Wall clock time and date at job start Sun Mar 7 2021 04:57:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.37649 * 125.67975 * 2 1 4 4 C 1.46681 * 126.23286 * 359.97438 * 3 2 1 5 5 O 1.21702 * 119.99929 * 173.66452 * 4 3 2 6 6 N 1.34780 * 120.00135 * 353.67303 * 4 3 2 7 7 C 1.46497 * 119.99847 * 184.23462 * 6 4 3 8 8 C 1.50695 * 112.90843 * 285.87002 * 7 6 4 9 9 N 1.34778 * 120.00201 * 336.69098 * 8 7 6 10 10 O 1.21279 * 119.99963 * 156.68925 * 8 7 6 11 11 C 1.53963 * 113.61102 * 154.54706 * 7 6 4 12 12 C 1.53780 * 87.11003 * 270.84177 * 11 7 6 13 13 H 1.09001 * 113.69288 * 220.08364 * 12 11 7 14 14 O 1.42906 * 113.61720 * 89.18580 * 12 11 7 15 15 C 1.53778 * 113.61300 * 57.12533 * 7 6 4 16 16 C 1.37873 * 107.53546 * 180.24128 * 3 2 1 17 17 C 1.39837 * 107.08160 * 359.58475 * 16 3 2 18 18 C 1.35452 * 107.86665 * 0.41853 * 17 16 3 19 19 C 1.50698 * 125.56723 * 179.71777 * 18 17 16 20 20 O 1.42894 * 109.47401 * 150.02289 * 19 18 17 21 21 Si 1.86306 * 109.46840 * 30.02282 * 19 18 17 22 22 H 1.09008 * 109.46955 * 83.11093 * 1 2 3 23 23 H 1.08998 * 109.47306 * 203.11501 * 1 2 3 24 24 H 1.08997 * 109.46977 * 323.12130 * 1 2 3 25 25 H 0.97003 * 119.99549 * 4.23225 * 6 4 3 26 26 H 0.97001 * 119.99562 * 5.03560 * 9 8 7 27 27 H 0.97000 * 120.00262 * 185.03318 * 9 8 7 28 28 H 1.08992 * 113.53471 * 156.28931 * 11 7 6 29 29 H 1.08996 * 113.66120 * 25.40857 * 11 7 6 30 30 H 0.96700 * 113.99719 * 82.49875 * 14 12 11 31 31 H 1.08996 * 113.61677 * 334.56448 * 15 7 6 32 32 H 1.09005 * 113.61148 * 203.74673 * 15 7 6 33 33 H 1.07995 * 126.46028 * 179.73718 * 16 3 2 34 34 H 1.08002 * 126.06684 * 180.15171 * 17 16 3 35 35 H 1.09003 * 109.47072 * 270.02612 * 19 18 17 36 36 H 0.96698 * 114.00564 * 180.02562 * 20 19 18 37 37 H 1.48494 * 109.99742 * 60.00212 * 21 19 18 38 38 H 1.48498 * 109.99914 * 181.31702 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8125 2.5124 -0.0005 5 8 2.6193 3.4161 0.1158 6 7 0.5005 2.7929 -0.1297 7 6 0.0549 4.1853 -0.2235 8 6 0.1166 4.9110 1.0957 9 7 0.0840 4.2155 2.2497 10 8 0.1955 6.1210 1.1190 11 6 -1.2863 4.3552 -0.9603 12 6 -0.4694 4.4748 -2.2577 13 1 -0.8464 5.2328 -2.9443 14 8 -0.2228 3.2205 -2.8967 15 6 0.6992 4.9613 -1.3843 16 6 3.5780 0.6888 -0.0055 17 6 3.5522 -0.7094 0.0008 18 6 2.2555 -1.1010 0.0005 19 6 1.7708 -2.5279 0.0002 20 8 0.5125 -2.6037 0.6730 21 14 3.0109 -3.6051 0.8791 22 1 -0.3633 0.1233 -1.0203 23 1 -0.3634 -0.9451 0.4034 24 1 -0.3633 0.8220 0.6167 25 1 -0.1486 2.0727 -0.1606 26 1 0.0947 3.2457 2.2319 27 1 0.0500 4.6847 3.0980 28 1 -1.8171 5.2687 -0.6928 29 1 -1.9207 3.4696 -0.9239 30 1 -0.9542 2.9092 -3.4474 31 1 1.6674 4.5651 -1.6903 32 1 0.7119 6.0408 -1.2339 33 1 4.4584 1.3143 -0.0110 34 1 4.4132 -1.3613 0.0011 35 1 1.6546 -2.8719 -1.0276 36 1 0.1399 -3.4952 0.7114 37 1 3.1784 -3.1464 2.2815 38 1 2.5600 -5.0198 0.8580 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_10803936.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:57:37 Heat of formation + Delta-G solvation = -46.903711 kcal Electronic energy + Delta-G solvation = -25382.138365 eV Core-core repulsion = 21615.233450 eV Total energy + Delta-G solvation = -3766.904915 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.125 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.75582 -41.92106 -39.57311 -39.04029 -38.04475 -36.23480 -34.93259 -34.40913 -33.17091 -31.43996 -27.84292 -27.54054 -27.08762 -26.16808 -23.28346 -22.27937 -21.49643 -20.68232 -20.33264 -19.18670 -18.78230 -18.64716 -18.05269 -17.90620 -16.94586 -16.86749 -16.65477 -16.15669 -15.97512 -15.52361 -15.35427 -15.12316 -14.93877 -14.68703 -14.39572 -14.00091 -13.75688 -13.64589 -13.42940 -13.35506 -13.18852 -13.00886 -12.67936 -12.34748 -12.10959 -11.90058 -11.33016 -11.17463 -11.00575 -10.88721 -10.65011 -10.04053 -9.71972 -9.03636 -5.02840 0.40572 1.06491 1.50385 1.52578 1.67477 1.76781 1.88776 1.95775 2.37634 2.56832 2.80068 2.92108 3.23673 3.30548 3.45440 3.55623 3.60624 3.79740 3.89228 4.01041 4.16198 4.21872 4.36329 4.45318 4.46988 4.51320 4.69865 4.75116 4.81117 5.07300 5.11903 5.19988 5.29199 5.72124 5.80736 5.97019 6.08123 6.12215 6.29988 6.37630 6.52548 7.13030 7.27509 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.411 5.411 3 C -0.059 4.059 4 C 0.595 3.405 5 O -0.514 6.514 6 N -0.712 5.712 7 C 0.129 3.871 8 C 0.532 3.468 9 N -0.848 5.848 10 O -0.532 6.532 11 C -0.154 4.154 12 C 0.082 3.918 13 H 0.082 0.918 14 O -0.544 6.544 15 C -0.114 4.114 16 C -0.096 4.096 17 C -0.204 4.204 18 C 0.065 3.935 19 C -0.056 4.056 20 O -0.543 6.543 21 Si 0.714 3.286 22 H 0.080 0.920 23 H 0.125 0.875 24 H 0.076 0.924 25 H 0.401 0.599 26 H 0.397 0.603 27 H 0.403 0.597 28 H 0.113 0.887 29 H 0.085 0.915 30 H 0.380 0.620 31 H 0.095 0.905 32 H 0.119 0.881 33 H 0.153 0.847 34 H 0.156 0.844 35 H 0.084 0.916 36 H 0.385 0.615 37 H -0.252 1.252 38 H -0.259 1.259 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.671 -7.632 -2.414 9.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 N -0.087 5.087 3 C -0.170 4.170 4 C 0.384 3.616 5 O -0.388 6.388 6 N -0.372 5.372 7 C 0.039 3.961 8 C 0.314 3.686 9 N -0.411 5.411 10 O -0.408 6.408 11 C -0.193 4.193 12 C 0.023 3.977 13 H 0.100 0.900 14 O -0.349 6.349 15 C -0.152 4.152 16 C -0.122 4.122 17 C -0.227 4.227 18 C -0.052 4.052 19 C -0.165 4.165 20 O -0.353 6.353 21 Si 0.613 3.387 22 H 0.098 0.902 23 H 0.143 0.857 24 H 0.094 0.906 25 H 0.242 0.758 26 H 0.226 0.774 27 H 0.234 0.766 28 H 0.131 0.869 29 H 0.104 0.896 30 H 0.228 0.772 31 H 0.114 0.886 32 H 0.138 0.862 33 H 0.171 0.829 34 H 0.173 0.827 35 H 0.102 0.898 36 H 0.235 0.765 37 H -0.176 1.176 38 H -0.183 1.183 Dipole moment (debyes) X Y Z Total from point charges -3.643 -5.983 -1.471 7.157 hybrid contribution -2.193 -1.086 0.182 2.454 sum -5.835 -7.070 -1.288 9.257 Atomic orbital electron populations 1.22647 0.77101 1.06320 1.03433 1.43798 1.06176 1.04831 1.53867 1.20366 0.91300 0.85695 1.19674 1.17058 0.81800 0.86838 0.75953 1.90900 1.53409 1.45871 1.48643 1.46115 1.08088 1.06819 1.76211 1.21465 0.98886 0.83017 0.92734 1.20455 0.74691 0.87633 0.85798 1.43781 1.77481 1.11115 1.08735 1.90764 1.49022 1.13697 1.87268 1.23960 0.94177 1.04435 0.96694 1.22690 0.96233 0.86594 0.92193 0.90014 1.86548 1.45025 1.37018 1.66326 1.23314 0.99492 1.01424 0.90960 1.21276 0.94729 0.94391 1.01810 1.20545 0.94653 0.95263 1.12288 1.19910 0.90586 0.86719 1.08014 1.24587 0.93029 0.97120 1.01769 1.86375 1.34625 1.34531 1.79725 0.94239 0.86037 0.76097 0.82373 0.90191 0.85667 0.90603 0.75769 0.77448 0.76594 0.86884 0.89625 0.77243 0.88614 0.86244 0.82916 0.82687 0.89820 0.76502 1.17619 1.18339 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.11 9.34 59.85 0.56 0.45 16 2 N -0.41 -0.28 3.16 -115.61 -0.37 -0.64 16 3 C -0.06 -0.17 6.88 -81.98 -0.56 -0.73 16 4 C 0.60 2.18 7.28 -12.85 -0.09 2.08 16 5 O -0.51 -3.75 15.31 5.19 0.08 -3.67 16 6 N -0.71 -0.34 3.58 -49.13 -0.18 -0.51 16 7 C 0.13 0.18 1.01 -132.07 -0.13 0.05 16 8 C 0.53 1.93 7.03 -10.99 -0.08 1.85 16 9 N -0.85 -0.66 8.84 31.22 0.28 -0.38 16 10 O -0.53 -3.90 16.91 5.56 0.09 -3.81 16 11 C -0.15 0.24 7.22 -25.82 -0.19 0.06 16 12 C 0.08 -0.06 5.28 -25.92 -0.14 -0.20 16 13 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 14 O -0.54 0.39 13.10 -35.23 -0.46 -0.07 16 15 C -0.11 -0.29 6.61 -25.92 -0.17 -0.46 16 16 C -0.10 -0.25 10.66 -39.12 -0.42 -0.67 16 17 C -0.20 -0.11 9.37 -39.98 -0.37 -0.49 16 18 C 0.06 0.03 6.18 -81.95 -0.51 -0.48 16 19 C -0.06 0.13 2.98 36.00 0.11 0.23 16 20 O -0.54 1.40 9.69 -35.23 -0.34 1.06 16 21 Si 0.71 -1.79 31.10 -169.99 -5.29 -7.08 16 22 H 0.08 -0.28 8.12 -51.92 -0.42 -0.70 16 23 H 0.13 -0.33 4.98 -51.93 -0.26 -0.59 16 24 H 0.08 -0.29 5.94 -51.93 -0.31 -0.60 16 25 H 0.40 -0.77 4.38 -40.82 -0.18 -0.95 16 26 H 0.40 -0.41 8.00 -40.82 -0.33 -0.74 16 27 H 0.40 -0.04 8.93 -40.82 -0.36 -0.41 16 28 H 0.11 -0.18 8.09 -51.93 -0.42 -0.60 16 29 H 0.09 -0.31 8.12 -51.93 -0.42 -0.73 16 30 H 0.38 -1.90 9.12 45.56 0.42 -1.49 16 31 H 0.10 0.48 6.80 -51.93 -0.35 0.13 16 32 H 0.12 0.35 7.39 -51.93 -0.38 -0.03 16 33 H 0.15 0.35 8.06 -52.49 -0.42 -0.08 16 34 H 0.16 -0.38 6.85 -52.49 -0.36 -0.74 16 35 H 0.08 -0.32 7.96 -51.93 -0.41 -0.73 16 36 H 0.38 -2.41 8.74 45.56 0.40 -2.01 16 37 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 38 H -0.26 0.22 7.11 56.52 0.40 0.62 16 LS Contribution 315.38 15.07 4.75 4.75 Total: 0.00 -12.01 315.38 -6.86 -18.88 By element: Atomic # 1 Polarization: -6.78 SS G_CDS: -3.44 Total: -10.22 kcal Atomic # 6 Polarization: 3.69 SS G_CDS: -2.00 Total: 1.69 kcal Atomic # 7 Polarization: -1.27 SS G_CDS: -0.27 Total: -1.54 kcal Atomic # 8 Polarization: -5.85 SS G_CDS: -0.63 Total: -6.48 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: -5.29 Total: -7.08 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -12.01 -6.86 -18.88 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_10803936.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.028 kcal (2) G-P(sol) polarization free energy of solvation -12.011 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.864 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.875 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.904 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds