Wall clock time and date at job start Sun Mar 7 2021 01:43:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.33817 * 122.45162 * 2 1 4 4 C 1.50697 * 124.52076 * 0.02562 * 3 2 1 5 5 O 1.42903 * 109.47441 * 314.93499 * 4 3 2 6 6 Si 1.86299 * 109.47104 * 194.93270 * 4 3 2 7 7 S 1.70608 * 110.95371 * 179.70137 * 3 2 1 8 8 C 1.75833 * 91.56587 * 0.35024 * 7 3 2 9 9 C 1.46583 * 125.45710 * 179.91006 * 8 7 3 10 10 O 1.21699 * 119.99706 * 179.69695 * 9 8 7 11 11 N 1.34774 * 120.00371 * 359.70393 * 9 8 7 12 12 C 1.46496 * 120.00328 * 179.97438 * 11 9 8 13 13 H 1.09000 * 112.84793 * 23.79742 * 12 11 9 14 14 C 1.53775 * 113.61780 * 154.99519 * 12 11 9 15 15 C 1.53778 * 87.08200 * 89.11694 * 14 12 11 16 16 H 1.09005 * 113.61264 * 270.80370 * 15 14 12 17 17 C 1.50699 * 113.61791 * 139.98070 * 15 14 12 18 18 C 1.38202 * 119.99130 * 119.99733 * 17 15 14 19 19 C 1.38351 * 119.98276 * 180.02562 * 18 17 15 20 20 Br 1.89103 * 120.00533 * 179.97438 * 19 18 17 21 21 C 1.38295 * 119.98262 * 0.25164 * 19 18 17 22 22 C 1.38237 * 119.99033 * 359.51716 * 21 19 18 23 23 C 1.38218 * 120.01175 * 0.48636 * 22 21 19 24 24 C 1.53776 * 87.08123 * 25.43399 * 15 14 12 25 25 C 1.36647 * 109.08067 * 359.65626 * 8 7 3 26 26 H 1.08999 * 109.47674 * 275.77970 * 1 2 3 27 27 H 1.09007 * 109.46843 * 35.78066 * 1 2 3 28 28 H 1.09000 * 109.47160 * 155.77780 * 1 2 3 29 29 H 1.09005 * 109.46986 * 74.93225 * 4 3 2 30 30 H 0.96701 * 114.00037 * 180.02562 * 5 4 3 31 31 H 1.48497 * 110.00103 * 60.00287 * 6 4 3 32 32 H 1.48505 * 109.99955 * 181.32339 * 6 4 3 33 33 H 0.97002 * 119.99530 * 359.97438 * 11 9 8 34 34 H 1.09004 * 113.61330 * 334.56509 * 14 12 11 35 35 H 1.09009 * 113.61705 * 203.66438 * 14 12 11 36 36 H 1.07992 * 120.00979 * 0.02562 * 18 17 15 37 37 H 1.08001 * 120.00452 * 179.72172 * 21 19 18 38 38 H 1.08003 * 119.99279 * 180.24951 * 22 21 19 39 39 H 1.08000 * 119.99234 * 179.77058 * 23 22 21 40 40 H 1.08999 * 113.61931 * 89.12060 * 24 15 14 41 41 H 1.09008 * 113.61642 * 220.02212 * 24 15 14 42 42 H 1.07995 * 123.34810 * 180.28851 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 0.5730 2.5825 -0.9528 6 14 2.9543 3.7516 -0.4523 7 16 3.8968 0.7891 0.0083 8 6 3.5936 -0.9428 0.0011 9 6 4.6231 -1.9863 0.0016 10 8 4.3001 -3.1597 0.0018 11 7 5.9272 -1.6464 0.0021 12 6 6.9561 -2.6893 0.0032 13 1 6.5992 -3.6363 -0.4017 14 6 8.2980 -2.2315 -0.5919 15 6 8.6820 -1.7766 0.8260 16 1 8.3896 -0.7506 1.0496 17 6 10.1160 -2.0682 1.1860 18 6 10.9692 -1.0328 1.5177 19 6 12.2858 -1.3006 1.8476 20 35 13.4540 0.1157 2.3008 21 6 12.7488 -2.6037 1.8403 22 6 11.8934 -3.6391 1.5131 23 6 10.5781 -3.3713 1.1834 24 6 7.6898 -2.8294 1.3475 25 6 2.2445 -1.1601 0.0005 26 1 -0.3634 0.1035 1.0224 27 1 -0.3633 0.8338 -0.6009 28 1 -0.3633 -0.9372 -0.4216 29 1 1.2479 2.7457 0.9931 30 1 0.1466 3.4488 -1.0067 31 1 3.4909 3.4495 -1.8035 32 1 2.3935 5.1264 -0.4241 33 1 6.1846 -0.7112 0.0017 34 1 8.2030 -1.4109 -1.3030 35 1 8.9108 -3.0505 -0.9686 36 1 10.6083 -0.0150 1.5193 37 1 13.7778 -2.8127 2.0935 38 1 12.2539 -4.6572 1.5113 39 1 9.9110 -4.1801 0.9242 40 1 8.1361 -3.8119 1.5011 41 1 7.1036 -2.4914 2.2021 42 1 1.8019 -2.1452 0.0011 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:43:04 Heat of formation + Delta-G solvation = 21.500420 kcal Electronic energy + Delta-G solvation = -26355.326747 eV Core-core repulsion = 22440.496326 eV Total energy + Delta-G solvation = -3914.830421 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.018 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.69879 -40.53651 -39.75196 -38.79528 -37.56461 -34.71910 -33.20834 -32.48800 -31.84726 -30.20767 -30.12665 -27.18212 -26.84968 -25.81759 -24.35729 -23.59270 -22.59176 -21.88467 -20.30500 -19.84926 -19.26677 -18.70319 -18.12288 -17.37345 -17.10370 -16.60079 -16.35519 -16.08019 -15.96909 -15.86364 -15.21250 -15.00533 -14.81853 -14.64873 -14.52547 -14.47267 -14.36529 -14.22404 -13.62985 -13.50657 -13.25907 -13.06422 -13.05209 -12.89154 -12.56114 -12.41066 -12.24607 -12.05757 -12.02327 -11.91960 -11.59736 -11.42057 -11.17608 -11.10725 -10.75438 -10.20124 -9.90274 -9.70903 -9.64143 -9.38083 -5.26654 -0.60004 0.05303 0.21959 0.26866 0.65264 0.66598 1.01531 1.33656 1.43566 1.76975 1.96179 2.18187 2.51121 3.05660 3.30622 3.49399 3.55541 3.58158 3.71202 3.77235 3.84085 3.96676 4.00882 4.12839 4.19430 4.24260 4.33751 4.41014 4.52371 4.56794 4.59546 4.61003 4.71394 4.82049 4.82608 4.86051 4.90269 4.90348 5.00387 5.07342 5.16152 5.28516 5.39300 5.41641 5.49474 5.52572 5.75183 6.23189 6.34227 7.09865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.087 4.087 3 C -0.193 4.193 4 C -0.033 4.033 5 O -0.525 6.525 6 Si 0.650 3.350 7 S 0.200 5.800 8 C -0.263 4.263 9 C 0.597 3.403 10 O -0.523 6.523 11 N -0.711 5.711 12 C 0.121 3.879 13 H 0.110 0.890 14 C -0.136 4.136 15 C -0.075 4.075 16 H 0.100 0.900 17 C -0.065 4.065 18 C -0.088 4.088 19 C -0.088 4.088 20 Br -0.050 7.050 21 C -0.095 4.095 22 C -0.110 4.110 23 C -0.102 4.102 24 C -0.143 4.143 25 C -0.046 4.046 26 H 0.067 0.933 27 H 0.092 0.908 28 H 0.065 0.935 29 H 0.089 0.911 30 H 0.383 0.617 31 H -0.237 1.237 32 H -0.238 1.238 33 H 0.399 0.601 34 H 0.079 0.921 35 H 0.101 0.899 36 H 0.132 0.868 37 H 0.132 0.868 38 H 0.133 0.867 39 H 0.131 0.869 40 H 0.098 0.902 41 H 0.078 0.922 42 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.386 3.116 1.337 3.413 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.100 4.100 3 C -0.312 4.312 4 C -0.144 4.144 5 O -0.334 6.334 6 Si 0.548 3.452 7 S 0.468 5.532 8 C -0.383 4.383 9 C 0.384 3.616 10 O -0.400 6.400 11 N -0.362 5.362 12 C 0.015 3.985 13 H 0.128 0.872 14 C -0.174 4.174 15 C -0.093 4.093 16 H 0.119 0.881 17 C -0.066 4.066 18 C -0.107 4.107 19 C -0.167 4.167 20 Br 0.035 6.965 21 C -0.115 4.115 22 C -0.128 4.128 23 C -0.120 4.120 24 C -0.182 4.182 25 C -0.079 4.079 26 H 0.086 0.914 27 H 0.110 0.890 28 H 0.084 0.916 29 H 0.106 0.894 30 H 0.232 0.768 31 H -0.160 1.160 32 H -0.161 1.161 33 H 0.234 0.766 34 H 0.098 0.902 35 H 0.119 0.881 36 H 0.150 0.850 37 H 0.150 0.850 38 H 0.151 0.849 39 H 0.148 0.852 40 H 0.116 0.884 41 H 0.096 0.904 42 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 2.363 3.728 0.853 4.495 hybrid contribution -2.445 -0.273 -0.362 2.487 sum -0.082 3.455 0.491 3.490 Atomic orbital electron populations 1.20726 0.88922 1.03922 1.02741 1.18697 0.98434 0.90624 1.02278 1.23196 0.98084 0.98487 1.11443 1.24029 0.96738 0.97973 0.95661 1.86571 1.48546 1.37076 1.61188 0.95500 0.83467 0.79208 0.87045 1.82603 1.02725 0.98742 1.69106 1.24565 0.97917 0.96739 1.19053 1.16911 0.81473 0.87412 0.75830 1.90860 1.81505 1.18166 1.49439 1.45513 1.05031 1.09746 1.75891 1.21869 0.86962 0.92453 0.97179 0.87238 1.23450 0.95512 1.02425 0.95967 1.21635 0.90545 1.00266 0.96877 0.88132 1.19679 0.95080 0.92921 0.98872 1.21026 0.91479 0.99828 0.98409 1.21840 0.94855 0.93292 1.06715 1.96783 1.62313 1.45113 1.92244 1.21170 1.00555 0.90889 0.98901 1.21200 0.93479 0.99274 0.98894 1.21183 0.95809 0.96413 0.98608 1.23587 0.96931 0.99731 0.97938 1.20724 0.90898 1.00111 0.96195 0.91400 0.88980 0.91634 0.89379 0.76814 1.16038 1.16092 0.76612 0.90220 0.88066 0.85017 0.84979 0.84925 0.85150 0.88395 0.90372 0.82694 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.05 9.74 36.00 0.35 0.30 16 2 C -0.09 -0.13 5.75 -106.45 -0.61 -0.74 16 3 C -0.19 -0.10 5.64 -35.86 -0.20 -0.30 16 4 C -0.03 0.04 2.69 36.00 0.10 0.14 16 5 O -0.53 0.38 10.16 -35.23 -0.36 0.02 16 6 Si 0.65 -1.25 30.99 -169.99 -5.27 -6.52 16 7 S 0.20 -0.17 19.36 -107.50 -2.08 -2.25 16 8 C -0.26 -0.44 6.45 -36.79 -0.24 -0.68 16 9 C 0.60 1.58 7.78 -12.90 -0.10 1.48 16 10 O -0.52 -3.26 16.44 5.19 0.09 -3.17 16 11 N -0.71 0.32 5.26 -54.36 -0.29 0.04 16 12 C 0.12 -0.12 4.32 -67.12 -0.29 -0.42 16 13 H 0.11 0.05 7.46 -51.93 -0.39 -0.33 16 14 C -0.14 0.36 7.29 -25.92 -0.19 0.17 16 15 C -0.07 0.18 3.86 -90.96 -0.35 -0.17 16 16 H 0.10 -0.33 8.09 -51.93 -0.42 -0.75 16 17 C -0.06 0.07 5.29 -104.63 -0.55 -0.49 16 18 C -0.09 0.01 9.45 -39.55 -0.37 -0.36 16 19 C -0.09 -0.06 6.22 -39.52 -0.25 -0.31 16 20 Br -0.05 -0.05 33.70 -68.01 -2.29 -2.34 16 21 C -0.10 -0.01 9.79 -39.56 -0.39 -0.39 16 22 C -0.11 0.10 10.05 -39.59 -0.40 -0.30 16 23 C -0.10 0.13 8.61 -39.58 -0.34 -0.21 16 24 C -0.14 0.25 7.25 -25.92 -0.19 0.07 16 25 C -0.05 -0.10 9.78 -40.44 -0.40 -0.49 16 26 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 27 H 0.09 0.08 5.48 -51.93 -0.28 -0.21 16 28 H 0.06 0.01 8.10 -51.93 -0.42 -0.42 16 29 H 0.09 -0.27 7.96 -51.93 -0.41 -0.68 16 30 H 0.38 -1.80 8.74 45.56 0.40 -1.41 16 31 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 32 H -0.24 0.11 7.11 56.52 0.40 0.51 16 33 H 0.40 -1.06 7.81 -40.82 -0.32 -1.38 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.10 -0.29 7.72 -51.92 -0.40 -0.70 16 36 H 0.13 -0.17 8.05 -52.49 -0.42 -0.59 16 37 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.13 -0.37 8.06 -52.48 -0.42 -0.79 16 39 H 0.13 -0.38 6.66 -52.49 -0.35 -0.73 16 40 H 0.10 -0.22 6.31 -51.93 -0.33 -0.55 16 41 H 0.08 -0.07 8.14 -51.92 -0.42 -0.49 16 42 H 0.16 0.30 8.06 -52.49 -0.42 -0.12 16 LS Contribution 381.09 15.07 5.74 5.74 Total: 0.00 -7.41 381.09 -13.96 -21.36 By element: Atomic # 1 Polarization: -5.09 SS G_CDS: -5.08 Total: -10.18 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -4.42 Total: -2.71 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.29 Total: 0.04 kcal Atomic # 8 Polarization: -2.88 SS G_CDS: -0.27 Total: -3.15 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.27 Total: -6.52 kcal Atomic # 16 Polarization: -0.17 SS G_CDS: -2.08 Total: -2.25 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.34 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -7.41 -13.96 -21.36 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.862 kcal (2) G-P(sol) polarization free energy of solvation -7.406 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.955 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.361 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.500 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds