Wall clock time and date at job start Sun Mar 7 2021 01:43:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86296 * 109.47013 * 2 1 4 4 C 1.50699 * 109.46842 * 120.00204 * 2 1 3 5 5 C 1.34232 * 126.49893 * 254.97400 * 4 2 1 6 6 N 1.36835 * 109.93917 * 180.02562 * 5 4 2 7 7 C 1.46500 * 125.06455 * 179.97438 * 6 5 4 8 8 C 1.50696 * 109.47173 * 265.02556 * 7 6 5 9 9 O 1.21280 * 120.00487 * 359.97438 * 8 7 6 10 10 N 1.34781 * 119.99783 * 180.02562 * 8 7 6 11 11 C 1.46504 * 119.99665 * 179.97438 * 10 8 7 12 12 H 1.08994 * 112.90940 * 336.24759 * 11 10 8 13 13 C 1.53779 * 113.61484 * 107.49929 * 11 10 8 14 14 C 1.53785 * 87.08093 * 89.11287 * 13 11 10 15 15 H 1.09002 * 113.61570 * 270.88522 * 14 13 11 16 16 C 1.50701 * 113.69000 * 139.98979 * 14 13 11 17 17 C 1.38196 * 119.99499 * 140.93495 * 16 14 13 18 18 C 1.38346 * 119.99055 * 180.02562 * 17 16 14 19 19 Br 1.89102 * 120.00968 * 180.02562 * 18 17 16 20 20 C 1.38296 * 119.98072 * 359.97438 * 18 17 16 21 21 C 1.38234 * 119.99090 * 0.02562 * 20 18 17 22 22 C 1.38225 * 120.01070 * 359.72148 * 21 20 18 23 23 C 1.53781 * 87.08241 * 25.43228 * 14 13 11 24 24 C 1.37690 * 109.87378 * 0.26251 * 6 5 4 25 25 C 1.39082 * 133.51548 * 179.73350 * 24 6 5 26 26 C 1.37791 * 119.78084 * 180.02562 * 25 24 6 27 27 C 1.38790 * 120.66479 * 0.02562 * 26 25 24 28 28 C 1.36662 * 120.52684 * 359.57389 * 27 26 25 29 29 C 1.39598 * 119.76390 * 0.66380 * 28 27 26 30 30 H 0.96695 * 113.99887 * 299.99489 * 1 2 3 31 31 H 1.09000 * 109.46798 * 240.00023 * 2 1 3 32 32 H 1.48496 * 110.00386 * 300.00259 * 3 2 1 33 33 H 1.48504 * 110.00024 * 61.31956 * 3 2 1 34 34 H 1.08001 * 125.03147 * 359.97438 * 5 4 2 35 35 H 1.09003 * 109.47111 * 145.02504 * 7 6 5 36 36 H 1.09007 * 109.46861 * 25.02666 * 7 6 5 37 37 H 0.96996 * 120.00382 * 359.97438 * 10 8 7 38 38 H 1.09003 * 113.61775 * 334.57164 * 13 11 10 39 39 H 1.08996 * 113.61960 * 203.65890 * 13 11 10 40 40 H 1.08007 * 120.00378 * 359.97438 * 17 16 14 41 41 H 1.08002 * 120.00793 * 179.97438 * 20 18 17 42 42 H 1.08004 * 119.99891 * 179.97438 * 21 20 18 43 43 H 1.08000 * 119.99590 * 180.30000 * 22 21 20 44 44 H 1.09005 * 113.61302 * 89.11252 * 23 14 13 45 45 H 1.08996 * 113.61527 * 219.93415 * 23 14 13 46 46 H 1.08000 * 120.10751 * 0.02562 * 25 24 6 47 47 H 1.07998 * 119.66615 * 179.97438 * 26 25 24 48 48 H 1.07998 * 119.73263 * 180.02562 * 27 26 25 49 49 H 1.08004 * 120.11579 * 179.91804 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.4612 -0.1377 2.3227 6 7 2.8035 -1.0992 3.2342 7 6 3.4093 -0.8407 4.5429 8 6 4.9075 -0.9629 4.4359 9 8 5.4190 -1.2392 3.3715 10 7 5.6790 -0.7661 5.5234 11 6 7.1354 -0.8855 5.4195 12 1 7.4514 -1.5117 4.5852 13 6 7.8707 0.4633 5.4903 14 6 7.9104 0.2723 7.0157 15 1 7.0386 0.6776 7.5293 16 6 9.2114 0.6984 7.6456 17 6 9.2083 1.3489 8.8649 18 6 10.4027 1.7405 9.4429 19 35 10.3990 2.6300 11.1116 20 6 11.5993 1.4803 8.8003 21 6 11.6016 0.8296 7.5807 22 6 10.4083 0.4338 7.0061 23 6 7.8209 -1.2397 6.7498 24 6 2.4998 -2.3462 2.7357 25 6 2.6416 -3.6371 3.2334 26 6 2.2324 -4.7120 2.4746 27 6 1.6795 -4.5204 1.2161 28 6 1.5234 -3.2602 0.7109 29 6 1.9359 -2.1572 1.4605 30 1 -0.3933 0.4416 0.7650 31 1 1.7924 -0.5138 -0.8900 32 1 1.5615 2.4679 -1.2084 33 1 1.5879 2.4585 1.2243 34 1 2.5979 0.9246 2.4612 35 1 3.0362 -1.5663 5.2656 36 1 3.1493 0.1658 4.8711 37 1 5.2700 -0.5455 6.3748 38 1 7.2620 1.3097 5.1720 39 1 8.8552 0.4491 5.0227 40 1 8.2734 1.5522 9.3662 41 1 12.5320 1.7862 9.2509 42 1 12.5360 0.6267 7.0786 43 1 10.4107 -0.0788 6.0556 44 1 8.7918 -1.7196 6.6265 45 1 7.1731 -1.7684 7.4490 46 1 3.0711 -3.7965 4.2115 47 1 2.3437 -5.7136 2.8628 48 1 1.3634 -5.3737 0.6344 49 1 1.0936 -3.1189 -0.2698 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:43:23 Heat of formation + Delta-G solvation = 66.912908 kcal Electronic energy + Delta-G solvation = -33010.172759 eV Core-core repulsion = 28530.743514 eV Total energy + Delta-G solvation = -4479.429245 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 441.073 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -42.54049 -41.53694 -40.33430 -38.87313 -38.13991 -37.65409 -34.75373 -34.03161 -33.14900 -32.12550 -31.34826 -30.23709 -30.12587 -28.94373 -26.67845 -26.42473 -25.54890 -23.80490 -23.53559 -22.93171 -22.40279 -21.78106 -20.67882 -20.04403 -18.70908 -18.54918 -17.93455 -17.73755 -17.31632 -16.87595 -16.41749 -16.40352 -16.32306 -16.11142 -16.04714 -15.51854 -15.46033 -15.14071 -14.84134 -14.71836 -14.68429 -14.51460 -14.38176 -14.21790 -14.06990 -13.69620 -13.50362 -13.40127 -13.11060 -12.89776 -12.71498 -12.56487 -12.39569 -12.32360 -12.00386 -11.99703 -11.90908 -11.73236 -11.52809 -11.36269 -11.15439 -11.12634 -10.54466 -10.44820 -10.11509 -9.84501 -9.60373 -9.15365 -8.62824 -4.86362 0.09851 0.14875 0.28521 0.64380 0.64655 1.35343 1.41423 1.47707 1.58289 1.69193 1.97593 2.20329 2.57767 2.95793 3.46599 3.54030 3.59689 3.62533 3.65554 3.72183 3.76522 3.84979 3.89278 3.97805 4.04631 4.11487 4.12355 4.15609 4.22662 4.29999 4.30649 4.42443 4.50580 4.59592 4.64848 4.68634 4.72421 4.78730 4.79624 4.85812 4.90593 4.94923 4.99329 5.04174 5.14555 5.15146 5.22667 5.37069 5.47756 5.51673 5.64557 5.67216 5.74239 5.75854 5.84504 6.19551 6.24324 6.49623 6.60610 7.16896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.050 4.050 3 Si 0.765 3.235 4 C -0.216 4.216 5 C 0.075 3.925 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.495 3.505 9 O -0.566 6.566 10 N -0.695 5.695 11 C 0.118 3.882 12 H 0.082 0.918 13 C -0.140 4.140 14 C -0.065 4.065 15 H 0.115 0.885 16 C -0.067 4.067 17 C -0.097 4.097 18 C -0.103 4.103 19 Br -0.062 7.062 20 C -0.109 4.109 21 C -0.115 4.115 22 C -0.105 4.105 23 C -0.125 4.125 24 C 0.092 3.908 25 C -0.133 4.133 26 C -0.107 4.107 27 C -0.154 4.154 28 C -0.088 4.088 29 C -0.116 4.116 30 H 0.384 0.616 31 H 0.103 0.897 32 H -0.302 1.302 33 H -0.259 1.259 34 H 0.197 0.803 35 H 0.143 0.857 36 H 0.161 0.839 37 H 0.420 0.580 38 H 0.072 0.928 39 H 0.095 0.905 40 H 0.140 0.860 41 H 0.135 0.865 42 H 0.149 0.851 43 H 0.145 0.855 44 H 0.098 0.902 45 H 0.089 0.911 46 H 0.133 0.867 47 H 0.145 0.855 48 H 0.136 0.864 49 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.090 0.956 5.994 6.419 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.159 4.159 3 Si 0.668 3.332 4 C -0.223 4.223 5 C -0.051 4.051 6 N -0.148 5.148 7 C -0.038 4.038 8 C 0.281 3.719 9 O -0.443 6.443 10 N -0.348 5.348 11 C 0.012 3.988 12 H 0.100 0.900 13 C -0.178 4.178 14 C -0.083 4.083 15 H 0.133 0.867 16 C -0.068 4.068 17 C -0.116 4.116 18 C -0.182 4.182 19 Br 0.023 6.977 20 C -0.129 4.129 21 C -0.134 4.134 22 C -0.124 4.124 23 C -0.163 4.163 24 C -0.013 4.013 25 C -0.154 4.154 26 C -0.126 4.126 27 C -0.173 4.173 28 C -0.107 4.107 29 C -0.120 4.120 30 H 0.232 0.768 31 H 0.121 0.879 32 H -0.230 1.230 33 H -0.184 1.184 34 H 0.214 0.786 35 H 0.161 0.839 36 H 0.179 0.821 37 H 0.258 0.742 38 H 0.091 0.909 39 H 0.114 0.886 40 H 0.158 0.842 41 H 0.153 0.847 42 H 0.166 0.834 43 H 0.163 0.837 44 H 0.117 0.883 45 H 0.108 0.892 46 H 0.151 0.849 47 H 0.163 0.837 48 H 0.154 0.846 49 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 2.463 1.691 5.647 6.388 hybrid contribution -0.993 -0.344 0.355 1.109 sum 1.470 1.347 6.001 6.324 Atomic orbital electron populations 1.86563 1.19102 1.80601 1.49851 1.24579 0.82794 1.11606 0.96922 0.94058 0.90419 0.71132 0.77621 1.20699 1.11338 0.91899 0.98363 1.22002 0.99242 0.95169 0.88664 1.43429 1.51999 1.03793 1.15573 1.21982 0.88875 1.08918 0.84000 1.21362 0.90349 0.76208 0.83993 1.90809 1.75638 1.48133 1.29731 1.45489 1.06001 1.70998 1.12331 1.21785 0.79772 0.97895 0.99314 0.89976 1.23540 1.01581 0.97683 0.95024 1.21627 0.94671 0.96655 0.95360 0.86670 1.19871 0.95719 0.97387 0.93796 1.21192 0.96941 0.97870 0.95619 1.21968 0.97107 1.04812 0.94325 1.96763 1.99330 1.76984 1.24577 1.21337 0.96979 0.98671 0.95890 1.21455 0.99671 0.97503 0.94725 1.21433 0.91696 0.98702 1.00527 1.23384 1.01943 0.95331 0.95683 1.18390 1.01559 0.86992 0.94401 1.20246 1.04613 0.89060 1.01455 1.21131 0.98180 0.99032 0.94295 1.20915 1.02307 0.96997 0.97043 1.20449 0.99090 0.91709 0.99426 1.19337 1.03976 0.93779 0.94905 0.76752 0.87882 1.23030 1.18441 0.78647 0.83949 0.82107 0.74224 0.90900 0.88643 0.84204 0.84670 0.83353 0.83722 0.88310 0.89250 0.84881 0.83717 0.84647 0.86406 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.60 12.88 -148.98 -1.92 -5.52 16 2 C -0.05 -0.20 3.06 71.24 0.22 0.02 16 3 Si 0.76 -0.39 30.82 68.60 2.11 1.72 16 4 C -0.22 -1.14 5.58 -18.63 -0.10 -1.25 16 5 C 0.07 0.05 9.89 83.00 0.82 0.87 16 6 N -0.47 -0.38 2.27 -520.00 -1.18 -1.56 16 7 C 0.09 -0.72 6.48 85.63 0.55 -0.17 16 8 C 0.50 -1.51 7.90 87.66 0.69 -0.81 16 9 O -0.57 -4.77 16.02 -3.03 -0.05 -4.82 16 10 N -0.69 6.32 5.26 -440.03 -2.32 4.00 16 11 C 0.12 -0.75 4.32 45.52 0.20 -0.56 16 12 H 0.08 -0.05 7.47 -2.39 -0.02 -0.07 16 13 C -0.14 1.00 7.26 31.12 0.23 1.23 16 14 C -0.06 0.59 3.85 -11.01 -0.04 0.54 16 15 H 0.12 -1.37 8.09 -2.39 -0.02 -1.39 16 16 C -0.07 0.31 5.29 -19.87 -0.11 0.21 16 17 C -0.10 0.21 9.45 22.29 0.21 0.42 16 18 C -0.10 -0.06 6.22 22.31 0.14 0.08 16 19 Br -0.06 -0.11 33.70 -20.37 -0.69 -0.80 16 20 C -0.11 0.07 9.79 22.28 0.22 0.29 16 21 C -0.11 0.38 10.05 22.27 0.22 0.60 16 22 C -0.11 0.49 8.53 22.27 0.19 0.68 16 23 C -0.13 1.17 7.29 31.12 0.23 1.40 16 24 C 0.09 0.60 6.79 39.03 0.27 0.86 16 25 C -0.13 -0.61 10.00 22.37 0.22 -0.38 16 26 C -0.11 -0.47 10.01 22.30 0.22 -0.25 16 27 C -0.15 -0.96 9.97 22.03 0.22 -0.74 16 28 C -0.09 -0.81 10.05 22.23 0.22 -0.59 16 29 C -0.12 -1.09 6.35 -20.20 -0.13 -1.22 16 30 H 0.38 -0.07 8.70 -74.06 -0.64 -0.71 16 31 H 0.10 0.52 7.96 -2.39 -0.02 0.50 16 32 H -0.30 -2.20 7.11 99.48 0.71 -1.49 16 33 H -0.26 0.17 7.00 99.48 0.70 0.87 16 34 H 0.20 -1.19 6.27 -2.91 -0.02 -1.21 16 35 H 0.14 -1.86 8.14 -2.39 -0.02 -1.88 16 36 H 0.16 -2.60 8.12 -2.38 -0.02 -2.62 16 37 H 0.42 -6.73 8.70 -92.71 -0.81 -7.53 16 38 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 39 H 0.10 -0.65 6.41 -2.39 -0.02 -0.66 16 40 H 0.14 -0.66 8.05 -2.91 -0.02 -0.68 16 41 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 42 H 0.15 -1.05 8.06 -2.91 -0.02 -1.08 16 43 H 0.15 -1.16 6.73 -2.91 -0.02 -1.18 16 44 H 0.10 -0.85 7.62 -2.38 -0.02 -0.87 16 45 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 46 H 0.13 -0.06 8.06 -2.91 -0.02 -0.08 16 47 H 0.15 -0.10 8.06 -2.91 -0.02 -0.13 16 48 H 0.14 0.31 8.06 -2.91 -0.02 0.28 16 49 H 0.12 0.99 8.06 -2.91 -0.02 0.96 16 Total: 0.00 -26.70 430.08 0.24 -26.47 By element: Atomic # 1 Polarization: -20.31 SS G_CDS: -0.42 Total: -20.72 kcal Atomic # 6 Polarization: -3.46 SS G_CDS: 4.69 Total: 1.23 kcal Atomic # 7 Polarization: 5.94 SS G_CDS: -3.50 Total: 2.44 kcal Atomic # 8 Polarization: -8.37 SS G_CDS: -1.97 Total: -10.34 kcal Atomic # 14 Polarization: -0.39 SS G_CDS: 2.11 Total: 1.72 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -0.69 Total: -0.80 kcal Total: -26.70 0.24 -26.47 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.379 kcal (2) G-P(sol) polarization free energy of solvation -26.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.466 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.68 seconds