Wall clock time and date at job start Sun Mar 7 2021 01:43:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86296 * 109.47013 * 2 1 4 4 C 1.50699 * 109.46842 * 120.00204 * 2 1 3 5 5 C 1.34232 * 126.49893 * 254.97400 * 4 2 1 6 6 N 1.36835 * 109.93917 * 180.02562 * 5 4 2 7 7 C 1.46500 * 125.06455 * 179.97438 * 6 5 4 8 8 C 1.50696 * 109.47173 * 265.02556 * 7 6 5 9 9 O 1.21280 * 120.00487 * 359.97438 * 8 7 6 10 10 N 1.34781 * 119.99783 * 180.02562 * 8 7 6 11 11 C 1.46504 * 119.99665 * 179.97438 * 10 8 7 12 12 H 1.08994 * 112.90940 * 336.24759 * 11 10 8 13 13 C 1.53779 * 113.61484 * 107.49929 * 11 10 8 14 14 C 1.53785 * 87.08093 * 89.11287 * 13 11 10 15 15 H 1.09002 * 113.61570 * 270.88522 * 14 13 11 16 16 C 1.50701 * 113.69000 * 139.98979 * 14 13 11 17 17 C 1.38196 * 119.99499 * 140.93495 * 16 14 13 18 18 C 1.38346 * 119.99055 * 180.02562 * 17 16 14 19 19 Br 1.89102 * 120.00968 * 180.02562 * 18 17 16 20 20 C 1.38296 * 119.98072 * 359.97438 * 18 17 16 21 21 C 1.38234 * 119.99090 * 0.02562 * 20 18 17 22 22 C 1.38225 * 120.01070 * 359.72148 * 21 20 18 23 23 C 1.53781 * 87.08241 * 25.43228 * 14 13 11 24 24 C 1.37690 * 109.87378 * 0.26251 * 6 5 4 25 25 C 1.39082 * 133.51548 * 179.73350 * 24 6 5 26 26 C 1.37791 * 119.78084 * 180.02562 * 25 24 6 27 27 C 1.38790 * 120.66479 * 0.02562 * 26 25 24 28 28 C 1.36662 * 120.52684 * 359.57389 * 27 26 25 29 29 C 1.39598 * 119.76390 * 0.66380 * 28 27 26 30 30 H 0.96695 * 113.99887 * 299.99489 * 1 2 3 31 31 H 1.09000 * 109.46798 * 240.00023 * 2 1 3 32 32 H 1.48496 * 110.00386 * 300.00259 * 3 2 1 33 33 H 1.48504 * 110.00024 * 61.31956 * 3 2 1 34 34 H 1.08001 * 125.03147 * 359.97438 * 5 4 2 35 35 H 1.09003 * 109.47111 * 145.02504 * 7 6 5 36 36 H 1.09007 * 109.46861 * 25.02666 * 7 6 5 37 37 H 0.96996 * 120.00382 * 359.97438 * 10 8 7 38 38 H 1.09003 * 113.61775 * 334.57164 * 13 11 10 39 39 H 1.08996 * 113.61960 * 203.65890 * 13 11 10 40 40 H 1.08007 * 120.00378 * 359.97438 * 17 16 14 41 41 H 1.08002 * 120.00793 * 179.97438 * 20 18 17 42 42 H 1.08004 * 119.99891 * 179.97438 * 21 20 18 43 43 H 1.08000 * 119.99590 * 180.30000 * 22 21 20 44 44 H 1.09005 * 113.61302 * 89.11252 * 23 14 13 45 45 H 1.08996 * 113.61527 * 219.93415 * 23 14 13 46 46 H 1.08000 * 120.10751 * 0.02562 * 25 24 6 47 47 H 1.07998 * 119.66615 * 179.97438 * 26 25 24 48 48 H 1.07998 * 119.73263 * 180.02562 * 27 26 25 49 49 H 1.08004 * 120.11579 * 179.91804 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4612 -0.1377 2.3227 6 7 2.8035 -1.0992 3.2342 7 6 3.4093 -0.8407 4.5429 8 6 4.9075 -0.9629 4.4359 9 8 5.4190 -1.2392 3.3715 10 7 5.6790 -0.7661 5.5234 11 6 7.1354 -0.8855 5.4195 12 1 7.4514 -1.5117 4.5852 13 6 7.8707 0.4633 5.4903 14 6 7.9104 0.2723 7.0157 15 1 7.0386 0.6776 7.5293 16 6 9.2114 0.6984 7.6456 17 6 9.2083 1.3489 8.8649 18 6 10.4027 1.7405 9.4429 19 35 10.3990 2.6300 11.1116 20 6 11.5993 1.4803 8.8003 21 6 11.6016 0.8296 7.5807 22 6 10.4083 0.4338 7.0061 23 6 7.8209 -1.2397 6.7498 24 6 2.4998 -2.3462 2.7357 25 6 2.6416 -3.6371 3.2334 26 6 2.2324 -4.7120 2.4746 27 6 1.6795 -4.5204 1.2161 28 6 1.5234 -3.2602 0.7109 29 6 1.9359 -2.1572 1.4605 30 1 -0.3933 0.4416 0.7650 31 1 1.7924 -0.5138 -0.8900 32 1 1.5615 2.4679 -1.2084 33 1 1.5879 2.4585 1.2243 34 1 2.5979 0.9246 2.4612 35 1 3.0362 -1.5663 5.2656 36 1 3.1493 0.1658 4.8711 37 1 5.2700 -0.5455 6.3748 38 1 7.2620 1.3097 5.1720 39 1 8.8552 0.4491 5.0227 40 1 8.2734 1.5522 9.3662 41 1 12.5320 1.7862 9.2509 42 1 12.5360 0.6267 7.0786 43 1 10.4107 -0.0788 6.0556 44 1 8.7918 -1.7196 6.6265 45 1 7.1731 -1.7684 7.4490 46 1 3.0711 -3.7965 4.2115 47 1 2.3437 -5.7136 2.8628 48 1 1.3634 -5.3737 0.6344 49 1 1.0936 -3.1189 -0.2698 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:43:25 Heat of formation + Delta-G solvation = 62.428813 kcal Electronic energy + Delta-G solvation = -33010.367204 eV Core-core repulsion = 28530.743514 eV Total energy + Delta-G solvation = -4479.623690 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.073 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -42.52395 -41.71277 -40.42717 -39.00548 -38.03740 -37.57421 -34.87151 -34.04029 -33.23915 -32.25164 -31.31560 -30.21218 -30.13533 -28.98844 -26.95222 -26.54947 -25.58524 -23.77629 -23.62790 -22.96160 -22.47524 -21.86540 -20.62547 -20.25103 -18.84034 -18.52779 -18.08440 -17.73167 -17.33401 -17.02701 -16.53537 -16.43906 -16.32510 -16.21840 -16.00454 -15.54827 -15.45173 -15.26847 -14.87690 -14.76637 -14.64821 -14.58148 -14.48242 -14.31103 -14.01105 -13.86950 -13.67489 -13.49013 -13.25987 -13.05955 -12.61097 -12.49675 -12.46432 -12.29623 -12.14575 -12.11248 -11.89346 -11.67155 -11.63966 -11.50714 -11.24385 -11.14879 -10.44051 -10.36443 -10.29747 -9.97117 -9.70954 -9.04014 -8.55047 -4.87549 -0.01342 0.15175 0.26296 0.59466 0.77976 1.33062 1.36943 1.38932 1.60907 1.68525 2.01741 2.04412 2.44109 3.09660 3.20730 3.37227 3.39555 3.43594 3.52147 3.57972 3.67146 3.71574 3.75263 3.78279 3.84328 3.87969 3.94089 4.04905 4.12246 4.26751 4.30355 4.35638 4.42351 4.48661 4.51570 4.58403 4.62011 4.71203 4.73964 4.77918 4.79858 4.79999 4.88799 4.89201 4.98338 5.09602 5.21356 5.24412 5.29480 5.43213 5.63408 5.68515 5.79438 5.84958 5.88713 6.11003 6.28310 6.34768 6.58637 6.95426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.192 4.192 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.494 3.506 9 O -0.508 6.508 10 N -0.712 5.712 11 C 0.120 3.880 12 H 0.107 0.893 13 C -0.142 4.142 14 C -0.074 4.074 15 H 0.099 0.901 16 C -0.066 4.066 17 C -0.088 4.088 18 C -0.088 4.088 19 Br -0.049 7.049 20 C -0.095 4.095 21 C -0.109 4.109 22 C -0.102 4.102 23 C -0.135 4.135 24 C 0.109 3.891 25 C -0.128 4.128 26 C -0.096 4.096 27 C -0.145 4.145 28 C -0.065 4.065 29 C -0.086 4.086 30 H 0.372 0.628 31 H 0.114 0.886 32 H -0.256 1.256 33 H -0.260 1.260 34 H 0.168 0.832 35 H 0.118 0.882 36 H 0.122 0.878 37 H 0.402 0.598 38 H 0.076 0.924 39 H 0.097 0.903 40 H 0.131 0.869 41 H 0.133 0.867 42 H 0.133 0.867 43 H 0.130 0.870 44 H 0.100 0.900 45 H 0.078 0.922 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.053 0.471 4.235 4.730 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.147 4.147 3 Si 0.583 3.417 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.278 3.722 9 O -0.382 6.382 10 N -0.365 5.365 11 C 0.015 3.985 12 H 0.125 0.875 13 C -0.181 4.181 14 C -0.092 4.092 15 H 0.117 0.883 16 C -0.067 4.067 17 C -0.108 4.108 18 C -0.167 4.167 19 Br 0.036 6.964 20 C -0.114 4.114 21 C -0.128 4.128 22 C -0.120 4.120 23 C -0.173 4.173 24 C 0.005 3.995 25 C -0.148 4.148 26 C -0.115 4.115 27 C -0.164 4.164 28 C -0.083 4.083 29 C -0.090 4.090 30 H 0.220 0.780 31 H 0.132 0.868 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.185 0.815 35 H 0.136 0.864 36 H 0.140 0.860 37 H 0.237 0.763 38 H 0.095 0.905 39 H 0.115 0.885 40 H 0.149 0.851 41 H 0.151 0.849 42 H 0.151 0.849 43 H 0.148 0.852 44 H 0.118 0.882 45 H 0.097 0.903 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 2.423 1.219 3.805 4.673 hybrid contribution -1.006 -0.157 0.935 1.383 sum 1.417 1.062 4.740 5.060 Atomic orbital electron populations 1.86608 1.18151 1.79969 1.48956 1.24283 0.83282 1.09813 0.97363 0.95034 0.91782 0.74475 0.80388 1.20581 1.09752 0.92356 0.97314 1.21577 1.00937 0.94004 0.89374 1.43200 1.52611 1.04665 1.14439 1.21582 0.90706 1.05852 0.85341 1.21008 0.89426 0.77306 0.84461 1.90820 1.74561 1.45239 1.27544 1.45629 1.06432 1.72350 1.12097 1.21857 0.79240 0.97941 0.99464 0.87493 1.23566 1.01750 0.98199 0.94551 1.21618 0.94980 0.96590 0.96000 0.88252 1.19672 0.94883 0.97974 0.94183 1.21015 0.96899 0.97714 0.95140 1.21846 0.96356 1.04019 0.94485 1.96790 1.99306 1.76643 1.23643 1.21181 0.96910 0.98083 0.95272 1.21210 0.98667 0.97905 0.95025 1.21174 0.91789 0.99023 1.00006 1.23440 1.01970 0.95416 0.96467 1.18167 1.01245 0.85813 0.94321 1.19951 1.05012 0.89235 1.00646 1.20829 0.98324 0.97935 0.94449 1.20675 1.02378 0.96936 0.96459 1.20313 0.97922 0.90902 0.99183 1.18937 1.03314 0.92770 0.93988 0.78039 0.86778 1.18016 1.18532 0.81471 0.86405 0.85986 0.76311 0.90523 0.88491 0.85100 0.84926 0.84874 0.85190 0.88181 0.90292 0.86763 0.85730 0.85916 0.85905 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.33 12.88 -35.23 -0.45 -1.79 16 2 C -0.04 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.15 30.82 -169.99 -5.24 -5.39 16 4 C -0.19 -0.43 5.58 -102.71 -0.57 -1.00 16 5 C 0.07 0.05 9.89 -16.73 -0.17 -0.12 16 6 N -0.47 -0.41 2.27 -115.71 -0.26 -0.68 16 7 C 0.09 -0.27 6.48 -5.20 -0.03 -0.30 16 8 C 0.49 -0.43 7.90 -10.99 -0.09 -0.52 16 9 O -0.51 -2.09 16.02 5.56 0.09 -2.00 16 10 N -0.71 2.59 5.26 -53.02 -0.28 2.31 16 11 C 0.12 -0.33 4.32 -67.11 -0.29 -0.62 16 12 H 0.11 -0.06 7.47 -51.93 -0.39 -0.45 16 13 C -0.14 0.43 7.26 -25.92 -0.19 0.24 16 14 C -0.07 0.27 3.85 -90.96 -0.35 -0.08 16 15 H 0.10 -0.46 8.09 -51.93 -0.42 -0.88 16 16 C -0.07 0.12 5.29 -104.63 -0.55 -0.44 16 17 C -0.09 0.06 9.45 -39.56 -0.37 -0.31 16 18 C -0.09 -0.02 6.22 -39.52 -0.25 -0.27 16 19 Br -0.05 -0.04 33.70 -68.01 -2.29 -2.33 16 20 C -0.09 0.04 9.79 -39.56 -0.39 -0.35 16 21 C -0.11 0.15 10.05 -39.59 -0.40 -0.24 16 22 C -0.10 0.19 8.53 -39.58 -0.34 -0.15 16 23 C -0.13 0.53 7.29 -25.92 -0.19 0.34 16 24 C 0.11 0.34 6.79 -83.99 -0.57 -0.23 16 25 C -0.13 -0.29 10.00 -39.43 -0.39 -0.68 16 26 C -0.10 -0.19 10.01 -39.54 -0.40 -0.59 16 27 C -0.15 -0.35 9.97 -39.95 -0.40 -0.75 16 28 C -0.06 -0.22 10.05 -39.64 -0.40 -0.62 16 29 C -0.09 -0.34 6.35 -105.14 -0.67 -1.00 16 30 H 0.37 -0.20 8.70 45.56 0.40 0.20 16 31 H 0.11 0.14 7.96 -51.93 -0.41 -0.27 16 32 H -0.26 -0.76 7.11 56.52 0.40 -0.36 16 33 H -0.26 -0.17 7.00 56.52 0.40 0.23 16 34 H 0.17 -0.31 6.27 -52.49 -0.33 -0.64 16 35 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 36 H 0.12 -0.74 8.12 -51.93 -0.42 -1.16 16 37 H 0.40 -2.63 8.70 -40.82 -0.36 -2.98 16 38 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 39 H 0.10 -0.30 6.41 -51.93 -0.33 -0.63 16 40 H 0.13 -0.24 8.05 -52.48 -0.42 -0.66 16 41 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 42 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 43 H 0.13 -0.45 6.73 -52.49 -0.35 -0.81 16 44 H 0.10 -0.37 7.62 -51.93 -0.40 -0.77 16 45 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 46 H 0.11 0.03 8.06 -52.49 -0.42 -0.39 16 47 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 48 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 49 H 0.12 0.31 8.06 -52.48 -0.42 -0.11 16 LS Contribution 430.08 15.07 6.48 6.48 Total: 0.00 -10.06 430.08 -15.29 -25.34 By element: Atomic # 1 Polarization: -7.88 SS G_CDS: -6.44 Total: -14.33 kcal Atomic # 6 Polarization: -0.74 SS G_CDS: -6.89 Total: -7.63 kcal Atomic # 7 Polarization: 2.17 SS G_CDS: -0.54 Total: 1.63 kcal Atomic # 8 Polarization: -3.42 SS G_CDS: -0.36 Total: -3.78 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.24 Total: -5.39 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.29 Total: -2.33 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -10.06 -15.29 -25.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.772 kcal (2) G-P(sol) polarization free energy of solvation -10.055 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.716 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -15.287 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.343 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds