Wall clock time and date at job start Sun Mar 7 2021 01:42:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86304 * 109.46828 * 2 1 4 4 C 1.50699 * 109.47570 * 120.00047 * 2 1 3 5 5 C 1.38250 * 119.94072 * 245.30382 * 4 2 1 6 6 C 1.38237 * 120.04290 * 180.25328 * 5 4 2 7 7 Br 1.89100 * 120.03744 * 179.71771 * 6 5 4 8 8 C 1.38796 * 119.92860 * 359.44604 * 6 5 4 9 9 O 1.35913 * 120.06010 * 180.25576 * 8 6 5 10 10 C 1.42899 * 116.99934 * 179.97438 * 9 8 6 11 11 C 1.50703 * 109.46829 * 179.97438 * 10 9 8 12 12 O 1.21279 * 120.00100 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99779 * 180.02562 * 11 10 9 14 14 C 1.46495 * 120.00153 * 179.97438 * 13 11 10 15 15 H 1.09007 * 112.85073 * 336.20169 * 14 13 11 16 16 C 1.53786 * 113.61468 * 107.50289 * 14 13 11 17 17 C 1.53774 * 87.08115 * 89.11800 * 16 14 13 18 18 H 1.08997 * 113.61703 * 270.88955 * 17 16 14 19 19 C 1.50706 * 113.69216 * 139.99400 * 17 16 14 20 20 C 1.38215 * 119.98987 * 322.18788 * 19 17 16 21 21 C 1.38271 * 120.01775 * 179.76911 * 20 19 17 22 22 C 1.38193 * 120.00946 * 0.50776 * 21 20 19 23 23 C 1.38354 * 119.98750 * 359.74697 * 22 21 20 24 24 Br 1.89099 * 120.00995 * 179.97438 * 23 22 21 25 25 C 1.38236 * 119.99746 * 142.46765 * 19 17 16 26 26 C 1.53779 * 113.61721 * 205.00149 * 14 13 11 27 27 C 1.38721 * 119.87861 * 0.27335 * 8 6 5 28 28 C 1.38146 * 119.95862 * 359.97438 * 27 8 6 29 29 H 0.96695 * 113.99664 * 299.99413 * 1 2 3 30 30 H 1.09004 * 109.47158 * 240.00386 * 2 1 3 31 31 H 1.48500 * 110.00136 * 299.99793 * 3 2 1 32 32 H 1.48498 * 110.00222 * 61.32429 * 3 2 1 33 33 H 1.07997 * 119.97780 * 359.97128 * 5 4 2 34 34 H 1.09000 * 109.47385 * 299.99629 * 10 9 8 35 35 H 1.09002 * 109.47373 * 60.00268 * 10 9 8 36 36 H 0.97005 * 120.00363 * 359.97438 * 13 11 10 37 37 H 1.09000 * 113.61738 * 203.67056 * 16 14 13 38 38 H 1.09002 * 113.61045 * 334.56913 * 16 14 13 39 39 H 1.08004 * 119.99346 * 359.97438 * 20 19 17 40 40 H 1.08000 * 119.99629 * 180.23900 * 21 20 19 41 41 H 1.07999 * 120.01035 * 179.76946 * 22 21 20 42 42 H 1.07998 * 120.00379 * 359.95488 * 25 19 17 43 43 H 1.08997 * 113.61621 * 25.43138 * 26 14 13 44 44 H 1.09006 * 113.61279 * 156.33934 * 26 14 13 45 45 H 1.08003 * 120.01703 * 180.02562 * 27 8 6 46 46 H 1.07996 * 119.96442 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 1.2304 5 6 2.6334 -0.0096 2.1935 6 6 3.0998 -0.6603 3.3205 7 35 4.0668 0.2967 4.6338 8 6 2.8527 -2.0155 3.4897 9 8 3.3055 -2.6568 4.5992 10 6 3.0137 -4.0515 4.7069 11 6 3.5908 -4.5876 5.9917 12 8 4.1923 -3.8481 6.7415 13 7 3.4385 -5.8890 6.3074 14 6 4.0000 -6.4104 7.5561 15 1 4.8317 -5.8122 7.9285 16 6 2.9393 -6.7263 8.6239 17 6 2.8556 -8.1343 8.0114 18 1 2.1250 -8.2177 7.2067 19 6 2.7271 -9.2332 9.0347 20 6 3.4201 -9.1507 10.2277 21 6 3.2989 -10.1563 11.1690 22 6 2.4930 -11.2493 10.9129 23 6 1.8032 -11.3347 9.7166 24 35 0.7008 -12.8304 9.3652 25 6 1.9207 -10.3261 8.7776 26 6 4.2955 -7.9190 7.5161 27 6 2.1430 -2.7144 2.5242 28 6 1.6836 -2.0605 1.3974 29 1 -0.3932 0.4416 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5879 2.4586 1.2243 33 1 2.8214 1.0458 2.0631 34 1 1.9336 -4.1980 4.7044 35 1 3.4543 -4.5812 3.8623 36 1 2.9571 -6.4805 5.7079 37 1 3.3281 -6.7154 9.6421 38 1 2.0227 -6.1469 8.5135 39 1 4.0539 -8.2990 10.4262 40 1 3.8376 -10.0896 12.1027 41 1 2.4012 -12.0365 11.6466 42 1 1.3822 -10.3923 7.8438 43 1 4.4736 -8.3026 6.5115 44 1 5.0550 -8.2343 8.2316 45 1 1.9491 -3.7690 2.6538 46 1 1.1314 -2.6046 0.6454 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:42 Heat of formation + Delta-G solvation = -7.313358 kcal Electronic energy + Delta-G solvation = -31394.732161 eV Core-core repulsion = 26730.999840 eV Total energy + Delta-G solvation = -4663.732321 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 495.972 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.93516 -41.50242 -40.46114 -39.42290 -38.70545 -37.37444 -34.84272 -33.52969 -33.24288 -32.35581 -32.13414 -30.54181 -30.19271 -29.54992 -26.93152 -26.62905 -26.16990 -24.20418 -23.65648 -22.82850 -22.45778 -21.91864 -20.27597 -19.63262 -18.76980 -18.32938 -18.05878 -17.63857 -17.36787 -17.01317 -16.54555 -16.52223 -16.34554 -16.25772 -15.75296 -15.69473 -15.42626 -15.19714 -14.81691 -14.78945 -14.62217 -14.44331 -14.36428 -14.06472 -14.05344 -13.67656 -13.50722 -13.41852 -13.04912 -12.53161 -12.47378 -12.36668 -12.29868 -12.12141 -12.08856 -11.82815 -11.71629 -11.65497 -11.48800 -11.22935 -11.07619 -10.99380 -10.68659 -10.28191 -10.05016 -9.95552 -9.69437 -9.35511 -5.01555 -0.09259 0.00249 0.00689 0.16780 0.60819 0.68656 1.20315 1.24006 1.37490 1.53677 1.90830 2.30991 2.33407 2.45774 3.22033 3.27431 3.30405 3.41940 3.42650 3.48058 3.61032 3.64567 3.67748 3.74698 3.79350 3.81292 3.89779 3.95751 3.97464 4.13936 4.24334 4.28350 4.36520 4.44404 4.50439 4.53494 4.54086 4.63899 4.70817 4.75644 4.80389 4.82193 4.90736 4.92318 5.11105 5.20164 5.22920 5.29693 5.35187 5.45041 5.70122 5.93036 6.22215 6.31273 6.98981 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.067 4.067 3 Si 0.677 3.323 4 C -0.149 4.149 5 C -0.051 4.051 6 C -0.119 4.119 7 Br -0.023 7.023 8 C 0.161 3.839 9 O -0.273 6.273 10 C 0.037 3.963 11 C 0.519 3.481 12 O -0.503 6.503 13 N -0.711 5.711 14 C 0.122 3.878 15 H 0.109 0.891 16 C -0.143 4.143 17 C -0.074 4.074 18 H 0.100 0.900 19 C -0.066 4.066 20 C -0.102 4.102 21 C -0.109 4.109 22 C -0.095 4.095 23 C -0.088 4.088 24 Br -0.050 7.050 25 C -0.088 4.088 26 C -0.134 4.134 27 C -0.204 4.204 28 C -0.034 4.034 29 H 0.377 0.623 30 H 0.121 0.879 31 H -0.253 1.253 32 H -0.256 1.256 33 H 0.143 0.857 34 H 0.097 0.903 35 H 0.098 0.902 36 H 0.403 0.597 37 H 0.098 0.902 38 H 0.077 0.923 39 H 0.131 0.869 40 H 0.133 0.867 41 H 0.133 0.867 42 H 0.131 0.869 43 H 0.079 0.921 44 H 0.101 0.899 45 H 0.139 0.861 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.558 -3.444 -2.008 4.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.177 4.177 3 Si 0.578 3.422 4 C -0.151 4.151 5 C -0.070 4.070 6 C -0.199 4.199 7 Br 0.062 6.938 8 C 0.113 3.887 9 O -0.185 6.185 10 C -0.041 4.041 11 C 0.303 3.697 12 O -0.376 6.376 13 N -0.365 5.365 14 C 0.016 3.984 15 H 0.127 0.873 16 C -0.182 4.182 17 C -0.093 4.093 18 H 0.118 0.882 19 C -0.067 4.067 20 C -0.120 4.120 21 C -0.128 4.128 22 C -0.115 4.115 23 C -0.167 4.167 24 Br 0.036 6.964 25 C -0.108 4.108 26 C -0.172 4.172 27 C -0.224 4.224 28 C -0.053 4.053 29 H 0.225 0.775 30 H 0.139 0.861 31 H -0.177 1.177 32 H -0.181 1.181 33 H 0.160 0.840 34 H 0.115 0.885 35 H 0.116 0.884 36 H 0.237 0.763 37 H 0.116 0.884 38 H 0.095 0.905 39 H 0.148 0.852 40 H 0.151 0.849 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.098 0.902 44 H 0.119 0.881 45 H 0.157 0.843 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 0.950 -2.471 -1.475 3.031 hybrid contribution -1.502 -0.766 -0.017 1.686 sum -0.552 -3.237 -1.492 3.607 Atomic orbital electron populations 1.86607 1.17573 1.79948 1.49408 1.24908 0.83995 1.10826 0.97970 0.95003 0.91780 0.74723 0.80741 1.20187 1.02321 0.95009 0.97573 1.20913 0.95147 0.99858 0.91114 1.20993 1.08189 0.92387 0.98372 1.96818 1.72263 1.72828 1.51885 1.18635 0.92974 0.90727 0.86353 1.86279 1.72793 1.21410 1.38005 1.22541 1.01963 0.81915 0.97715 1.19947 0.80426 0.82313 0.87000 1.90814 1.39439 1.56633 1.50693 1.45464 1.58368 1.09402 1.23252 1.21865 0.97190 0.95042 0.84257 0.87301 1.23585 1.00283 0.94989 0.99345 1.21627 0.98133 0.92708 0.96785 0.88214 1.19667 0.96638 0.95032 0.95332 1.21184 0.98768 0.98917 0.93138 1.21210 0.98375 0.93469 0.99757 1.21183 0.95907 0.98827 0.95549 1.21848 1.01386 0.95360 0.98132 1.96788 1.65468 1.38455 1.95685 1.21012 0.98521 0.92536 0.98688 1.23443 0.96460 0.94386 1.02937 1.21288 1.04230 1.00935 0.95932 1.20951 0.94901 0.93412 0.96033 0.77531 0.86083 1.17731 1.18086 0.83983 0.88471 0.88376 0.76268 0.88401 0.90465 0.85150 0.84885 0.84934 0.85090 0.90215 0.88081 0.84303 0.84485 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.08 12.83 -35.23 -0.45 -0.54 16 2 C -0.07 0.08 2.80 36.01 0.10 0.18 16 3 Si 0.68 -0.84 29.89 -169.99 -5.08 -5.92 16 4 C -0.15 0.12 5.35 -104.60 -0.56 -0.44 16 5 C -0.05 -0.01 8.40 -39.58 -0.33 -0.34 16 6 C -0.12 -0.21 6.24 -39.38 -0.25 -0.45 16 7 Br -0.02 -0.07 33.16 -68.01 -2.26 -2.32 16 8 C 0.16 0.16 6.68 -39.20 -0.26 -0.10 16 9 O -0.27 -0.51 9.00 -39.38 -0.35 -0.86 16 10 C 0.04 -0.08 5.22 36.01 0.19 0.11 16 11 C 0.52 0.07 7.91 -10.98 -0.09 -0.02 16 12 O -0.50 -2.64 16.10 -14.35 -0.23 -2.88 16 13 N -0.71 2.14 5.26 -53.02 -0.28 1.86 16 14 C 0.12 -0.29 4.32 -67.12 -0.29 -0.58 16 15 H 0.11 -0.05 7.47 -51.92 -0.39 -0.43 16 16 C -0.14 0.37 7.26 -25.92 -0.19 0.19 16 17 C -0.07 0.25 3.85 -90.96 -0.35 -0.10 16 18 H 0.10 -0.43 8.09 -51.93 -0.42 -0.85 16 19 C -0.07 0.10 5.29 -104.63 -0.55 -0.45 16 20 C -0.10 0.17 8.60 -39.58 -0.34 -0.17 16 21 C -0.11 0.13 10.05 -39.59 -0.40 -0.26 16 22 C -0.09 0.02 9.79 -39.56 -0.39 -0.37 16 23 C -0.09 -0.04 6.22 -39.52 -0.25 -0.29 16 24 Br -0.05 -0.04 33.70 -68.01 -2.29 -2.33 16 25 C -0.09 0.05 9.45 -39.56 -0.37 -0.33 16 26 C -0.13 0.50 7.29 -25.92 -0.19 0.31 16 27 C -0.20 0.29 9.04 -39.44 -0.36 -0.06 16 28 C -0.03 0.05 9.68 -39.60 -0.38 -0.34 16 29 H 0.38 -0.91 8.70 45.56 0.40 -0.52 16 30 H 0.12 -0.27 7.96 -51.93 -0.41 -0.69 16 31 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 32 H -0.26 -0.19 7.00 56.52 0.40 0.20 16 33 H 0.14 -0.13 4.83 -52.49 -0.25 -0.39 16 34 H 0.10 -0.46 7.66 -51.93 -0.40 -0.86 16 35 H 0.10 -0.48 7.66 -51.93 -0.40 -0.88 16 36 H 0.40 -2.46 8.70 -40.82 -0.36 -2.81 16 37 H 0.10 -0.27 6.33 -51.93 -0.33 -0.60 16 38 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 39 H 0.13 -0.43 6.68 -52.48 -0.35 -0.78 16 40 H 0.13 -0.40 8.06 -52.49 -0.42 -0.83 16 41 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 42 H 0.13 -0.22 8.05 -52.49 -0.42 -0.64 16 43 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 44 H 0.10 -0.37 7.71 -51.93 -0.40 -0.77 16 45 H 0.14 -0.60 6.30 -52.48 -0.33 -0.93 16 46 H 0.14 -0.36 8.06 -52.49 -0.42 -0.78 16 LS Contribution 424.10 15.07 6.39 6.39 Total: 0.00 -9.46 424.10 -15.19 -24.65 By element: Atomic # 1 Polarization: -9.15 SS G_CDS: -5.38 Total: -14.53 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -5.25 Total: -3.52 kcal Atomic # 7 Polarization: 2.14 SS G_CDS: -0.28 Total: 1.86 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -1.04 Total: -4.27 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.08 Total: -5.92 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -4.55 Total: -4.66 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -9.46 -15.19 -24.65 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.337 kcal (2) G-P(sol) polarization free energy of solvation -9.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.874 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -15.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.651 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.313 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds