Wall clock time and date at job start Sun Mar 7 2021 04:57:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34783 * 1 3 3 O 1.21280 * 119.99853 * 2 1 4 4 C 1.50699 * 119.99730 * 179.97438 * 2 1 3 5 5 N 1.46495 * 112.85045 * 312.95905 * 4 2 1 6 6 C 1.34776 * 120.00432 * 297.69456 * 5 4 2 7 7 O 1.21697 * 119.99547 * 354.99792 * 6 5 4 8 8 C 1.46679 * 120.00134 * 174.99920 * 6 5 4 9 9 C 1.37871 * 126.22955 * 179.71573 * 8 6 5 10 10 C 1.39841 * 107.08118 * 179.84671 * 9 8 6 11 11 C 1.50700 * 126.06616 * 180.13691 * 10 9 8 12 12 O 1.42891 * 109.47217 * 300.30470 * 11 10 9 13 13 Si 1.86304 * 109.46932 * 180.30205 * 11 10 9 14 14 C 1.35447 * 107.86316 * 0.41669 * 10 9 8 15 15 N 1.35534 * 108.87838 * 359.74039 * 14 10 9 16 16 C 1.53786 * 113.61224 * 181.65090 * 4 2 1 17 17 C 1.53773 * 87.08046 * 220.02177 * 16 4 2 18 18 H 1.08999 * 113.68999 * 139.99305 * 17 16 4 19 19 O 1.42905 * 113.61692 * 270.88258 * 17 16 4 20 20 C 1.53783 * 87.08516 * 25.43392 * 17 16 4 21 21 H 0.96998 * 120.00235 * 185.02625 * 1 2 3 22 22 H 0.97006 * 119.99311 * 5.01974 * 1 2 3 23 23 H 0.97001 * 119.99472 * 117.69527 * 5 4 2 24 24 H 1.07998 * 126.46188 * 359.96477 * 9 8 6 25 25 H 1.08998 * 109.46921 * 60.30595 * 11 10 9 26 26 H 0.96701 * 114.00032 * 299.99855 * 12 11 10 27 27 H 1.48503 * 109.99830 * 58.68582 * 13 11 10 28 28 H 1.48497 * 109.99724 * 179.97438 * 13 11 10 29 29 H 1.08006 * 125.56376 * 179.77542 * 14 10 9 30 30 H 0.96997 * 125.68379 * 179.97438 * 15 14 10 31 31 H 1.09002 * 113.61368 * 334.57216 * 16 4 2 32 32 H 1.08997 * 113.60885 * 105.47496 * 16 4 2 33 33 H 0.96688 * 113.99999 * 277.50089 * 19 17 16 34 34 H 1.08994 * 113.61600 * 220.02021 * 20 17 16 35 35 H 1.09001 * 113.61122 * 89.11403 * 20 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.5889 -2.2573 0.9890 6 6 1.6340 -1.9557 2.3018 7 8 2.1818 -0.9344 2.6730 8 6 1.0228 -2.8585 3.2831 9 6 0.9985 -2.6801 4.6500 10 6 0.3149 -3.7718 5.1946 11 6 0.0393 -4.0059 6.6576 12 8 1.2760 -4.0806 7.3693 13 14 -0.8945 -5.6045 6.8655 14 6 -0.0500 -4.5845 4.1743 15 7 0.3741 -4.0409 3.0075 16 6 3.6291 -1.1344 0.0411 17 6 3.7069 -2.2980 -0.9612 18 1 4.4578 -2.1569 -1.7385 19 8 3.7844 -3.5833 -0.3414 20 6 2.2850 -1.9109 -1.4009 21 1 -0.4850 -0.8368 0.0736 22 1 -0.4849 0.8369 -0.0735 23 1 1.2173 -3.1049 0.6985 24 1 1.4252 -1.8524 5.1970 25 1 -0.5573 -3.1829 7.0511 26 1 1.8589 -4.7923 7.0714 27 1 -0.1055 -6.7303 6.3040 28 1 -1.1720 -5.8472 8.3040 29 1 -0.5912 -5.5138 4.2742 30 1 0.2429 -4.4218 2.1251 31 1 3.9731 -0.1836 -0.3660 32 1 4.0684 -1.3641 1.0118 33 1 4.6762 -3.8323 -0.0627 34 1 1.6394 -2.7675 -1.5943 35 1 2.2617 -1.1724 -2.2023 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_10543058.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:57:31 Heat of formation + Delta-G solvation = -80.173509 kcal Electronic energy + Delta-G solvation = -22725.084762 eV Core-core repulsion = 19112.274779 eV Total energy + Delta-G solvation = -3612.809983 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.109 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.67117 -41.95479 -39.79378 -39.17651 -37.81114 -36.20070 -34.77948 -34.11259 -32.46549 -30.71607 -27.35466 -27.05166 -26.26675 -24.26550 -22.37434 -21.31392 -20.91854 -20.44875 -20.02901 -19.11739 -18.11500 -17.93839 -17.61910 -17.00504 -16.81288 -16.46396 -15.97666 -15.87568 -15.77525 -15.44386 -15.19106 -14.72022 -14.55845 -14.44528 -13.85756 -13.80732 -13.56529 -13.44466 -13.26280 -12.62460 -12.45027 -11.82219 -11.75154 -11.51051 -11.42326 -10.93577 -10.80452 -10.52144 -10.25057 -9.94906 -9.30938 -4.84106 0.32000 1.26357 1.38254 1.56793 1.69591 1.82877 2.08881 2.11941 2.16084 2.44857 2.95636 3.20497 3.42779 3.54000 3.64076 3.72225 3.93100 3.98554 4.18040 4.29326 4.37988 4.57165 4.65792 4.72490 4.73900 4.81959 4.87227 4.90248 5.02001 5.23264 5.56247 5.70005 5.74665 6.22917 6.32544 6.50149 6.62459 6.75067 6.98257 7.16752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.833 5.833 2 C 0.521 3.479 3 O -0.580 6.580 4 C 0.131 3.869 5 N -0.678 5.678 6 C 0.590 3.410 7 O -0.566 6.566 8 C -0.066 4.066 9 C -0.105 4.105 10 C -0.225 4.225 11 C -0.063 4.063 12 O -0.559 6.559 13 Si 0.793 3.207 14 C 0.066 3.934 15 N -0.510 5.510 16 C -0.165 4.165 17 C 0.093 3.907 18 H 0.098 0.902 19 O -0.556 6.556 20 C -0.105 4.105 21 H 0.415 0.585 22 H 0.407 0.593 23 H 0.420 0.580 24 H 0.118 0.882 25 H 0.107 0.893 26 H 0.384 0.616 27 H -0.268 1.268 28 H -0.315 1.315 29 H 0.218 0.782 30 H 0.439 0.561 31 H 0.094 0.906 32 H 0.061 0.939 33 H 0.398 0.602 34 H 0.119 0.881 35 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.055 -9.874 -7.249 13.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.396 5.396 2 C 0.304 3.696 3 O -0.458 6.458 4 C 0.040 3.960 5 N -0.333 5.333 6 C 0.379 3.621 7 O -0.444 6.444 8 C -0.179 4.179 9 C -0.132 4.132 10 C -0.231 4.231 11 C -0.171 4.171 12 O -0.367 6.367 13 Si 0.697 3.303 14 C -0.073 4.073 15 N -0.108 5.108 16 C -0.205 4.205 17 C 0.034 3.966 18 H 0.115 0.885 19 O -0.364 6.364 20 C -0.142 4.142 21 H 0.245 0.755 22 H 0.238 0.762 23 H 0.259 0.741 24 H 0.136 0.864 25 H 0.125 0.875 26 H 0.233 0.767 27 H -0.194 1.194 28 H -0.244 1.244 29 H 0.234 0.766 30 H 0.280 0.720 31 H 0.113 0.887 32 H 0.079 0.921 33 H 0.249 0.751 34 H 0.137 0.863 35 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -6.025 -8.874 -6.686 12.639 hybrid contribution 1.476 0.137 0.345 1.522 sum -4.549 -8.737 -6.341 11.714 Atomic orbital electron populations 1.43680 1.06239 1.14099 1.75560 1.20886 0.83584 0.90860 0.74244 1.90742 1.69408 1.34640 1.51059 1.21461 0.94605 0.87034 0.92911 1.45142 1.63514 1.21004 1.03670 1.17340 0.78359 0.84422 0.81985 1.90928 1.45317 1.28041 1.80140 1.19924 1.11305 0.92581 0.94043 1.21189 1.00858 0.99367 0.91798 1.19869 1.09070 0.97996 0.96159 1.24806 0.90375 1.13889 0.88052 1.86568 1.30485 1.57412 1.62203 0.94334 0.84524 0.71855 0.79571 1.22386 1.01312 1.00210 0.83369 1.41823 1.42274 1.16539 1.10130 1.23924 0.93561 1.01416 1.01563 1.22607 0.98286 0.82156 0.93565 0.88459 1.86313 1.36581 1.32834 1.80701 1.23359 0.96862 1.02014 0.91982 0.75467 0.76178 0.74138 0.86382 0.87502 0.76698 1.19392 1.24406 0.76608 0.71973 0.88716 0.92066 0.75132 0.86257 0.85747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 1.42 8.85 -173.53 -1.54 -0.12 16 2 C 0.52 3.40 6.48 87.66 0.57 3.97 16 3 O -0.58 -10.06 16.73 -3.03 -0.05 -10.11 16 4 C 0.13 0.06 0.90 3.39 0.00 0.07 16 5 N -0.68 1.99 4.46 -427.84 -1.91 0.08 16 6 C 0.59 3.30 7.34 86.45 0.63 3.93 16 7 O -0.57 -9.72 15.59 -4.34 -0.07 -9.79 16 8 C -0.07 -0.11 7.05 40.35 0.28 0.17 16 9 C -0.10 -0.64 10.59 22.57 0.24 -0.40 16 10 C -0.22 0.08 5.44 -20.12 -0.11 -0.03 16 11 C -0.06 -0.01 3.02 71.24 0.22 0.21 16 12 O -0.56 -2.90 12.88 -148.98 -1.92 -4.82 16 13 Si 0.79 -4.01 30.59 68.60 2.10 -1.91 16 14 C 0.07 -0.52 10.45 83.48 0.87 0.35 16 15 N -0.51 4.27 5.99 -183.62 -1.10 3.17 16 16 C -0.17 -0.63 6.62 31.12 0.21 -0.43 16 17 C 0.09 -0.44 5.28 31.12 0.16 -0.28 16 18 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 19 O -0.56 3.17 13.09 -148.98 -1.95 1.22 16 20 C -0.10 0.72 7.18 31.12 0.22 0.95 16 21 H 0.41 -3.53 8.65 -92.71 -0.80 -4.33 16 22 H 0.41 -0.97 8.93 -92.70 -0.83 -1.79 16 23 H 0.42 -4.46 7.78 -92.71 -0.72 -5.18 16 24 H 0.12 1.37 8.06 -2.91 -0.02 1.35 16 25 H 0.11 0.08 7.96 -2.39 -0.02 0.06 16 26 H 0.38 -0.44 8.70 -74.06 -0.64 -1.08 16 27 H -0.27 0.95 7.11 99.48 0.71 1.65 16 28 H -0.32 -1.46 7.11 99.48 0.71 -0.75 16 29 H 0.22 -3.48 6.19 -2.91 -0.02 -3.50 16 30 H 0.44 -7.17 8.20 -92.71 -0.76 -7.93 16 31 H 0.09 0.68 7.41 -2.39 -0.02 0.66 16 32 H 0.06 0.55 7.52 -2.39 -0.02 0.54 16 33 H 0.40 -4.24 9.12 -74.07 -0.68 -4.92 16 34 H 0.12 -1.43 8.09 -2.39 -0.02 -1.45 16 35 H 0.12 -0.99 8.09 -2.39 -0.02 -1.01 16 Total: 0.00 -35.92 305.59 -6.31 -42.22 By element: Atomic # 1 Polarization: -25.27 SS G_CDS: -3.17 Total: -28.45 kcal Atomic # 6 Polarization: 5.21 SS G_CDS: 3.30 Total: 8.51 kcal Atomic # 7 Polarization: 7.67 SS G_CDS: -4.55 Total: 3.13 kcal Atomic # 8 Polarization: -19.51 SS G_CDS: -3.99 Total: -23.50 kcal Atomic # 14 Polarization: -4.01 SS G_CDS: 2.10 Total: -1.91 kcal Total: -35.92 -6.31 -42.22 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_10543058.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.953 kcal (2) G-P(sol) polarization free energy of solvation -35.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.868 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.305 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.220 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.174 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds