Wall clock time and date at job start Sun Mar 7 2021 01:42:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86304 * 109.46828 * 2 1 4 4 C 1.50699 * 109.47570 * 120.00047 * 2 1 3 5 5 C 1.38250 * 119.94072 * 245.30382 * 4 2 1 6 6 C 1.38237 * 120.04290 * 180.25328 * 5 4 2 7 7 Br 1.89100 * 120.03744 * 179.71771 * 6 5 4 8 8 C 1.38796 * 119.92860 * 359.44604 * 6 5 4 9 9 O 1.35913 * 120.06010 * 180.25576 * 8 6 5 10 10 C 1.42899 * 116.99934 * 179.97438 * 9 8 6 11 11 C 1.50703 * 109.46829 * 179.97438 * 10 9 8 12 12 O 1.21279 * 120.00100 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99779 * 180.02562 * 11 10 9 14 14 C 1.46495 * 120.00153 * 179.97438 * 13 11 10 15 15 H 1.09007 * 112.85073 * 336.20169 * 14 13 11 16 16 C 1.53786 * 113.61468 * 107.50289 * 14 13 11 17 17 C 1.53774 * 87.08115 * 89.11800 * 16 14 13 18 18 H 1.08997 * 113.61703 * 270.88955 * 17 16 14 19 19 C 1.50706 * 113.69216 * 139.99400 * 17 16 14 20 20 C 1.38215 * 119.98987 * 322.18788 * 19 17 16 21 21 C 1.38271 * 120.01775 * 179.76911 * 20 19 17 22 22 C 1.38193 * 120.00946 * 0.50776 * 21 20 19 23 23 C 1.38354 * 119.98750 * 359.74697 * 22 21 20 24 24 Br 1.89099 * 120.00995 * 179.97438 * 23 22 21 25 25 C 1.38236 * 119.99746 * 142.46765 * 19 17 16 26 26 C 1.53779 * 113.61721 * 205.00149 * 14 13 11 27 27 C 1.38721 * 119.87861 * 0.27335 * 8 6 5 28 28 C 1.38146 * 119.95862 * 359.97438 * 27 8 6 29 29 H 0.96695 * 113.99664 * 299.99413 * 1 2 3 30 30 H 1.09004 * 109.47158 * 240.00386 * 2 1 3 31 31 H 1.48500 * 110.00136 * 299.99793 * 3 2 1 32 32 H 1.48498 * 110.00222 * 61.32429 * 3 2 1 33 33 H 1.07997 * 119.97780 * 359.97128 * 5 4 2 34 34 H 1.09000 * 109.47385 * 299.99629 * 10 9 8 35 35 H 1.09002 * 109.47373 * 60.00268 * 10 9 8 36 36 H 0.97005 * 120.00363 * 359.97438 * 13 11 10 37 37 H 1.09000 * 113.61738 * 203.67056 * 16 14 13 38 38 H 1.09002 * 113.61045 * 334.56913 * 16 14 13 39 39 H 1.08004 * 119.99346 * 359.97438 * 20 19 17 40 40 H 1.08000 * 119.99629 * 180.23900 * 21 20 19 41 41 H 1.07999 * 120.01035 * 179.76946 * 22 21 20 42 42 H 1.07998 * 120.00379 * 359.95488 * 25 19 17 43 43 H 1.08997 * 113.61621 * 25.43138 * 26 14 13 44 44 H 1.09006 * 113.61279 * 156.33934 * 26 14 13 45 45 H 1.08003 * 120.01703 * 180.02562 * 27 8 6 46 46 H 1.07996 * 119.96442 * 179.97438 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7104 1.2304 5 6 2.6334 -0.0096 2.1935 6 6 3.0998 -0.6603 3.3205 7 35 4.0668 0.2967 4.6338 8 6 2.8527 -2.0155 3.4897 9 8 3.3055 -2.6568 4.5992 10 6 3.0137 -4.0515 4.7069 11 6 3.5908 -4.5876 5.9917 12 8 4.1923 -3.8481 6.7415 13 7 3.4385 -5.8890 6.3074 14 6 4.0000 -6.4104 7.5561 15 1 4.8317 -5.8122 7.9285 16 6 2.9393 -6.7263 8.6239 17 6 2.8556 -8.1343 8.0114 18 1 2.1250 -8.2177 7.2067 19 6 2.7271 -9.2332 9.0347 20 6 3.4201 -9.1507 10.2277 21 6 3.2989 -10.1563 11.1690 22 6 2.4930 -11.2493 10.9129 23 6 1.8032 -11.3347 9.7166 24 35 0.7008 -12.8304 9.3652 25 6 1.9207 -10.3261 8.7776 26 6 4.2955 -7.9190 7.5161 27 6 2.1430 -2.7144 2.5242 28 6 1.6836 -2.0605 1.3974 29 1 -0.3932 0.4416 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5879 2.4586 1.2243 33 1 2.8214 1.0458 2.0631 34 1 1.9336 -4.1980 4.7044 35 1 3.4543 -4.5812 3.8623 36 1 2.9571 -6.4805 5.7079 37 1 3.3281 -6.7154 9.6421 38 1 2.0227 -6.1469 8.5135 39 1 4.0539 -8.2990 10.4262 40 1 3.8376 -10.0896 12.1027 41 1 2.4012 -12.0365 11.6466 42 1 1.3822 -10.3923 7.8438 43 1 4.4736 -8.3026 6.5115 44 1 5.0550 -8.2343 8.2316 45 1 1.9491 -3.7690 2.6538 46 1 1.1314 -2.6046 0.6454 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:40 Heat of formation + Delta-G solvation = -3.272079 kcal Electronic energy + Delta-G solvation = -31394.556918 eV Core-core repulsion = 26730.999840 eV Total energy + Delta-G solvation = -4663.557078 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 495.972 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -41.82613 -41.38062 -40.39699 -39.32578 -38.64644 -37.32447 -34.77365 -33.50477 -33.17289 -32.24919 -32.03236 -30.50559 -30.14209 -29.43009 -26.69508 -26.52094 -26.01698 -24.10803 -23.53494 -22.72144 -22.36015 -21.82271 -20.10572 -19.51835 -18.67405 -18.24563 -17.94856 -17.50415 -17.29926 -16.85572 -16.44107 -16.42898 -16.23915 -16.13361 -15.69899 -15.61892 -15.34408 -15.09081 -14.80831 -14.65859 -14.49935 -14.31417 -14.26473 -14.03013 -13.93758 -13.46418 -13.39352 -13.37121 -12.91120 -12.42428 -12.36083 -12.32530 -12.19954 -12.01301 -11.91603 -11.86101 -11.72838 -11.53981 -11.36573 -11.19717 -11.16384 -11.01416 -10.63042 -10.15882 -9.99511 -9.84940 -9.60930 -9.31919 -4.95202 -0.02417 0.08719 0.09444 0.28109 0.63972 0.64596 1.28385 1.39331 1.43983 1.55939 1.92268 2.39836 2.49121 2.57331 3.41741 3.44699 3.47265 3.52826 3.61483 3.68809 3.78737 3.84112 3.88211 3.95914 4.03711 4.08576 4.08995 4.10664 4.12031 4.29533 4.34767 4.41925 4.49822 4.63516 4.67632 4.68304 4.77643 4.79998 4.84600 4.94148 4.98305 5.02508 5.04400 5.13319 5.22069 5.30887 5.36456 5.44308 5.48529 5.62899 5.84024 6.06065 6.44543 6.47445 7.13680 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.062 4.062 3 Si 0.736 3.264 4 C -0.148 4.148 5 C -0.057 4.057 6 C -0.140 4.140 7 Br -0.051 7.051 8 C 0.150 3.850 9 O -0.304 6.304 10 C 0.033 3.967 11 C 0.515 3.485 12 O -0.566 6.566 13 N -0.693 5.693 14 C 0.117 3.883 15 H 0.085 0.915 16 C -0.143 4.143 17 C -0.065 4.065 18 H 0.116 0.884 19 C -0.066 4.066 20 C -0.106 4.106 21 C -0.115 4.115 22 C -0.109 4.109 23 C -0.103 4.103 24 Br -0.061 7.061 25 C -0.096 4.096 26 C -0.123 4.123 27 C -0.194 4.194 28 C -0.032 4.032 29 H 0.386 0.614 30 H 0.138 0.862 31 H -0.297 1.297 32 H -0.287 1.287 33 H 0.144 0.856 34 H 0.129 0.871 35 H 0.132 0.868 36 H 0.421 0.579 37 H 0.097 0.903 38 H 0.069 0.931 39 H 0.145 0.855 40 H 0.149 0.851 41 H 0.136 0.864 42 H 0.141 0.859 43 H 0.092 0.908 44 H 0.101 0.899 45 H 0.174 0.826 46 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.072 -5.129 -3.424 6.168 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.172 4.172 3 Si 0.642 3.358 4 C -0.150 4.150 5 C -0.077 4.077 6 C -0.220 4.220 7 Br 0.035 6.965 8 C 0.102 3.898 9 O -0.216 6.216 10 C -0.045 4.045 11 C 0.301 3.699 12 O -0.444 6.444 13 N -0.347 5.347 14 C 0.011 3.989 15 H 0.103 0.897 16 C -0.181 4.181 17 C -0.083 4.083 18 H 0.134 0.866 19 C -0.067 4.067 20 C -0.124 4.124 21 C -0.133 4.133 22 C -0.129 4.129 23 C -0.182 4.182 24 Br 0.024 6.976 25 C -0.116 4.116 26 C -0.161 4.161 27 C -0.213 4.213 28 C -0.051 4.051 29 H 0.235 0.765 30 H 0.155 0.845 31 H -0.224 1.224 32 H -0.214 1.214 33 H 0.162 0.838 34 H 0.146 0.854 35 H 0.149 0.851 36 H 0.259 0.741 37 H 0.116 0.884 38 H 0.088 0.912 39 H 0.163 0.837 40 H 0.166 0.834 41 H 0.154 0.846 42 H 0.158 0.842 43 H 0.110 0.890 44 H 0.119 0.881 45 H 0.191 0.809 46 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 0.307 -4.212 -2.903 5.125 hybrid contribution -1.338 -0.228 0.432 1.424 sum -1.031 -4.440 -2.471 5.185 Atomic orbital electron populations 1.86583 1.18164 1.80134 1.50252 1.24901 0.83463 1.10314 0.98542 0.94292 0.90969 0.73842 0.76658 1.20214 1.02028 0.95503 0.97221 1.20960 0.95520 1.00092 0.91078 1.21131 1.09318 0.93100 0.98491 1.96773 1.73058 1.73496 1.53220 1.18805 0.93565 0.90548 0.86840 1.86241 1.73374 1.23413 1.38613 1.22839 1.03889 0.80463 0.97265 1.20482 0.79477 0.82618 0.87284 1.90792 1.42471 1.58295 1.52802 1.45332 1.57437 1.08787 1.23122 1.21836 0.96771 0.95599 0.84697 0.89710 1.23571 0.99710 0.95463 0.99384 1.21632 0.98754 0.91323 0.96625 0.86611 1.19852 0.96095 0.95080 0.95717 1.21443 0.98719 0.99200 0.93045 1.21454 0.98165 0.93175 1.00554 1.21342 0.96378 0.99487 0.95655 1.21972 1.01916 0.95496 0.98856 1.96761 1.65884 1.39219 1.95730 1.21189 0.98857 0.92585 0.98946 1.23382 0.96218 0.92795 1.03667 1.21615 1.02632 1.02366 0.94734 1.21231 0.94356 0.93078 0.96388 0.76451 0.84466 1.22423 1.21358 0.83844 0.85362 0.85069 0.74064 0.88441 0.91226 0.83709 0.83358 0.84633 0.84156 0.88959 0.88053 0.80909 0.82529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.43 12.83 -148.98 -1.91 -1.48 16 2 C -0.06 0.22 2.80 71.24 0.20 0.42 16 3 Si 0.74 -1.39 29.89 68.60 2.05 0.66 16 4 C -0.15 0.41 5.35 -19.85 -0.11 0.30 16 5 C -0.06 -0.02 8.40 22.27 0.19 0.17 16 6 C -0.14 -0.56 6.24 22.40 0.14 -0.42 16 7 Br -0.05 -0.39 33.16 -20.37 -0.68 -1.07 16 8 C 0.15 0.19 6.68 22.52 0.15 0.34 16 9 O -0.30 -1.07 9.00 -73.53 -0.66 -1.73 16 10 C 0.03 -0.20 5.22 71.24 0.37 0.17 16 11 C 0.52 0.03 7.91 87.66 0.69 0.72 16 12 O -0.57 -6.92 16.10 16.01 0.26 -6.66 16 13 N -0.69 4.92 5.26 -440.03 -2.32 2.61 16 14 C 0.12 -0.57 4.32 45.52 0.20 -0.38 16 15 H 0.08 0.05 7.47 -2.38 -0.02 0.03 16 16 C -0.14 0.80 7.26 31.12 0.23 1.02 16 17 C -0.07 0.53 3.85 -11.01 -0.04 0.48 16 18 H 0.12 -1.28 8.09 -2.39 -0.02 -1.30 16 19 C -0.07 0.27 5.29 -19.87 -0.11 0.16 16 20 C -0.11 0.42 8.60 22.27 0.19 0.61 16 21 C -0.11 0.32 10.05 22.27 0.22 0.54 16 22 C -0.11 0.02 9.79 22.29 0.22 0.24 16 23 C -0.10 -0.10 6.22 22.31 0.14 0.04 16 24 Br -0.06 -0.13 33.70 -20.37 -0.69 -0.81 16 25 C -0.10 0.16 9.45 22.28 0.21 0.37 16 26 C -0.12 1.07 7.29 31.12 0.23 1.30 16 27 C -0.19 1.06 9.04 22.36 0.20 1.26 16 28 C -0.03 0.17 9.68 22.26 0.22 0.38 16 29 H 0.39 -2.10 8.70 -74.06 -0.64 -2.75 16 30 H 0.14 -0.89 7.96 -2.38 -0.02 -0.91 16 31 H -0.30 -1.61 7.11 99.48 0.71 -0.91 16 32 H -0.29 -0.86 7.00 99.48 0.70 -0.16 16 33 H 0.14 -0.14 4.83 -2.91 -0.01 -0.15 16 34 H 0.13 -1.62 7.66 -2.39 -0.02 -1.64 16 35 H 0.13 -1.71 7.66 -2.39 -0.02 -1.73 16 36 H 0.42 -6.19 8.70 -92.70 -0.81 -7.00 16 37 H 0.10 -0.54 6.33 -2.39 -0.02 -0.56 16 38 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 39 H 0.15 -1.07 6.68 -2.91 -0.02 -1.09 16 40 H 0.15 -0.98 8.06 -2.91 -0.02 -1.00 16 41 H 0.14 -0.24 8.06 -2.91 -0.02 -0.26 16 42 H 0.14 -0.60 8.05 -2.91 -0.02 -0.63 16 43 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 44 H 0.10 -0.84 7.71 -2.38 -0.02 -0.86 16 45 H 0.17 -2.25 6.30 -2.91 -0.02 -2.27 16 46 H 0.16 -1.39 8.06 -2.91 -0.02 -1.41 16 Total: 0.00 -25.85 424.10 -0.76 -26.62 By element: Atomic # 1 Polarization: -25.51 SS G_CDS: -0.36 Total: -25.87 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 3.54 Total: 7.74 kcal Atomic # 7 Polarization: 4.92 SS G_CDS: -2.32 Total: 2.61 kcal Atomic # 8 Polarization: -7.56 SS G_CDS: -2.32 Total: -9.88 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: 2.05 Total: 0.66 kcal Atomic # 35 Polarization: -0.52 SS G_CDS: -1.36 Total: -1.88 kcal Total: -25.85 -0.76 -26.62 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.344 kcal (2) G-P(sol) polarization free energy of solvation -25.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.508 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.764 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.616 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.272 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds