Wall clock time and date at job start Sun Mar 7 2021 04:57:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.42900 * 109.47184 * 2 1 4 4 C 1.35905 * 116.99829 * 276.09126 * 3 2 1 5 5 C 1.38732 * 120.05647 * 357.22453 * 4 3 2 6 6 C 1.38142 * 119.93894 * 180.02562 * 5 4 3 7 7 C 1.38266 * 120.05912 * 0.02562 * 6 5 4 8 8 C 1.50702 * 119.94300 * 179.97438 * 7 6 5 9 9 O 1.42903 * 109.47112 * 300.00070 * 8 7 6 10 10 Si 1.86301 * 109.46768 * 180.02562 * 8 7 6 11 11 C 1.38263 * 120.11202 * 0.25315 * 7 6 5 12 12 C 1.38145 * 120.05477 * 359.44614 * 11 7 6 13 13 C 1.50695 * 109.47094 * 120.00474 * 2 1 3 14 14 O 1.21286 * 119.99418 * 244.99504 * 13 2 1 15 15 N 1.34776 * 120.00603 * 64.99858 * 13 2 1 16 16 C 1.46498 * 120.00422 * 185.17486 * 15 13 2 17 17 C 1.50692 * 112.85193 * 65.88666 * 16 15 13 18 18 N 1.34771 * 120.00093 * 35.72346 * 17 16 15 19 19 O 1.21288 * 119.99981 * 215.72901 * 17 16 15 20 20 C 1.53788 * 113.61070 * 294.68967 * 16 15 13 21 21 C 1.53784 * 87.08095 * 270.88316 * 20 16 15 22 22 H 1.08996 * 113.61302 * 219.93503 * 21 20 16 23 23 O 1.42906 * 113.61408 * 89.11676 * 21 20 16 24 24 C 1.53778 * 87.08207 * 334.56840 * 21 20 16 25 25 H 1.08991 * 109.46815 * 299.99617 * 1 2 3 26 26 H 1.09000 * 109.46827 * 60.00229 * 1 2 3 27 27 H 1.09003 * 109.47044 * 179.97438 * 1 2 3 28 28 H 1.09008 * 109.46687 * 240.00137 * 2 1 3 29 29 H 1.08000 * 120.02889 * 359.97438 * 5 4 3 30 30 H 1.08007 * 119.97023 * 179.97438 * 6 5 4 31 31 H 1.08989 * 109.47101 * 60.00041 * 8 7 6 32 32 H 0.96705 * 114.00107 * 180.02562 * 9 8 7 33 33 H 1.48489 * 110.00378 * 60.00074 * 10 8 7 34 34 H 1.48503 * 109.99664 * 181.32102 * 10 8 7 35 35 H 1.07998 * 119.97108 * 179.70611 * 11 7 6 36 36 H 1.08002 * 120.03036 * 180.25746 * 12 11 7 37 37 H 0.97010 * 119.99477 * 5.16966 * 15 13 2 38 38 H 0.96996 * 120.00152 * 4.75572 * 18 17 16 39 39 H 0.97004 * 120.00406 * 184.75453 * 18 17 16 40 40 H 1.08999 * 113.61108 * 25.43262 * 20 16 15 41 41 H 1.08999 * 113.60982 * 156.25063 * 20 16 15 42 42 H 0.96700 * 114.00100 * 179.97438 * 23 21 20 43 43 H 1.09000 * 113.61940 * 270.88470 * 24 21 20 44 44 H 1.09005 * 113.61144 * 139.98020 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.0909 1.9718 -1.2041 5 6 1.7779 1.2835 -2.3673 6 6 1.8652 1.9205 -3.5900 7 6 2.2645 3.2426 -3.6551 8 6 2.3593 3.9348 -4.9904 9 8 3.3009 3.2479 -5.8173 10 14 2.9210 5.6934 -4.7397 11 6 2.5825 3.9291 -2.4978 12 6 2.4909 3.2985 -1.2721 13 6 2.0324 -0.7105 1.2304 14 8 2.6531 -0.0979 2.0733 15 7 1.7920 -2.0265 1.3941 16 6 2.1800 -2.6926 2.6398 17 6 1.4043 -2.1990 3.8337 18 7 0.1070 -1.8587 3.7006 19 8 1.9474 -2.1077 4.9143 20 6 3.7003 -2.7354 2.8677 21 6 3.6995 -4.0648 2.0946 22 1 4.3661 -4.8163 2.5177 23 8 3.8656 -3.9068 0.6841 24 6 2.2329 -4.2255 2.5281 25 1 -0.3632 0.5137 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 1.8933 -0.5139 -0.8901 29 1 1.4671 0.2504 -2.3170 30 1 1.6220 1.3851 -4.4959 31 1 1.3817 3.9304 -5.4721 32 1 3.4135 3.6395 -6.6942 33 1 4.2530 5.7126 -4.0838 34 1 2.9879 6.3963 -6.0461 35 1 2.8987 4.9603 -2.5518 36 1 2.7354 3.8363 -0.3680 37 1 1.3619 -2.5326 0.6870 38 1 -0.3461 -1.9963 2.8541 39 1 -0.3736 -1.4762 4.4514 40 1 4.2404 -1.9358 2.3608 41 1 3.9819 -2.8384 3.9157 42 1 3.8663 -4.7395 0.1924 43 1 2.1133 -4.7372 3.4830 44 1 1.5884 -4.6289 1.7469 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_10157680.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:57:27 Heat of formation + Delta-G solvation = -127.008907 kcal Electronic energy + Delta-G solvation = -29862.546533 eV Core-core repulsion = 25555.147955 eV Total energy + Delta-G solvation = -4307.398578 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.42022 -41.50073 -40.15451 -39.29798 -38.83842 -37.35125 -36.18071 -34.86855 -34.33649 -32.78839 -32.09857 -31.40481 -27.31997 -26.99617 -26.59944 -25.32737 -24.14159 -22.65587 -22.24936 -21.47997 -20.47678 -19.47123 -19.16000 -18.81013 -18.48525 -17.99658 -17.84791 -16.98685 -16.89996 -16.78328 -16.66958 -16.08009 -15.94496 -15.85027 -15.53800 -15.26676 -15.13383 -14.82010 -14.38602 -14.34657 -13.92992 -13.88942 -13.84583 -13.68209 -13.41089 -13.30512 -13.23689 -12.90450 -12.45560 -12.41678 -12.07858 -11.99980 -11.91876 -11.69427 -11.38826 -11.05718 -10.90754 -10.78676 -10.47816 -10.15764 -10.04715 -9.20599 -4.93152 0.23935 0.32725 1.20481 1.31457 1.32675 1.51085 1.58835 1.95353 2.40123 2.44445 2.60959 3.00976 3.24803 3.34180 3.41123 3.45210 3.61676 3.65553 3.80425 3.81691 3.88921 3.93938 3.94838 4.25120 4.31559 4.34549 4.50760 4.58732 4.60109 4.67260 4.69513 4.70147 4.77292 4.82342 4.89823 4.98506 5.11250 5.17929 5.25304 5.27828 5.49332 5.66170 5.73916 6.19553 6.30630 6.40341 6.61177 6.91401 7.02967 7.17562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.065 3.935 3 O -0.313 6.313 4 C 0.121 3.879 5 C -0.207 4.207 6 C -0.055 4.055 7 C -0.124 4.124 8 C -0.074 4.074 9 O -0.558 6.558 10 Si 0.751 3.249 11 C -0.079 4.079 12 C -0.162 4.162 13 C 0.519 3.481 14 O -0.559 6.559 15 N -0.673 5.673 16 C 0.131 3.869 17 C 0.522 3.478 18 N -0.832 5.832 19 O -0.584 6.584 20 C -0.136 4.136 21 C 0.094 3.906 22 H 0.095 0.905 23 O -0.559 6.559 24 C -0.134 4.134 25 H 0.062 0.938 26 H 0.086 0.914 27 H 0.117 0.883 28 H 0.125 0.875 29 H 0.158 0.842 30 H 0.143 0.857 31 H 0.100 0.900 32 H 0.395 0.605 33 H -0.305 1.305 34 H -0.285 1.285 35 H 0.144 0.856 36 H 0.134 0.866 37 H 0.428 0.572 38 H 0.415 0.585 39 H 0.406 0.594 40 H 0.056 0.944 41 H 0.100 0.900 42 H 0.403 0.597 43 H 0.114 0.886 44 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.914 -6.432 -7.442 13.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.005 3.995 3 O -0.227 6.227 4 C 0.076 3.924 5 C -0.225 4.225 6 C -0.073 4.073 7 C -0.125 4.125 8 C -0.183 4.183 9 O -0.368 6.368 10 Si 0.657 3.343 11 C -0.096 4.096 12 C -0.180 4.180 13 C 0.305 3.695 14 O -0.435 6.435 15 N -0.330 5.330 16 C 0.041 3.959 17 C 0.305 3.695 18 N -0.395 5.395 19 O -0.462 6.462 20 C -0.175 4.175 21 C 0.035 3.965 22 H 0.113 0.887 23 O -0.368 6.368 24 C -0.172 4.172 25 H 0.081 0.919 26 H 0.105 0.895 27 H 0.136 0.864 28 H 0.143 0.857 29 H 0.175 0.825 30 H 0.160 0.840 31 H 0.118 0.882 32 H 0.245 0.755 33 H -0.233 1.233 34 H -0.212 1.212 35 H 0.162 0.838 36 H 0.152 0.848 37 H 0.268 0.732 38 H 0.246 0.754 39 H 0.237 0.763 40 H 0.075 0.925 41 H 0.119 0.881 42 H 0.254 0.746 43 H 0.132 0.868 44 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -7.305 -5.072 -5.548 10.482 hybrid contribution 0.239 -0.734 -1.228 1.450 sum -7.067 -5.806 -6.776 11.383 Atomic orbital electron populations 1.22377 0.89672 1.06176 1.04600 1.22418 0.97620 0.82157 0.97270 1.86195 1.81279 1.27059 1.28145 1.19224 0.96250 0.92625 0.84339 1.21499 1.07667 1.01862 0.91464 1.21005 0.95198 0.93468 0.97669 1.19422 1.03740 0.95811 0.93490 1.24816 0.96515 1.06124 0.90840 1.86544 1.63713 1.56010 1.30561 0.94301 0.83299 0.75195 0.81470 1.20913 0.97637 0.99937 0.91159 1.20537 1.05527 0.92883 0.99087 1.20644 0.78779 0.82539 0.87578 1.90809 1.40044 1.67172 1.45494 1.45122 1.62405 1.07759 1.17752 1.21422 0.95135 0.96598 0.82783 1.20904 0.83003 0.75904 0.89683 1.43666 1.11419 1.65378 1.19045 1.90743 1.70529 1.55110 1.29846 1.23340 0.93875 0.98801 1.01466 1.22540 0.95689 0.95967 0.82349 0.88745 1.86473 1.95619 1.37625 1.17111 1.23898 0.99068 0.88690 1.05519 0.91882 0.89498 0.86444 0.85749 0.82460 0.83950 0.88194 0.75493 1.23325 1.21178 0.83848 0.84831 0.73180 0.75353 0.76252 0.92530 0.88138 0.74623 0.86765 0.85496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.39 9.22 71.98 0.66 2.05 16 2 C 0.06 -0.07 2.65 29.85 0.08 0.01 16 3 O -0.31 -2.41 9.34 -73.49 -0.69 -3.10 16 4 C 0.12 0.65 6.56 22.51 0.15 0.79 16 5 C -0.21 -0.08 8.37 22.37 0.19 0.11 16 6 C -0.06 -0.06 9.60 22.25 0.21 0.16 16 7 C -0.12 -0.31 5.42 -19.85 -0.11 -0.42 16 8 C -0.07 0.06 2.81 71.24 0.20 0.26 16 9 O -0.56 -0.97 12.74 -148.98 -1.90 -2.87 16 10 Si 0.75 -0.72 29.78 68.60 2.04 1.32 16 11 C -0.08 -0.26 8.66 22.25 0.19 -0.07 16 12 C -0.16 -0.94 9.99 22.37 0.22 -0.72 16 13 C 0.52 2.13 6.73 87.66 0.59 2.72 16 14 O -0.56 -9.40 15.05 15.94 0.24 -9.16 16 15 N -0.67 2.83 4.14 -423.93 -1.75 1.08 16 16 C 0.13 0.03 0.94 3.38 0.00 0.04 16 17 C 0.52 3.14 6.75 87.66 0.59 3.73 16 18 N -0.83 1.88 8.79 -173.54 -1.52 0.36 16 19 O -0.58 -9.66 16.75 -3.05 -0.05 -9.71 16 20 C -0.14 -0.79 6.63 31.12 0.21 -0.58 16 21 C 0.09 -0.38 5.28 31.12 0.16 -0.21 16 22 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 23 O -0.56 2.87 13.09 -148.98 -1.95 0.92 16 24 C -0.13 1.04 7.19 31.12 0.22 1.26 16 25 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 26 H 0.09 -0.75 7.38 -2.39 -0.02 -0.77 16 27 H 0.12 -1.90 8.11 -2.39 -0.02 -1.92 16 28 H 0.13 -0.78 5.97 -2.38 -0.01 -0.79 16 29 H 0.16 -0.97 5.69 -2.91 -0.02 -0.99 16 30 H 0.14 -0.32 8.06 -2.91 -0.02 -0.34 16 31 H 0.10 -0.56 7.96 -2.39 -0.02 -0.58 16 32 H 0.39 -2.46 8.74 -74.05 -0.65 -3.11 16 33 H -0.31 -2.28 7.11 99.48 0.71 -1.57 16 34 H -0.28 -0.79 7.11 99.48 0.71 -0.08 16 35 H 0.14 -0.03 4.87 -2.91 -0.01 -0.05 16 36 H 0.13 0.72 8.06 -2.91 -0.02 0.69 16 37 H 0.43 -5.59 8.63 -92.70 -0.80 -6.39 16 38 H 0.42 -4.03 8.46 -92.71 -0.78 -4.81 16 39 H 0.41 -1.03 8.93 -92.71 -0.83 -1.85 16 40 H 0.06 0.73 7.19 -2.39 -0.02 0.71 16 41 H 0.10 0.89 7.34 -2.39 -0.02 0.87 16 42 H 0.40 -5.87 9.12 -74.06 -0.68 -6.54 16 43 H 0.11 -0.85 8.10 -2.39 -0.02 -0.87 16 44 H 0.13 -1.89 8.09 -2.38 -0.02 -1.91 16 Total: 0.00 -38.66 367.69 -4.58 -43.24 By element: Atomic # 1 Polarization: -28.64 SS G_CDS: -2.58 Total: -31.23 kcal Atomic # 6 Polarization: 5.56 SS G_CDS: 3.58 Total: 9.14 kcal Atomic # 7 Polarization: 4.72 SS G_CDS: -3.28 Total: 1.44 kcal Atomic # 8 Polarization: -19.57 SS G_CDS: -4.35 Total: -23.92 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: 2.04 Total: 1.32 kcal Total: -38.66 -4.58 -43.24 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_10157680.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.765 kcal (2) G-P(sol) polarization free energy of solvation -38.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds