 -0.81 16 19 C -0.11 0.01 9.79 22.29 0.22 0.23 16 20 C -0.11 0.29 10.05 22.26 0.22 0.52 16 21 C -0.11 0.39 8.60 22.27 0.19 0.58 16 22 C -0.12 0.99 7.29 31.12 0.23 1.21 16 23 C -0.16 0.52 9.04 22.35 0.20 0.72 16 24 C -0.11 0.42 8.66 22.28 0.19 0.61 16 25 C -0.12 0.02 5.39 -19.86 -0.11 -0.09 16 26 C -0.08 0.11 2.82 71.24 0.20 0.31 16 27 O -0.56 0.20 12.77 -148.98 -1.90 -1.70 16 28 Si 0.79 -3.48 29.78 68.60 2.04 -1.44 16 29 C -0.15 -0.57 8.60 22.35 0.19 -0.37 16 30 H 0.06 0.01 7.66 -2.39 -0.02 -0.01 16 31 H 0.11 -0.02 8.14 -2.38 -0.02 -0.04 16 32 H 0.06 0.02 7.66 -2.39 -0.02 0.00 16 33 H 0.13 -1.43 7.66 -2.39 -0.02 -1.44 16 34 H 0.13 -1.32 7.66 -2.38 -0.02 -1.34 16 35 H 0.42 -5.78 8.70 -92.71 -0.81 -6.59 16 36 H 0.10 -0.47 6.33 -2.39 -0.02 -0.49 16 37 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.14 -0.60 8.05 -2.91 -0.02 -0.62 16 39 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 40 H 0.15 -0.94 8.06 -2.91 -0.02 -0.96 16 41 H 0.14 -1.00 6.68 -2.91 -0.02 -1.02 16 42 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 43 H 0.10 -0.78 7.71 -2.39 -0.02 -0.80 16 44 H 0.18 -2.08 6.30 -2.91 -0.02 -2.09 16 45 H 0.16 -1.51 4.87 -2.91 -0.01 -1.53 16 46 H 0.10 0.02 7.96 -2.39 -0.02 0.00 16 47 H 0.40 -3.33 8.70 -74.05 -0.64 -3.97 16 48 H -0.30 -1.15 7.11 99.48 0.71 -0.45 16 49 H -0.28 0.23 7.11 99.48 0.71 0.94 16 50 H 0.14 0.36 6.30 -2.91 -0.02 0.34 16 Total: 0.00 -31.06 432.94 0.19 -30.87 By element: Atomic # 1 Polarization: -22.25 SS G_CDS: -0.40 Total: -22.65 kcal Atomic # 6 Polarization: 5.32 SS G_CDS: 4.65 Total: 9.97 kcal Atomic # 7 Polarization: 3.97 SS G_CDS: -2.32 Total: 1.65 kcal Atomic # 8 Polarization: -14.49 SS G_CDS: -3.10 Total: -17.59 kcal Atomic # 14 Polarization: -3.48 SS G_CDS: 2.04 Total: -1.44 kcal Atomic # 35 Polarization: -0.13 SS G_CDS: -0.69 Total: -0.81 kcal Total: -31.06 0.19 -30.87 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.723 kcal (2) G-P(sol) polarization free energy of solvation -31.056 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.779 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.866 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds