Wall clock time and date at job start Sun Mar 7 2021 01:43:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.36772 * 125.79710 * 2 1 4 4 C 1.47252 * 126.94811 * 359.97438 * 3 2 1 5 5 O 1.21627 * 119.99825 * 0.02562 * 4 3 2 6 6 N 1.34778 * 120.00535 * 179.97438 * 4 3 2 7 7 C 1.46502 * 120.00387 * 180.02562 * 6 4 3 8 8 H 1.09004 * 112.84455 * 334.66838 * 7 6 4 9 9 C 1.53774 * 113.61433 * 105.86439 * 7 6 4 10 10 C 1.54059 * 86.98378 * 89.16168 * 9 7 6 11 11 H 1.08992 * 113.61194 * 270.88423 * 10 9 7 12 12 C 1.50697 * 113.69291 * 139.98685 * 10 9 7 13 13 C 1.38197 * 119.99170 * 142.47021 * 12 10 9 14 14 C 1.38353 * 119.99086 * 180.02562 * 13 12 10 15 15 Br 1.89092 * 120.01162 * 180.02562 * 14 13 12 16 16 C 1.38308 * 119.97641 * 359.97438 * 14 13 12 17 17 C 1.38241 * 119.99320 * 0.02562 * 16 14 13 18 18 C 1.38225 * 120.00477 * 359.73117 * 17 16 14 19 19 C 1.53775 * 87.07557 * 25.43184 * 10 9 7 20 20 C 1.46690 * 106.11185 * 179.97438 * 3 2 1 21 21 C 1.34495 * 106.33510 * 359.97438 * 20 3 2 22 22 C 1.50691 * 125.57184 * 179.73682 * 21 20 3 23 23 O 1.42896 * 109.47597 * 64.99797 * 22 21 20 24 24 Si 1.86299 * 109.47031 * 185.00121 * 22 21 20 25 25 N 1.34657 * 125.80237 * 179.97438 * 2 1 3 26 26 H 1.08999 * 109.47155 * 90.00003 * 1 2 3 27 27 H 1.09005 * 109.47479 * 210.00069 * 1 2 3 28 28 H 1.09001 * 109.47646 * 329.99994 * 1 2 3 29 29 H 0.96998 * 119.99789 * 0.02562 * 6 4 3 30 30 H 1.08993 * 113.61668 * 203.66259 * 9 7 6 31 31 H 1.08999 * 113.61465 * 334.57283 * 9 7 6 32 32 H 1.07996 * 120.00633 * 359.97438 * 13 12 10 33 33 H 1.08002 * 120.00237 * 180.02562 * 16 14 13 34 34 H 1.07997 * 119.99935 * 179.97438 * 17 16 14 35 35 H 1.08003 * 119.98633 * 180.29489 * 18 17 16 36 36 H 1.09002 * 113.61674 * 220.01923 * 19 10 9 37 37 H 1.09002 * 113.69292 * 89.13037 * 19 10 9 38 38 H 1.07996 * 126.83547 * 179.97438 * 20 3 2 39 39 H 1.09003 * 109.47443 * 304.99584 * 22 21 20 40 40 H 0.96701 * 114.00011 * 60.00014 * 23 22 21 41 41 H 1.48501 * 110.00463 * 179.97438 * 24 22 21 42 42 H 1.48504 * 110.00061 * 301.31909 * 24 22 21 43 43 H 0.97001 * 124.85038 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0006 6 7 2.7849 3.5055 0.0001 7 6 2.3503 4.9045 0.0001 8 1 1.3579 5.0394 -0.4301 9 6 2.5348 5.6068 1.3556 10 6 3.9468 5.9899 0.8731 11 1 4.7065 5.2457 1.1117 12 6 4.3580 7.3888 1.2535 13 6 5.6644 7.6489 1.6215 14 6 6.0418 8.9332 1.9713 15 35 7.8294 9.2898 2.4743 16 6 5.1114 9.9563 1.9519 17 6 3.8047 9.6953 1.5836 18 6 3.4295 8.4129 1.2294 19 6 3.4021 5.8763 -0.5605 20 6 3.6881 0.6152 0.0006 21 6 3.6095 -0.7274 0.0015 22 6 4.7819 -1.6742 -0.0032 23 8 5.5156 -1.5300 1.2145 24 14 4.1651 -3.4257 -0.1529 25 7 2.2947 -1.0921 0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3634 -0.8900 0.5139 28 1 -0.3634 0.8900 0.5138 29 1 3.7310 3.2915 0.0005 30 1 1.8748 6.4626 1.4974 31 1 2.5325 4.9238 2.2051 32 1 6.3905 6.8496 1.6369 33 1 5.4056 10.9591 2.2244 34 1 3.0780 10.4940 1.5688 35 1 2.4097 8.2103 0.9372 36 1 4.0994 5.4108 -1.2570 37 1 2.9786 6.8050 -0.9430 38 1 4.5889 1.2110 0.0004 39 1 5.4312 -1.4443 -0.8480 40 1 4.9991 -1.7195 2.0097 41 1 5.3117 -4.3693 -0.1594 42 1 3.2533 -3.7413 0.9760 43 1 1.9734 -2.0074 0.0005 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14189268_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:43:29 Heat of formation + Delta-G solvation = 29.727661 kcal Electronic energy + Delta-G solvation = -26793.398784 eV Core-core repulsion = 22852.573107 eV Total energy + Delta-G solvation = -3940.825678 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.52796 -41.45841 -40.02054 -38.64663 -37.94799 -34.56137 -33.17261 -32.84311 -32.41723 -31.64186 -30.08954 -29.00675 -26.76076 -26.60114 -25.44013 -23.75783 -23.46039 -22.35279 -21.59528 -20.68885 -19.96516 -18.82090 -18.21644 -17.73398 -17.03547 -16.91629 -16.68006 -16.44961 -16.12982 -15.83447 -15.56079 -15.26277 -14.93880 -14.86136 -14.58188 -14.49081 -14.45424 -14.18725 -14.01599 -13.85479 -13.52607 -13.43378 -13.36055 -12.91266 -12.81876 -12.65690 -12.36051 -12.21800 -11.98102 -11.95701 -11.53985 -11.34149 -11.12356 -10.95666 -10.59284 -10.03782 -9.86683 -9.82917 -9.60108 -9.18251 -5.25819 0.08990 0.25763 0.68347 0.75476 0.97092 1.21770 1.27618 1.67888 1.95640 2.38659 2.54646 2.63156 3.17108 3.40762 3.55119 3.57163 3.68219 3.80079 3.81002 3.90775 4.03183 4.05407 4.10012 4.16842 4.23871 4.37320 4.38188 4.46387 4.61287 4.63726 4.67607 4.68379 4.72673 4.82679 4.88376 4.93267 4.99195 4.99600 5.10021 5.19970 5.25228 5.32658 5.49646 5.65827 5.70796 5.79058 5.83550 6.21305 6.29727 6.68578 7.46106 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.126 3.874 3 C -0.242 4.242 4 C 0.597 3.403 5 O -0.546 6.546 6 N -0.711 5.711 7 C 0.124 3.876 8 H 0.106 0.894 9 C -0.144 4.144 10 C -0.074 4.074 11 H 0.099 0.901 12 C -0.064 4.064 13 C -0.088 4.088 14 C -0.088 4.088 15 Br -0.051 7.051 16 C -0.096 4.096 17 C -0.110 4.110 18 C -0.102 4.102 19 C -0.135 4.135 20 C -0.127 4.127 21 C -0.027 4.027 22 C -0.040 4.040 23 O -0.522 6.522 24 Si 0.670 3.330 25 N -0.545 5.545 26 H 0.083 0.917 27 H 0.066 0.934 28 H 0.104 0.896 29 H 0.401 0.599 30 H 0.095 0.905 31 H 0.075 0.925 32 H 0.131 0.869 33 H 0.132 0.868 34 H 0.133 0.867 35 H 0.131 0.869 36 H 0.078 0.922 37 H 0.098 0.902 38 H 0.146 0.854 39 H 0.130 0.870 40 H 0.377 0.623 41 H -0.246 1.246 42 H -0.256 1.256 43 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.369 -2.662 -2.247 3.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.007 3.993 3 C -0.251 4.251 4 C 0.386 3.614 5 O -0.425 6.425 6 N -0.361 5.361 7 C 0.018 3.982 8 H 0.124 0.876 9 C -0.182 4.182 10 C -0.093 4.093 11 H 0.117 0.883 12 C -0.065 4.065 13 C -0.108 4.108 14 C -0.167 4.167 15 Br 0.035 6.965 16 C -0.116 4.116 17 C -0.129 4.129 18 C -0.120 4.120 19 C -0.173 4.173 20 C -0.152 4.152 21 C -0.135 4.135 22 C -0.152 4.152 23 O -0.328 6.328 24 Si 0.570 3.430 25 N -0.145 5.145 26 H 0.101 0.899 27 H 0.085 0.915 28 H 0.122 0.878 29 H 0.235 0.765 30 H 0.113 0.887 31 H 0.094 0.906 32 H 0.149 0.851 33 H 0.150 0.850 34 H 0.151 0.849 35 H 0.149 0.851 36 H 0.097 0.903 37 H 0.117 0.883 38 H 0.164 0.836 39 H 0.148 0.852 40 H 0.225 0.775 41 H -0.169 1.169 42 H -0.181 1.181 43 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -1.086 -3.125 -2.100 3.919 hybrid contribution 0.353 -0.140 1.109 1.172 sum -0.733 -3.265 -0.991 3.490 Atomic orbital electron populations 1.20661 0.86523 1.04548 1.03985 1.20410 0.93795 0.85250 0.99872 1.20074 0.93048 0.91952 1.20052 1.17298 0.85205 0.83966 0.74887 1.90755 1.16575 1.84319 1.50854 1.45430 1.09750 1.04881 1.76063 1.21776 0.99455 0.80241 0.96718 0.87642 1.23622 0.95515 1.00876 0.98227 1.21666 0.97631 0.93071 0.96902 0.88260 1.19708 0.92795 0.95351 0.98611 1.21030 0.96301 0.95120 0.98352 1.21838 0.91834 0.96523 1.06509 1.96777 1.12951 1.95804 1.90989 1.21165 0.92840 0.98599 0.98983 1.21199 0.95680 0.97190 0.98805 1.21185 0.99789 0.92398 0.98636 1.23423 0.98161 1.00001 0.95751 1.21794 0.95653 0.92585 1.05155 1.20467 0.84327 0.95635 1.13054 1.24379 0.93277 1.06984 0.90509 1.86657 1.40091 1.90801 1.15261 0.95541 0.83470 0.75089 0.88934 1.41740 1.05597 1.08517 1.58628 0.89857 0.91538 0.87783 0.76467 0.88688 0.90580 0.85085 0.85000 0.84938 0.85148 0.90342 0.88320 0.83588 0.85250 0.77487 1.16918 1.18085 0.74729 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.05 9.88 36.00 0.36 0.41 16 2 C 0.13 0.06 7.17 -81.88 -0.59 -0.52 16 3 C -0.24 -0.38 6.29 -103.35 -0.65 -1.03 16 4 C 0.60 1.62 7.81 -12.60 -0.10 1.52 16 5 O -0.55 -3.07 14.43 5.25 0.08 -2.99 16 6 N -0.71 -0.01 5.26 -54.15 -0.28 -0.29 16 7 C 0.12 -0.06 4.30 -67.12 -0.29 -0.35 16 8 H 0.11 0.11 7.50 -51.93 -0.39 -0.28 16 9 C -0.14 0.13 7.27 -25.78 -0.19 -0.05 16 10 C -0.07 0.12 3.87 -90.82 -0.35 -0.23 16 11 H 0.10 -0.21 8.09 -51.93 -0.42 -0.63 16 12 C -0.06 0.02 5.29 -104.63 -0.55 -0.54 16 13 C -0.09 -0.06 9.45 -39.55 -0.37 -0.43 16 14 C -0.09 -0.12 6.22 -39.51 -0.25 -0.37 16 15 Br -0.05 -0.08 33.70 -68.01 -2.29 -2.38 16 16 C -0.10 -0.06 9.79 -39.55 -0.39 -0.44 16 17 C -0.11 0.05 10.05 -39.59 -0.40 -0.35 16 18 C -0.10 0.07 8.60 -39.58 -0.34 -0.27 16 19 C -0.14 0.27 7.28 -25.92 -0.19 0.08 16 20 C -0.13 -0.01 10.45 -37.49 -0.39 -0.40 16 21 C -0.03 0.02 6.09 -81.87 -0.50 -0.47 16 22 C -0.04 0.08 2.98 36.00 0.11 0.18 16 23 O -0.52 0.14 12.88 -35.23 -0.45 -0.31 16 24 Si 0.67 -1.88 30.96 -169.99 -5.26 -7.15 16 25 N -0.55 0.80 5.41 -5.42 -0.03 0.77 16 26 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 28 H 0.10 0.16 6.47 -51.93 -0.34 -0.18 16 29 H 0.40 -0.76 7.83 -40.82 -0.32 -1.08 16 30 H 0.09 -0.14 6.34 -51.93 -0.33 -0.47 16 31 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 32 H 0.13 -0.04 8.05 -52.49 -0.42 -0.47 16 33 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 34 H 0.13 -0.31 8.06 -52.49 -0.42 -0.74 16 35 H 0.13 -0.30 6.68 -52.48 -0.35 -0.65 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 37 H 0.10 -0.22 7.72 -51.93 -0.40 -0.63 16 38 H 0.15 -0.21 7.70 -52.49 -0.40 -0.61 16 39 H 0.13 -0.35 7.96 -51.93 -0.41 -0.77 16 40 H 0.38 -1.06 8.70 45.56 0.40 -0.67 16 41 H -0.25 -0.18 7.11 56.52 0.40 0.23 16 42 H -0.26 0.29 7.11 56.52 0.40 0.69 16 43 H 0.41 -1.57 6.72 -40.82 -0.27 -1.84 16 LS Contribution 378.09 15.07 5.70 5.70 Total: 0.00 -7.56 378.09 -13.02 -20.58 By element: Atomic # 1 Polarization: -5.28 SS G_CDS: -5.40 Total: -10.68 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -5.08 Total: -3.26 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.31 Total: 0.48 kcal Atomic # 8 Polarization: -2.92 SS G_CDS: -0.38 Total: -3.30 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: -5.26 Total: -7.15 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.29 Total: -2.38 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -7.56 -13.02 -20.58 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.310 kcal (2) G-P(sol) polarization free energy of solvation -7.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.024 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.583 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds