Wall clock time and date at job start Sun Mar 7 2021 01:43:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.36772 * 125.79710 * 2 1 4 4 C 1.47252 * 126.94811 * 359.97438 * 3 2 1 5 5 O 1.21627 * 119.99825 * 0.02562 * 4 3 2 6 6 N 1.34778 * 120.00535 * 179.97438 * 4 3 2 7 7 C 1.46502 * 120.00387 * 180.02562 * 6 4 3 8 8 H 1.09004 * 112.84455 * 334.66838 * 7 6 4 9 9 C 1.53774 * 113.61433 * 105.86439 * 7 6 4 10 10 C 1.54059 * 86.98378 * 89.16168 * 9 7 6 11 11 H 1.08992 * 113.61194 * 270.88423 * 10 9 7 12 12 C 1.50697 * 113.69291 * 139.98685 * 10 9 7 13 13 C 1.38197 * 119.99170 * 142.47021 * 12 10 9 14 14 C 1.38353 * 119.99086 * 180.02562 * 13 12 10 15 15 Br 1.89092 * 120.01162 * 180.02562 * 14 13 12 16 16 C 1.38308 * 119.97641 * 359.97438 * 14 13 12 17 17 C 1.38241 * 119.99320 * 0.02562 * 16 14 13 18 18 C 1.38225 * 120.00477 * 359.73117 * 17 16 14 19 19 C 1.53775 * 87.07557 * 25.43184 * 10 9 7 20 20 C 1.46690 * 106.11185 * 179.97438 * 3 2 1 21 21 C 1.34495 * 106.33510 * 359.97438 * 20 3 2 22 22 C 1.50691 * 125.57184 * 179.73682 * 21 20 3 23 23 O 1.42896 * 109.47597 * 64.99797 * 22 21 20 24 24 Si 1.86299 * 109.47031 * 185.00121 * 22 21 20 25 25 N 1.34657 * 125.80237 * 179.97438 * 2 1 3 26 26 H 1.08999 * 109.47155 * 90.00003 * 1 2 3 27 27 H 1.09005 * 109.47479 * 210.00069 * 1 2 3 28 28 H 1.09001 * 109.47646 * 329.99994 * 1 2 3 29 29 H 0.96998 * 119.99789 * 0.02562 * 6 4 3 30 30 H 1.08993 * 113.61668 * 203.66259 * 9 7 6 31 31 H 1.08999 * 113.61465 * 334.57283 * 9 7 6 32 32 H 1.07996 * 120.00633 * 359.97438 * 13 12 10 33 33 H 1.08002 * 120.00237 * 180.02562 * 16 14 13 34 34 H 1.07997 * 119.99935 * 179.97438 * 17 16 14 35 35 H 1.08003 * 119.98633 * 180.29489 * 18 17 16 36 36 H 1.09002 * 113.61674 * 220.01923 * 19 10 9 37 37 H 1.09002 * 113.69292 * 89.13037 * 19 10 9 38 38 H 1.07996 * 126.83547 * 179.97438 * 20 3 2 39 39 H 1.09003 * 109.47443 * 304.99584 * 22 21 20 40 40 H 0.96701 * 114.00011 * 60.00014 * 23 22 21 41 41 H 1.48501 * 110.00463 * 179.97438 * 24 22 21 42 42 H 1.48504 * 110.00061 * 301.31909 * 24 22 21 43 43 H 0.97001 * 124.85038 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0006 6 7 2.7849 3.5055 0.0001 7 6 2.3503 4.9045 0.0001 8 1 1.3579 5.0394 -0.4301 9 6 2.5348 5.6068 1.3556 10 6 3.9468 5.9899 0.8731 11 1 4.7065 5.2457 1.1117 12 6 4.3580 7.3888 1.2535 13 6 5.6644 7.6489 1.6215 14 6 6.0418 8.9332 1.9713 15 35 7.8294 9.2898 2.4743 16 6 5.1114 9.9563 1.9519 17 6 3.8047 9.6953 1.5836 18 6 3.4295 8.4129 1.2294 19 6 3.4021 5.8763 -0.5605 20 6 3.6881 0.6152 0.0006 21 6 3.6095 -0.7274 0.0015 22 6 4.7819 -1.6742 -0.0032 23 8 5.5156 -1.5300 1.2145 24 14 4.1651 -3.4257 -0.1529 25 7 2.2947 -1.0921 0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3634 -0.8900 0.5139 28 1 -0.3634 0.8900 0.5138 29 1 3.7310 3.2915 0.0005 30 1 1.8748 6.4626 1.4974 31 1 2.5325 4.9238 2.2051 32 1 6.3905 6.8496 1.6369 33 1 5.4056 10.9591 2.2244 34 1 3.0780 10.4940 1.5688 35 1 2.4097 8.2103 0.9372 36 1 4.0994 5.4108 -1.2570 37 1 2.9786 6.8050 -0.9430 38 1 4.5889 1.2110 0.0004 39 1 5.4312 -1.4443 -0.8480 40 1 4.9991 -1.7195 2.0097 41 1 5.3117 -4.3693 -0.1594 42 1 3.2533 -3.7413 0.9760 43 1 1.9734 -2.0074 0.0005 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14189268_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:43:27 Heat of formation + Delta-G solvation = 33.733572 kcal Electronic energy + Delta-G solvation = -26793.225075 eV Core-core repulsion = 22852.573107 eV Total energy + Delta-G solvation = -3940.651968 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.057 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.49629 -41.42753 -40.07872 -38.68607 -37.87657 -34.63786 -33.18576 -32.80862 -32.39416 -31.61880 -30.10486 -28.92957 -26.67572 -26.57855 -25.39824 -23.74062 -23.43379 -22.34675 -21.53827 -20.74181 -19.92460 -18.75744 -18.18632 -17.71393 -17.00643 -16.89252 -16.61448 -16.45538 -16.10910 -15.86463 -15.52285 -15.21598 -14.92550 -14.86023 -14.54046 -14.49933 -14.43035 -14.19991 -13.95618 -13.82249 -13.43402 -13.36331 -13.35051 -12.87273 -12.75710 -12.61397 -12.32037 -12.14575 -11.99336 -11.89773 -11.52878 -11.35528 -11.13791 -11.01125 -10.61458 -10.11712 -9.84768 -9.80701 -9.60116 -9.16193 -5.05124 0.09972 0.28386 0.63654 0.70088 1.12951 1.27282 1.44893 1.81580 2.03782 2.39874 2.51591 2.58451 3.33827 3.47538 3.62045 3.66266 3.74361 3.87654 3.88802 3.97468 4.10333 4.11892 4.12861 4.23232 4.29917 4.42569 4.50903 4.54901 4.66549 4.69339 4.73663 4.77330 4.78852 4.88656 4.94926 5.00056 5.03784 5.05056 5.16207 5.22694 5.28730 5.37570 5.52946 5.67973 5.71293 5.84577 5.86214 6.39559 6.44685 6.65813 7.35656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.119 3.881 3 C -0.265 4.265 4 C 0.590 3.410 5 O -0.584 6.584 6 N -0.700 5.700 7 C 0.119 3.881 8 H 0.089 0.911 9 C -0.141 4.141 10 C -0.066 4.066 11 H 0.105 0.895 12 C -0.066 4.066 13 C -0.099 4.099 14 C -0.102 4.102 15 Br -0.062 7.062 16 C -0.108 4.108 17 C -0.113 4.113 18 C -0.104 4.104 19 C -0.123 4.123 20 C -0.136 4.136 21 C -0.021 4.021 22 C -0.047 4.047 23 O -0.541 6.541 24 Si 0.755 3.245 25 N -0.535 5.535 26 H 0.087 0.913 27 H 0.088 0.912 28 H 0.081 0.919 29 H 0.410 0.590 30 H 0.102 0.898 31 H 0.063 0.937 32 H 0.136 0.864 33 H 0.138 0.862 34 H 0.152 0.848 35 H 0.147 0.853 36 H 0.085 0.915 37 H 0.105 0.895 38 H 0.157 0.843 39 H 0.140 0.860 40 H 0.387 0.613 41 H -0.294 1.294 42 H -0.274 1.274 43 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.428 -3.096 -2.704 4.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.001 4.001 3 C -0.275 4.275 4 C 0.381 3.619 5 O -0.466 6.466 6 N -0.351 5.351 7 C 0.013 3.987 8 H 0.107 0.893 9 C -0.179 4.179 10 C -0.085 4.085 11 H 0.124 0.876 12 C -0.067 4.067 13 C -0.119 4.119 14 C -0.182 4.182 15 Br 0.024 6.976 16 C -0.128 4.128 17 C -0.131 4.131 18 C -0.123 4.123 19 C -0.161 4.161 20 C -0.160 4.160 21 C -0.130 4.130 22 C -0.157 4.157 23 O -0.348 6.348 24 Si 0.658 3.342 25 N -0.135 5.135 26 H 0.106 0.894 27 H 0.107 0.893 28 H 0.099 0.901 29 H 0.247 0.753 30 H 0.120 0.880 31 H 0.082 0.918 32 H 0.154 0.846 33 H 0.156 0.844 34 H 0.170 0.830 35 H 0.165 0.835 36 H 0.103 0.897 37 H 0.124 0.876 38 H 0.175 0.825 39 H 0.158 0.842 40 H 0.236 0.764 41 H -0.221 1.221 42 H -0.200 1.200 43 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -1.125 -3.544 -2.558 4.513 hybrid contribution 0.384 -0.030 1.269 1.327 sum -0.741 -3.574 -1.288 3.871 Atomic orbital electron populations 1.20619 0.86077 1.04466 1.04252 1.20565 0.94293 0.85594 0.99608 1.20174 0.94149 0.91691 1.21464 1.17587 0.84984 0.84896 0.74479 1.90727 1.18056 1.84933 1.52902 1.45367 1.09970 1.04765 1.74973 1.21808 0.99272 0.80277 0.97359 0.89303 1.23606 0.96206 1.00762 0.97351 1.21624 0.97255 0.92626 0.96966 0.87647 1.19842 0.92544 0.95966 0.98362 1.21170 0.96939 0.95092 0.98670 1.21955 0.91563 0.97164 1.07485 1.96751 1.13857 1.95859 1.91142 1.21352 0.93297 0.98811 0.99298 1.21471 0.95620 0.97921 0.98124 1.21445 1.00530 0.92237 0.98038 1.23370 0.97441 0.99690 0.95611 1.21970 0.95396 0.93190 1.05489 1.20604 0.84650 0.95547 1.12172 1.24629 0.93097 1.07558 0.90426 1.86632 1.41000 1.91043 1.16146 0.94549 0.80425 0.71956 0.87250 1.41708 1.05262 1.08788 1.57781 0.89406 0.89344 0.90062 0.75302 0.87999 0.91822 0.84617 0.84443 0.83036 0.83492 0.89653 0.87620 0.82526 0.84244 0.76403 1.22136 1.20047 0.73312 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.06 9.88 71.24 0.70 0.76 16 2 C 0.12 0.14 7.17 41.78 0.30 0.44 16 3 C -0.27 -0.98 6.29 -19.04 -0.12 -1.10 16 4 C 0.59 3.95 7.81 86.61 0.68 4.63 16 5 O -0.58 -7.72 14.43 -4.12 -0.06 -7.78 16 6 N -0.70 -0.48 5.26 -443.46 -2.33 -2.82 16 7 C 0.12 -0.05 4.30 45.51 0.20 0.15 16 8 H 0.09 0.30 7.50 -2.39 -0.02 0.28 16 9 C -0.14 0.23 7.27 31.21 0.23 0.46 16 10 C -0.07 0.24 3.87 -10.92 -0.04 0.20 16 11 H 0.11 -0.50 8.09 -2.39 -0.02 -0.52 16 12 C -0.07 0.06 5.29 -19.87 -0.11 -0.04 16 13 C -0.10 -0.13 9.45 22.29 0.21 0.08 16 14 C -0.10 -0.31 6.22 22.31 0.14 -0.17 16 15 Br -0.06 -0.24 33.70 -20.37 -0.69 -0.93 16 16 C -0.11 -0.13 9.79 22.29 0.22 0.09 16 17 C -0.11 0.17 10.05 22.27 0.22 0.40 16 18 C -0.10 0.22 8.60 22.27 0.19 0.41 16 19 C -0.12 0.55 7.28 31.12 0.23 0.78 16 20 C -0.14 0.02 10.45 23.62 0.25 0.26 16 21 C -0.02 0.05 6.09 40.98 0.25 0.30 16 22 C -0.05 0.22 2.98 71.23 0.21 0.43 16 23 O -0.54 0.59 12.88 -148.98 -1.92 -1.33 16 24 Si 0.75 -4.77 30.96 68.60 2.12 -2.65 16 25 N -0.54 1.95 5.41 -171.07 -0.93 1.02 16 26 H 0.09 -0.15 8.14 -2.39 -0.02 -0.17 16 27 H 0.09 -0.49 8.14 -2.38 -0.02 -0.51 16 28 H 0.08 0.38 6.47 -2.39 -0.02 0.37 16 29 H 0.41 -1.50 7.83 -92.71 -0.73 -2.23 16 30 H 0.10 -0.32 6.34 -2.39 -0.02 -0.34 16 31 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 32 H 0.14 -0.06 8.05 -2.91 -0.02 -0.08 16 33 H 0.14 -0.10 8.06 -2.91 -0.02 -0.13 16 34 H 0.15 -0.90 8.06 -2.91 -0.02 -0.92 16 35 H 0.15 -0.86 6.68 -2.91 -0.02 -0.88 16 36 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 37 H 0.11 -0.58 7.72 -2.39 -0.02 -0.60 16 38 H 0.16 -0.50 7.70 -2.91 -0.02 -0.53 16 39 H 0.14 -0.92 7.96 -2.39 -0.02 -0.94 16 40 H 0.39 -2.36 8.70 -74.06 -0.64 -3.00 16 41 H -0.29 -0.60 7.11 99.48 0.71 0.10 16 42 H -0.27 0.90 7.11 99.48 0.71 1.61 16 43 H 0.43 -3.76 6.72 -92.71 -0.62 -4.38 16 Total: 0.00 -18.79 378.09 -0.92 -19.71 By element: Atomic # 1 Polarization: -12.41 SS G_CDS: -0.87 Total: -13.29 kcal Atomic # 6 Polarization: 4.30 SS G_CDS: 3.75 Total: 8.06 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -3.26 Total: -1.79 kcal Atomic # 8 Polarization: -7.13 SS G_CDS: -1.98 Total: -9.11 kcal Atomic # 14 Polarization: -4.77 SS G_CDS: 2.12 Total: -2.65 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.69 Total: -0.93 kcal Total: -18.79 -0.92 -19.71 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14189268_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.439 kcal (2) G-P(sol) polarization free energy of solvation -18.786 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.653 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.705 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.734 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds