Wall clock time and date at job start Sun Mar 7 2021 01:42:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86301 * 109.47045 * 2 1 4 4 C 1.50695 * 109.47293 * 120.00291 * 2 1 3 5 5 C 1.35453 * 125.56434 * 244.97827 * 4 2 1 6 6 C 1.39828 * 107.86576 * 180.02562 * 5 4 2 7 7 C 1.37870 * 107.08722 * 359.75451 * 6 5 4 8 8 C 1.46684 * 126.23813 * 180.23386 * 7 6 5 9 9 O 1.21690 * 119.99554 * 0.18180 * 8 7 6 10 10 N 1.34767 * 120.00098 * 180.17546 * 8 7 6 11 11 C 1.46504 * 120.00027 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.84766 * 336.20264 * 11 10 8 13 13 C 1.53782 * 113.61361 * 107.50519 * 11 10 8 14 14 C 1.53778 * 87.08083 * 89.11931 * 13 11 10 15 15 H 1.09004 * 113.69255 * 270.87416 * 14 13 11 16 16 C 1.50700 * 113.61433 * 139.98307 * 14 13 11 17 17 C 1.38216 * 119.99486 * 142.50477 * 16 14 13 18 18 C 1.38269 * 120.02093 * 180.02562 * 17 16 14 19 19 C 1.38196 * 120.00974 * 359.95462 * 18 17 16 20 20 C 1.38352 * 119.98465 * 0.02562 * 19 18 17 21 21 Br 1.89100 * 120.00538 * 180.02562 * 20 19 18 22 22 C 1.38236 * 119.99490 * 322.22407 * 16 14 13 23 23 C 1.53777 * 113.61796 * 205.00462 * 11 10 8 24 24 N 1.35537 * 125.56451 * 64.99901 * 4 2 1 25 25 H 0.96700 * 114.00083 * 300.00170 * 1 2 3 26 26 H 1.09008 * 109.46794 * 240.00092 * 2 1 3 27 27 H 1.48503 * 109.99952 * 300.00014 * 3 2 1 28 28 H 1.48499 * 109.99764 * 61.31972 * 3 2 1 29 29 H 1.08003 * 126.06719 * 359.97438 * 5 4 2 30 30 H 1.08007 * 126.45721 * 180.02562 * 6 5 4 31 31 H 0.97005 * 120.00219 * 0.02562 * 10 8 7 32 32 H 1.08997 * 113.61555 * 203.66891 * 13 11 10 33 33 H 1.09001 * 113.61393 * 334.56735 * 13 11 10 34 34 H 1.08005 * 119.99131 * 359.97438 * 17 16 14 35 35 H 1.08000 * 119.99286 * 179.97438 * 18 17 16 36 36 H 1.07996 * 120.00500 * 180.02562 * 19 18 17 37 37 H 1.08003 * 120.00346 * 0.02562 * 22 16 14 38 38 H 1.09002 * 113.61227 * 25.42801 * 23 11 10 39 39 H 1.09001 * 113.61648 * 156.25479 * 23 11 10 40 40 H 0.97001 * 125.67560 * 359.95296 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6334 -0.1395 2.2383 6 6 2.9085 -1.1312 3.1849 7 6 2.3493 -2.3021 2.7191 8 6 2.3845 -3.6065 3.3892 9 8 2.9447 -3.7238 4.4631 10 7 1.7963 -4.6748 2.8157 11 6 1.8319 -5.9777 3.4848 12 1 2.6649 -6.0731 4.1813 13 6 0.4784 -6.4026 4.0782 14 6 0.1739 -7.0503 2.7171 15 1 -0.3061 -6.3754 2.0084 16 6 -0.5263 -8.3804 2.8246 17 6 -1.5048 -8.7221 1.9102 18 6 -2.1480 -9.9421 2.0087 19 6 -1.8121 -10.8208 3.0210 20 6 -0.8324 -10.4793 3.9363 21 35 -0.3718 -11.6816 5.3213 22 6 -0.1858 -9.2610 3.8344 23 6 1.6947 -7.1687 2.5218 24 7 1.7549 -2.0251 1.5089 25 1 -0.3933 0.4417 0.7650 26 1 1.7923 -0.5139 -0.8901 27 1 1.5615 2.4679 -1.2085 28 1 1.5879 2.4585 1.2243 29 1 2.9290 0.8975 2.2995 30 1 3.4523 -1.0030 4.1092 31 1 1.3500 -4.5813 1.9595 32 1 0.5653 -7.1205 4.8937 33 1 -0.1754 -5.5643 4.3189 34 1 -1.7677 -8.0355 1.1189 35 1 -2.9128 -10.2084 1.2941 36 1 -2.3142 -11.7739 3.0976 37 1 0.5817 -8.9956 4.5464 38 1 2.0228 -6.9488 1.5058 39 1 2.1154 -8.0958 2.9112 40 1 1.2843 -2.6635 0.9503 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:52 Heat of formation + Delta-G solvation = 37.060733 kcal Electronic energy + Delta-G solvation = -24775.927777 eV Core-core repulsion = 20990.957704 eV Total energy + Delta-G solvation = -3784.970073 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.041 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.56531 -41.50776 -40.20121 -38.81803 -37.80668 -34.86152 -33.36286 -32.30798 -31.85811 -31.17824 -30.26383 -27.27893 -26.77541 -26.02281 -23.88690 -23.23113 -22.49050 -21.60313 -21.18210 -20.23670 -19.87416 -18.33304 -17.97550 -17.17847 -16.69819 -16.58074 -16.35537 -16.13125 -16.00287 -15.37448 -15.25733 -15.11121 -14.84183 -14.56694 -14.43479 -14.38752 -14.27162 -13.97923 -13.64737 -13.53774 -13.46314 -12.96081 -12.41105 -12.33517 -12.07059 -11.95851 -11.88689 -11.59075 -11.40493 -11.34744 -11.23934 -10.82809 -10.29816 -10.07651 -9.86841 -9.64857 -9.29614 -4.82245 0.07853 0.23906 0.28323 0.61703 1.23132 1.54175 1.70127 1.86682 1.96279 2.21463 2.24603 2.54703 3.35958 3.37292 3.57513 3.59273 3.62198 3.76715 3.81536 3.89845 4.02209 4.18379 4.25155 4.25547 4.31398 4.38651 4.50910 4.53992 4.64179 4.70214 4.77097 4.89463 4.92490 4.95411 4.96633 5.05501 5.11466 5.19019 5.32265 5.42205 5.54642 5.58917 5.78447 5.81789 6.26668 6.40909 6.44547 7.01429 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.061 4.061 3 Si 0.792 3.208 4 C 0.034 3.966 5 C -0.206 4.206 6 C -0.117 4.117 7 C -0.062 4.062 8 C 0.591 3.409 9 O -0.569 6.569 10 N -0.698 5.698 11 C 0.116 3.884 12 H 0.089 0.911 13 C -0.145 4.145 14 C -0.063 4.063 15 H 0.119 0.881 16 C -0.069 4.069 17 C -0.102 4.102 18 C -0.114 4.114 19 C -0.108 4.108 20 C -0.103 4.103 21 Br -0.062 7.062 22 C -0.098 4.098 23 C -0.124 4.124 24 N -0.511 5.511 25 H 0.390 0.610 26 H 0.136 0.864 27 H -0.299 1.299 28 H -0.283 1.283 29 H 0.165 0.835 30 H 0.145 0.855 31 H 0.410 0.590 32 H 0.094 0.906 33 H 0.069 0.931 34 H 0.151 0.849 35 H 0.152 0.848 36 H 0.137 0.863 37 H 0.135 0.865 38 H 0.092 0.908 39 H 0.099 0.901 40 H 0.428 0.572 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.035 1.341 -6.681 6.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.170 4.170 3 Si 0.695 3.305 4 C -0.085 4.085 5 C -0.230 4.230 6 C -0.144 4.144 7 C -0.176 4.176 8 C 0.380 3.620 9 O -0.448 6.448 10 N -0.349 5.349 11 C 0.010 3.990 12 H 0.107 0.893 13 C -0.183 4.183 14 C -0.081 4.081 15 H 0.137 0.863 16 C -0.070 4.070 17 C -0.121 4.121 18 C -0.133 4.133 19 C -0.128 4.128 20 C -0.182 4.182 21 Br 0.023 6.977 22 C -0.118 4.118 23 C -0.162 4.162 24 N -0.108 5.108 25 H 0.239 0.761 26 H 0.154 0.846 27 H -0.227 1.227 28 H -0.209 1.209 29 H 0.183 0.817 30 H 0.162 0.838 31 H 0.247 0.753 32 H 0.112 0.888 33 H 0.087 0.913 34 H 0.169 0.831 35 H 0.170 0.830 36 H 0.155 0.845 37 H 0.153 0.847 38 H 0.111 0.889 39 H 0.117 0.883 40 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges -0.668 1.130 -6.008 6.150 hybrid contribution -1.608 -0.441 0.077 1.670 sum -2.276 0.689 -5.931 6.390 Atomic orbital electron populations 1.86579 1.18076 1.80495 1.50449 1.25033 0.83603 1.12014 0.96353 0.93299 0.90278 0.70341 0.76568 1.21246 1.03732 0.84142 0.99389 1.20942 1.06153 1.00817 0.95087 1.21488 1.01275 0.91059 1.00616 1.20251 1.10881 0.95318 0.91177 1.17232 0.77730 0.82928 0.84096 1.90853 1.46207 1.84943 1.22806 1.45393 1.56889 1.08064 1.24537 1.21871 0.98797 0.82153 0.96148 0.89330 1.23563 0.96725 1.00735 0.97289 1.21620 0.95157 0.92901 0.98405 0.86313 1.19831 0.96747 0.95733 0.94690 1.21534 0.94810 0.96991 0.98721 1.21492 1.00173 0.93737 0.97885 1.21359 0.96212 1.00942 0.94243 1.21943 1.02446 0.96248 0.97554 1.96765 1.92898 1.60416 1.47590 1.21088 0.99654 0.92024 0.99007 1.23378 0.94565 0.97561 1.00689 1.41879 1.42637 1.09615 1.16680 0.76063 0.84595 1.22677 1.20939 0.81738 0.83751 0.75312 0.88794 0.91269 0.83115 0.83050 0.84514 0.84733 0.88934 0.88259 0.73175 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.77 12.88 -148.98 -1.92 -0.15 16 2 C -0.06 0.37 3.08 71.23 0.22 0.59 16 3 Si 0.79 -4.52 30.56 68.60 2.10 -2.42 16 4 C 0.03 -0.12 6.47 41.34 0.27 0.14 16 5 C -0.21 0.27 9.32 22.01 0.21 0.47 16 6 C -0.12 -0.38 10.65 22.57 0.24 -0.14 16 7 C -0.06 -0.12 7.06 40.35 0.28 0.16 16 8 C 0.59 2.84 7.79 86.45 0.67 3.51 16 9 O -0.57 -7.90 16.48 -4.32 -0.07 -7.97 16 10 N -0.70 1.92 5.26 -444.01 -2.33 -0.42 16 11 C 0.12 -0.23 4.32 45.52 0.20 -0.03 16 12 H 0.09 0.26 7.46 -2.39 -0.02 0.24 16 13 C -0.14 0.40 7.25 31.12 0.23 0.62 16 14 C -0.06 0.39 3.86 -11.01 -0.04 0.35 16 15 H 0.12 -1.19 8.09 -2.38 -0.02 -1.21 16 16 C -0.07 0.20 5.29 -19.87 -0.11 0.09 16 17 C -0.10 0.42 9.71 22.27 0.22 0.64 16 18 C -0.11 0.33 10.05 22.27 0.22 0.55 16 19 C -0.11 -0.03 9.79 22.29 0.22 0.19 16 20 C -0.10 -0.23 6.22 22.31 0.14 -0.09 16 21 Br -0.06 -0.22 33.70 -20.37 -0.69 -0.91 16 22 C -0.10 -0.02 8.34 22.28 0.19 0.17 16 23 C -0.12 0.77 7.29 31.12 0.23 1.00 16 24 N -0.51 2.13 5.99 -171.93 -1.03 1.10 16 25 H 0.39 -2.96 8.70 -74.06 -0.64 -3.61 16 26 H 0.14 -1.22 7.96 -2.38 -0.02 -1.24 16 27 H -0.30 -0.53 7.11 99.48 0.71 0.18 16 28 H -0.28 0.26 7.11 99.48 0.71 0.97 16 29 H 0.17 -0.82 6.19 -2.91 -0.02 -0.84 16 30 H 0.14 0.60 8.06 -2.91 -0.02 0.58 16 31 H 0.41 -3.82 7.83 -92.70 -0.73 -4.54 16 32 H 0.09 -0.18 6.32 -2.39 -0.02 -0.20 16 33 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 34 H 0.15 -1.36 8.05 -2.91 -0.02 -1.39 16 35 H 0.15 -1.10 8.06 -2.91 -0.02 -1.12 16 36 H 0.14 -0.20 8.06 -2.91 -0.02 -0.23 16 37 H 0.13 -0.12 6.67 -2.91 -0.02 -0.14 16 38 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 39 H 0.10 -0.53 7.72 -2.39 -0.02 -0.54 16 40 H 0.43 -4.17 8.19 -92.71 -0.76 -4.93 16 Total: 0.00 -19.89 359.22 -1.55 -21.43 By element: Atomic # 1 Polarization: -17.92 SS G_CDS: -0.98 Total: -18.90 kcal Atomic # 6 Polarization: 4.86 SS G_CDS: 3.37 Total: 8.24 kcal Atomic # 7 Polarization: 4.05 SS G_CDS: -3.37 Total: 0.68 kcal Atomic # 8 Polarization: -6.13 SS G_CDS: -1.99 Total: -8.12 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: 2.10 Total: -2.42 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.69 Total: -0.91 kcal Total: -19.89 -1.55 -21.43 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.492 kcal (2) G-P(sol) polarization free energy of solvation -19.886 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.546 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.431 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds