Wall clock time and date at job start Sun Mar 7 2021 01:42:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35959 * 117.00346 * 2 1 4 4 C 1.39448 * 120.12089 * 180.02562 * 3 2 1 5 5 O 1.34774 * 133.24235 * 0.36316 * 4 3 2 6 6 C 1.34936 * 110.83846 * 180.02562 * 5 4 3 7 7 C 1.46992 * 125.13689 * 179.87665 * 6 5 4 8 8 O 1.21649 * 119.99748 * 179.69336 * 7 6 5 9 9 N 1.34778 * 119.99852 * 359.69285 * 7 6 5 10 10 C 1.46497 * 119.99748 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.85247 * 336.19892 * 10 9 7 12 12 C 1.53789 * 113.68870 * 107.46794 * 10 9 7 13 13 C 1.53783 * 87.07973 * 89.12859 * 12 10 9 14 14 H 1.09001 * 113.68846 * 270.86876 * 13 12 10 15 15 C 1.50698 * 113.61178 * 139.98081 * 13 12 10 16 16 C 1.38198 * 119.99068 * 142.49592 * 15 13 12 17 17 C 1.38347 * 119.98644 * 179.71997 * 16 15 13 18 18 Br 1.89101 * 120.00825 * 180.25798 * 17 16 15 19 19 C 1.38306 * 119.98358 * 0.28635 * 17 16 15 20 20 C 1.38239 * 119.98817 * 359.97438 * 19 17 16 21 21 C 1.38225 * 120.00755 * 359.97438 * 20 19 17 22 22 C 1.53776 * 87.08403 * 25.43171 * 13 12 10 23 23 C 1.35804 * 109.71714 * 359.61115 * 6 5 4 24 24 C 1.40612 * 119.13187 * 180.02562 * 4 3 2 25 25 C 1.39775 * 120.12465 * 359.97438 * 24 4 3 26 26 C 1.50697 * 120.09498 * 179.97438 * 25 24 4 27 27 O 1.42903 * 109.47146 * 285.00322 * 26 25 24 28 28 Si 1.86299 * 109.46940 * 165.00142 * 26 25 24 29 29 C 1.36634 * 119.81051 * 359.97438 * 25 24 4 30 30 C 1.38264 * 120.11974 * 0.03100 * 3 2 1 31 31 H 1.08994 * 109.47418 * 59.99386 * 1 2 3 32 32 H 1.09007 * 109.47621 * 179.97438 * 1 2 3 33 33 H 1.09006 * 109.47089 * 299.99473 * 1 2 3 34 34 H 0.97004 * 120.00453 * 0.02562 * 9 7 6 35 35 H 1.09000 * 113.60958 * 334.57556 * 12 10 9 36 36 H 1.09001 * 113.61181 * 203.67718 * 12 10 9 37 37 H 1.08002 * 120.00967 * 0.02562 * 16 15 13 38 38 H 1.07991 * 120.00662 * 179.97438 * 19 17 16 39 39 H 1.07993 * 120.00032 * 180.02562 * 20 19 17 40 40 H 1.08006 * 119.98801 * 180.02562 * 21 20 19 41 41 H 1.09002 * 113.61412 * 89.11807 * 22 13 12 42 42 H 1.09000 * 113.61787 * 220.01865 * 22 13 12 43 43 H 1.08006 * 126.94869 * 180.19620 * 23 6 5 44 44 H 1.09003 * 109.46941 * 45.00060 * 26 25 24 45 45 H 0.96702 * 113.99746 * 179.97438 * 27 26 25 46 46 H 1.48493 * 109.99900 * 60.00259 * 28 26 25 47 47 H 1.48506 * 109.99932 * 181.32140 * 28 26 25 48 48 H 1.07996 * 119.75057 * 179.97438 * 29 25 24 49 49 H 1.08005 * 119.66027 * 359.96880 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2872 -0.0005 5 8 4.4141 0.3571 -0.0073 6 6 5.6318 0.9385 -0.0039 7 6 6.9131 0.2182 -0.0068 8 8 7.9595 0.8385 -0.0089 9 7 6.9285 -1.1295 -0.0071 10 6 8.2056 -1.8474 -0.0106 11 1 9.0239 -1.2535 -0.4180 12 6 8.5405 -2.5189 1.3317 13 6 7.7845 -3.7535 0.8130 14 1 6.7188 -3.7424 1.0415 15 6 8.4458 -5.0600 1.1690 16 6 7.6739 -6.1563 1.5037 17 6 8.2810 -7.3573 1.8250 18 35 7.2251 -8.8598 2.2760 19 6 9.6603 -7.4585 1.8168 20 6 10.4318 -6.3598 1.4871 21 6 9.8248 -5.1604 1.1651 22 6 8.1153 -3.2623 -0.6062 23 6 5.4944 2.2895 -0.0032 24 6 4.0554 2.5509 0.0000 25 6 3.2766 3.7115 0.0006 26 6 3.9383 5.0655 0.0017 27 8 4.4603 5.3394 1.3035 28 14 2.6867 6.3686 -0.4523 29 6 1.9137 3.6150 0.0000 30 6 1.2958 2.3726 0.0006 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3634 -1.0277 -0.0005 33 1 -0.3633 0.5138 0.8901 34 1 6.0941 -1.6242 -0.0059 35 1 8.0639 -2.0432 2.1888 36 1 9.6067 -2.6903 1.4802 37 1 6.5968 -6.0770 1.5097 38 1 10.1345 -8.3956 2.0678 39 1 11.5088 -6.4387 1.4802 40 1 10.4278 -4.3023 0.9072 41 1 9.0652 -3.6370 -0.9876 42 1 7.2954 -3.3868 -1.3136 43 1 6.2875 3.0227 -0.0037 44 1 4.7510 5.0734 -0.7247 45 1 4.9017 6.1966 1.3779 46 1 1.5736 6.3681 0.5305 47 1 3.3341 7.7048 -0.4858 48 1 1.3129 4.5125 0.0009 49 1 0.2174 2.3120 0.0006 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:42:56 Heat of formation + Delta-G solvation = 0.397398 kcal Electronic energy + Delta-G solvation = -35496.176241 eV Core-core repulsion = 30597.461813 eV Total energy + Delta-G solvation = -4898.714428 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 458.061 amu Computer time = 1.81 seconds Orbital eigenvalues (eV) -43.78312 -41.68847 -40.76950 -40.29727 -39.02102 -38.89886 -37.22177 -34.90061 -33.69152 -33.19130 -32.23559 -31.93639 -31.00101 -30.12339 -28.59564 -26.75008 -26.71746 -26.18190 -24.93984 -24.03649 -23.53571 -22.56391 -22.05169 -21.72644 -20.15747 -19.85498 -18.94937 -18.59645 -18.44629 -18.06903 -17.75812 -17.25331 -17.03289 -16.61629 -16.57836 -16.33692 -16.21212 -15.85387 -15.80185 -15.61811 -15.13232 -14.93481 -14.65287 -14.56244 -14.50474 -14.30986 -14.22633 -14.01060 -13.94540 -13.56173 -13.44311 -13.38834 -13.24132 -12.93617 -12.54764 -12.38889 -12.36020 -12.07409 -12.06800 -11.98569 -11.74317 -11.64777 -11.57488 -11.38348 -11.19418 -11.04429 -10.49332 -10.34378 -9.86523 -9.85649 -9.62342 -9.02918 -4.90786 -0.70332 0.06891 0.08634 0.26805 0.58267 0.62579 1.14047 1.28614 1.61416 1.83172 1.85032 1.93528 2.11320 2.33976 2.56361 3.12259 3.35395 3.38499 3.53196 3.57424 3.63265 3.69704 3.79421 3.84933 3.91710 3.92966 3.96581 4.07007 4.11056 4.12259 4.27789 4.31419 4.35553 4.40182 4.41183 4.42762 4.56846 4.63577 4.74218 4.75443 4.77552 4.81153 4.83950 4.90223 4.94197 4.98403 5.01514 5.05050 5.20556 5.20892 5.28058 5.35329 5.39741 5.54808 5.58532 5.83247 6.15475 6.26165 6.57686 6.77862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.331 6.331 3 C 0.138 3.862 4 C 0.022 3.978 5 O -0.180 6.180 6 C -0.034 4.034 7 C 0.607 3.393 8 O -0.541 6.541 9 N -0.688 5.688 10 C 0.112 3.888 11 H 0.102 0.898 12 C -0.140 4.140 13 C -0.070 4.070 14 H 0.104 0.896 15 C -0.066 4.066 16 C -0.100 4.100 17 C -0.102 4.102 18 Br -0.062 7.062 19 C -0.107 4.107 20 C -0.112 4.112 21 C -0.103 4.103 22 C -0.122 4.122 23 C -0.110 4.110 24 C -0.098 4.098 25 C -0.065 4.065 26 C -0.092 4.092 27 O -0.557 6.557 28 Si 0.777 3.223 29 C -0.090 4.090 30 C -0.166 4.166 31 H 0.078 0.922 32 H 0.117 0.883 33 H 0.071 0.929 34 H 0.417 0.583 35 H 0.066 0.934 36 H 0.110 0.890 37 H 0.134 0.866 38 H 0.138 0.862 39 H 0.153 0.847 40 H 0.150 0.850 41 H 0.113 0.887 42 H 0.085 0.915 43 H 0.176 0.824 44 H 0.087 0.913 45 H 0.395 0.605 46 H -0.282 1.282 47 H -0.286 1.286 48 H 0.160 0.840 49 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.768 1.434 -3.928 5.629 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.245 6.245 3 C 0.092 3.908 4 C -0.026 4.026 5 O -0.082 6.082 6 C -0.084 4.084 7 C 0.393 3.607 8 O -0.420 6.420 9 N -0.338 5.338 10 C 0.007 3.993 11 H 0.120 0.880 12 C -0.178 4.178 13 C -0.089 4.089 14 H 0.122 0.878 15 C -0.067 4.067 16 C -0.119 4.119 17 C -0.182 4.182 18 Br 0.023 6.977 19 C -0.127 4.127 20 C -0.131 4.131 21 C -0.121 4.121 22 C -0.160 4.160 23 C -0.130 4.130 24 C -0.099 4.099 25 C -0.065 4.065 26 C -0.199 4.199 27 O -0.367 6.367 28 Si 0.681 3.319 29 C -0.108 4.108 30 C -0.185 4.185 31 H 0.096 0.904 32 H 0.135 0.865 33 H 0.090 0.910 34 H 0.254 0.746 35 H 0.085 0.915 36 H 0.128 0.872 37 H 0.152 0.848 38 H 0.156 0.844 39 H 0.170 0.830 40 H 0.168 0.832 41 H 0.131 0.869 42 H 0.104 0.896 43 H 0.193 0.807 44 H 0.105 0.895 45 H 0.245 0.755 46 H -0.209 1.209 47 H -0.213 1.213 48 H 0.178 0.822 49 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -4.037 0.896 -3.404 5.356 hybrid contribution 0.624 0.381 1.040 1.271 sum -3.413 1.277 -2.364 4.344 Atomic orbital electron populations 1.23492 0.75338 1.06053 1.03142 1.86140 1.24289 1.25663 1.88433 1.17946 0.86146 0.86793 0.99940 1.19157 0.88223 0.87064 1.08136 1.84010 1.12695 1.34953 1.76526 1.21947 0.84027 0.92737 1.09707 1.16598 0.84920 0.82689 0.76490 1.90888 1.31258 1.68178 1.51711 1.45540 1.10716 1.04796 1.72699 1.22042 0.85733 0.93253 0.98247 0.87959 1.23592 1.02297 0.94967 0.96947 1.21615 1.00026 0.90095 0.97131 0.87827 1.19801 0.93796 0.94545 0.98566 1.21167 1.00769 0.91188 0.98817 1.21952 0.94981 0.93440 1.07794 1.96754 1.69619 1.38839 1.92449 1.21359 0.91567 1.00567 0.99224 1.21478 1.01338 0.92072 0.98193 1.21457 0.94166 0.98595 0.97919 1.23403 1.04567 0.92274 0.95724 1.22851 0.95152 0.94510 1.00535 1.19596 0.92621 0.92738 1.04988 1.18658 0.93081 0.92289 1.02490 1.25142 1.06170 1.00706 0.87928 1.86572 1.77295 1.42571 1.30307 0.93966 0.76603 0.73812 0.87552 1.20833 0.93025 0.98805 0.98094 1.21348 1.01843 0.89508 1.05752 0.90373 0.86523 0.91014 0.74628 0.91525 0.87166 0.84774 0.84442 0.82959 0.83202 0.86899 0.89629 0.80684 0.89523 0.75502 1.20853 1.21330 0.82243 0.80245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -1.07 10.50 -93.09 -0.98 -2.05 16 3 C 0.14 0.60 6.70 22.57 0.15 0.75 16 4 C 0.02 0.18 7.35 23.14 0.17 0.35 16 5 O -0.18 -1.52 10.28 -13.47 -0.14 -1.66 16 6 C -0.03 -0.27 7.07 24.00 0.17 -0.10 16 7 C 0.61 4.46 7.80 86.54 0.67 5.14 16 8 O -0.54 -7.01 16.42 -4.18 -0.07 -7.08 16 9 N -0.69 -0.73 5.26 -443.69 -2.34 -3.07 16 10 C 0.11 -0.18 4.32 45.52 0.20 0.02 16 11 H 0.10 0.08 7.46 -2.39 -0.02 0.06 16 12 C -0.14 0.40 7.26 31.12 0.23 0.63 16 13 C -0.07 0.28 3.86 -11.02 -0.04 0.24 16 14 H 0.10 -0.46 8.09 -2.39 -0.02 -0.48 16 15 C -0.07 0.10 5.29 -19.87 -0.11 -0.01 16 16 C -0.10 -0.13 9.45 22.29 0.21 0.09 16 17 C -0.10 -0.30 6.22 22.31 0.14 -0.16 16 18 Br -0.06 -0.24 33.70 -20.37 -0.69 -0.93 16 19 C -0.11 -0.09 9.79 22.29 0.22 0.13 16 20 C -0.11 0.24 10.05 22.27 0.22 0.46 16 21 C -0.10 0.31 8.62 22.27 0.19 0.50 16 22 C -0.12 0.65 7.29 31.12 0.23 0.88 16 23 C -0.11 -0.87 10.68 23.79 0.25 -0.62 16 24 C -0.10 -0.74 6.16 -20.24 -0.12 -0.86 16 25 C -0.06 -0.24 5.30 -19.87 -0.11 -0.35 16 26 C -0.09 -0.04 2.70 71.23 0.19 0.16 16 27 O -0.56 -1.90 12.86 -148.98 -1.92 -3.81 16 28 Si 0.78 -2.74 30.20 68.60 2.07 -0.67 16 29 C -0.09 0.01 8.62 22.02 0.19 0.20 16 30 C -0.17 0.17 9.03 22.40 0.20 0.37 16 31 H 0.08 -0.74 7.66 -2.39 -0.02 -0.76 16 32 H 0.12 -1.01 8.14 -2.38 -0.02 -1.03 16 33 H 0.07 -0.61 7.66 -2.38 -0.02 -0.62 16 34 H 0.42 -0.81 8.42 -92.71 -0.78 -1.59 16 35 H 0.07 -0.01 8.14 -2.39 -0.02 -0.02 16 36 H 0.11 -0.56 6.30 -2.39 -0.02 -0.57 16 37 H 0.13 -0.02 8.05 -2.91 -0.02 -0.05 16 38 H 0.14 -0.14 8.06 -2.92 -0.02 -0.17 16 39 H 0.15 -1.00 8.06 -2.91 -0.02 -1.02 16 40 H 0.15 -1.09 6.64 -2.91 -0.02 -1.11 16 41 H 0.11 -0.79 7.73 -2.39 -0.02 -0.81 16 42 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 43 H 0.18 1.07 8.06 -2.91 -0.02 1.04 16 44 H 0.09 -0.19 7.96 -2.39 -0.02 -0.21 16 45 H 0.39 -1.87 8.74 -74.06 -0.65 -2.52 16 46 H -0.28 -0.34 6.75 99.48 0.67 0.33 16 47 H -0.29 -0.28 7.11 99.48 0.71 0.43 16 48 H 0.16 -0.75 4.85 -2.91 -0.01 -0.76 16 49 H 0.18 -1.48 6.26 -2.91 -0.02 -1.50 16 Total: 0.00 -22.25 430.87 -0.06 -22.31 By element: Atomic # 1 Polarization: -11.50 SS G_CDS: -0.38 Total: -11.88 kcal Atomic # 6 Polarization: 4.46 SS G_CDS: 4.37 Total: 8.83 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: -2.34 Total: -3.07 kcal Atomic # 8 Polarization: -11.50 SS G_CDS: -3.10 Total: -14.60 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: 2.07 Total: -0.67 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.69 Total: -0.93 kcal Total: -22.25 -0.06 -22.31 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.708 kcal (2) G-P(sol) polarization free energy of solvation -22.253 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.058 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.311 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.81 seconds