Wall clock time and date at job start Sun Mar 7 2021 04:57:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34780 * 1 3 3 O 1.21271 * 119.99930 * 2 1 4 4 C 1.50700 * 119.99877 * 180.02562 * 2 1 3 5 5 N 1.46502 * 112.85146 * 36.11966 * 4 2 1 6 6 C 1.34774 * 119.99654 * 67.24648 * 5 4 2 7 7 O 1.21724 * 120.00342 * 355.06097 * 6 5 4 8 8 C 1.46576 * 120.00113 * 175.05546 * 6 5 4 9 9 C 1.40846 * 126.58013 * 180.02562 * 8 6 5 10 10 C 1.40093 * 132.86857 * 359.94350 * 9 8 6 11 11 C 1.36450 * 119.25333 * 180.02562 * 10 9 8 12 12 C 1.50700 * 120.29347 * 180.02562 * 11 10 9 13 13 O 1.42899 * 109.47361 * 119.99757 * 12 11 10 14 14 Si 1.86298 * 109.47149 * 239.99808 * 12 11 10 15 15 C 1.40159 * 119.41392 * 0.27478 * 11 10 9 16 16 C 1.35189 * 120.31049 * 359.41607 * 15 11 10 17 17 N 1.36239 * 120.71121 * 0.61359 * 16 15 11 18 18 N 1.40016 * 132.01619 * 179.67293 * 17 16 15 19 19 C 1.30738 * 109.60663 * 179.97438 * 18 17 16 20 20 C 1.53782 * 113.68921 * 264.85523 * 4 2 1 21 21 C 1.53784 * 87.07888 * 220.00685 * 20 4 2 22 22 H 1.09002 * 113.68890 * 139.99527 * 21 20 4 23 23 O 1.42900 * 113.61394 * 270.88327 * 21 20 4 24 24 C 1.53775 * 113.61586 * 167.31682 * 4 2 1 25 25 H 0.96998 * 120.00236 * 175.00688 * 1 2 3 26 26 H 0.97000 * 120.00159 * 355.00410 * 1 2 3 27 27 H 0.97001 * 120.00606 * 247.24883 * 5 4 2 28 28 H 1.07997 * 120.37290 * 0.04122 * 10 9 8 29 29 H 1.09003 * 109.47113 * 359.97438 * 12 11 10 30 30 H 0.96693 * 114.00164 * 179.97438 * 13 12 11 31 31 H 1.48497 * 110.00249 * 300.00097 * 14 12 11 32 32 H 1.48506 * 109.99871 * 61.32122 * 14 12 11 33 33 H 1.07995 * 119.84640 * 179.70242 * 15 11 10 34 34 H 1.08005 * 119.64190 * 180.30297 * 16 15 11 35 35 H 1.08000 * 125.62531 * 179.97438 * 19 18 17 36 36 H 1.08996 * 113.61457 * 334.55615 * 20 4 2 37 37 H 1.09007 * 113.61507 * 105.46037 * 20 4 2 38 38 H 0.96703 * 114.00125 * 277.49996 * 23 21 20 39 39 H 1.08994 * 113.61889 * 254.61481 * 24 4 2 40 40 H 1.09002 * 113.61071 * 25.43317 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0502 0.0000 4 6 2.1013 -1.3051 -0.0006 5 7 1.4413 -2.3427 -0.7969 6 6 1.3566 -2.2128 -2.1356 7 8 1.7473 -1.1935 -2.6742 8 6 0.7941 -3.2990 -2.9433 9 6 0.6409 -3.3113 -4.3433 10 6 0.9443 -2.3785 -5.3436 11 6 0.6723 -2.6844 -6.6452 12 6 0.9895 -1.6986 -7.7400 13 8 1.9148 -2.2862 -8.6568 14 14 -0.5767 -1.2472 -8.6422 15 6 0.0905 -3.9214 -6.9545 16 6 -0.1880 -4.8088 -5.9734 17 7 0.0794 -4.5125 -4.6708 18 7 -0.1127 -5.2349 -3.4869 19 6 0.3052 -4.5285 -2.4692 20 6 2.5196 -1.7777 1.4018 21 6 3.8518 -2.2158 0.7708 22 1 4.7212 -2.0077 1.3945 23 8 3.8354 -3.5543 0.2706 24 6 3.5997 -1.1512 -0.3099 25 1 -0.4850 -0.8368 -0.0731 26 1 -0.4850 0.8368 0.0732 27 1 1.0652 -3.1232 -0.3606 28 1 1.3886 -1.4281 -5.0873 29 1 1.4292 -0.8012 -7.3047 30 1 2.1641 -1.7068 -9.3897 31 1 -1.1865 -2.4620 -9.2403 32 1 -1.5351 -0.6060 -7.7064 33 1 -0.1322 -4.1688 -7.9819 34 1 -0.6319 -5.7609 -6.2245 35 1 0.2781 -4.8382 -1.4349 36 1 2.6236 -0.9669 2.1227 37 1 1.9216 -2.6072 1.7794 38 1 3.9933 -4.2285 0.9456 39 1 3.8739 -1.4748 -1.3139 40 1 3.9988 -0.1686 -0.0581 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_11618758.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:57:39 Heat of formation + Delta-G solvation = -2.758157 kcal Electronic energy + Delta-G solvation = -29135.721017 eV Core-core repulsion = 24920.626064 eV Total energy + Delta-G solvation = -4215.094953 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.120 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.31786 -42.04531 -39.67570 -39.16197 -38.94942 -37.32649 -36.05083 -34.63585 -34.30571 -33.60619 -32.17677 -30.30893 -27.55971 -27.04216 -26.63826 -24.95624 -23.76750 -22.99102 -22.25623 -21.31438 -20.23316 -19.27429 -19.00656 -18.52104 -18.17051 -17.88986 -17.73320 -17.44067 -16.90602 -16.75916 -16.59284 -15.96809 -15.86280 -15.56966 -15.41677 -15.33572 -14.95298 -14.63851 -14.56572 -14.31268 -13.95235 -13.79516 -13.41692 -13.34085 -13.05053 -13.01363 -12.61757 -12.37253 -12.10696 -11.95485 -11.75781 -11.60638 -11.19684 -11.06315 -10.78726 -10.74877 -10.57185 -10.28831 -9.91850 -8.78655 -5.16388 -0.58451 -0.14173 0.97223 1.04621 1.12776 1.52196 1.60025 1.84841 1.99947 2.09378 2.48263 2.65942 2.95782 2.98052 3.10343 3.30340 3.40176 3.41832 3.60084 3.66666 3.67091 3.83451 3.90527 3.99376 4.13205 4.23364 4.23778 4.40101 4.51076 4.51953 4.56279 4.71752 4.81560 4.89582 5.07078 5.12610 5.13196 5.23116 5.44376 5.62682 5.87689 6.29007 6.38642 6.46031 6.53850 6.59077 7.31602 7.37924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.849 5.849 2 C 0.533 3.467 3 O -0.532 6.532 4 C 0.138 3.862 5 N -0.701 5.701 6 C 0.605 3.395 7 O -0.536 6.536 8 C -0.312 4.312 9 C 0.169 3.831 10 C -0.094 4.094 11 C -0.029 4.029 12 C -0.074 4.074 13 O -0.542 6.542 14 Si 0.704 3.296 15 C -0.146 4.146 16 C 0.114 3.886 17 N -0.264 5.264 18 N -0.312 5.312 19 C 0.122 3.878 20 C -0.157 4.157 21 C 0.082 3.918 22 H 0.080 0.920 23 O -0.543 6.543 24 C -0.115 4.115 25 H 0.399 0.601 26 H 0.401 0.599 27 H 0.403 0.597 28 H 0.165 0.835 29 H 0.082 0.918 30 H 0.388 0.612 31 H -0.248 1.248 32 H -0.256 1.256 33 H 0.162 0.838 34 H 0.178 0.822 35 H 0.199 0.801 36 H 0.110 0.890 37 H 0.089 0.911 38 H 0.381 0.619 39 H 0.090 0.910 40 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.268 -2.196 -0.282 3.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.316 3.684 3 O -0.407 6.407 4 C 0.047 3.953 5 N -0.355 5.355 6 C 0.394 3.606 7 O -0.413 6.413 8 C -0.327 4.327 9 C 0.048 3.952 10 C -0.113 4.113 11 C -0.035 4.035 12 C -0.183 4.183 13 O -0.349 6.349 14 Si 0.602 3.398 15 C -0.167 4.167 16 C -0.012 4.012 17 N -0.029 5.029 18 N -0.132 5.132 19 C -0.059 4.059 20 C -0.195 4.195 21 C 0.022 3.978 22 H 0.098 0.902 23 O -0.348 6.348 24 C -0.153 4.153 25 H 0.227 0.773 26 H 0.232 0.768 27 H 0.239 0.761 28 H 0.182 0.818 29 H 0.100 0.900 30 H 0.236 0.764 31 H -0.172 1.172 32 H -0.180 1.180 33 H 0.179 0.821 34 H 0.196 0.804 35 H 0.216 0.784 36 H 0.128 0.872 37 H 0.107 0.893 38 H 0.228 0.772 39 H 0.109 0.891 40 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -3.007 -2.391 -1.119 4.001 hybrid contribution -0.058 -0.360 1.490 1.534 sum -3.065 -2.751 0.371 4.135 Atomic orbital electron populations 1.43772 1.07293 1.12912 1.77225 1.20429 0.82710 0.90689 0.74580 1.90750 1.68217 1.32662 1.49090 1.21338 0.93641 0.86165 0.94159 1.45225 1.60352 1.23816 1.06092 1.16818 0.77270 0.85474 0.81024 1.90839 1.49149 1.29640 1.71665 1.19496 1.23004 0.99407 0.90820 1.19215 0.95082 0.86839 0.94104 1.20710 1.00516 1.00489 0.89605 1.19443 0.96013 0.94228 0.93808 1.24703 1.04311 0.96322 0.92981 1.86473 1.63979 1.44521 1.39933 0.95286 0.75665 0.84046 0.84774 1.20849 1.02181 0.93557 1.00103 1.21580 0.99488 1.01538 0.78609 1.46079 1.38375 1.11914 1.06506 1.77635 1.29135 1.18348 0.88079 1.24048 0.92209 0.90745 0.98914 1.23932 0.98954 1.02703 0.93915 1.22684 0.95725 0.83597 0.95752 0.90244 1.86548 1.94787 1.14765 1.38749 1.23303 0.91777 0.99206 1.01022 0.77269 0.76772 0.76123 0.81786 0.89950 0.76398 1.17233 1.18021 0.82057 0.80441 0.78427 0.87207 0.89286 0.77176 0.89139 0.86387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 -0.20 8.83 31.22 0.28 0.08 16 2 C 0.53 1.80 6.60 -10.98 -0.07 1.73 16 3 O -0.53 -3.99 16.74 5.57 0.09 -3.90 16 4 C 0.14 0.13 0.96 -132.16 -0.13 0.01 16 5 N -0.70 0.07 4.06 -49.25 -0.20 -0.13 16 6 C 0.60 2.02 7.26 -12.90 -0.09 1.93 16 7 O -0.54 -3.69 14.41 5.17 0.07 -3.62 16 8 C -0.31 -0.92 6.17 -104.68 -0.65 -1.57 16 9 C 0.17 0.66 6.76 -84.07 -0.57 0.10 16 10 C -0.09 -0.30 9.35 -39.53 -0.37 -0.67 16 11 C -0.03 -0.05 4.53 -104.55 -0.47 -0.52 16 12 C -0.07 0.06 2.81 36.01 0.10 0.16 16 13 O -0.54 0.52 12.76 -35.23 -0.45 0.07 16 14 Si 0.70 -1.46 31.95 -169.99 -5.43 -6.89 16 15 C -0.15 -0.09 8.67 -39.95 -0.35 -0.44 16 16 C 0.11 0.10 11.17 -16.68 -0.19 -0.08 16 17 N -0.26 -0.85 3.86 -10.55 -0.04 -0.89 16 18 N -0.31 -0.98 12.57 30.75 0.39 -0.60 16 19 C 0.12 0.12 11.44 -17.15 -0.20 -0.08 16 20 C -0.16 0.33 7.20 -25.92 -0.19 0.14 16 21 C 0.08 -0.08 5.28 -25.92 -0.14 -0.22 16 22 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 23 O -0.54 0.53 13.09 -35.23 -0.46 0.07 16 24 C -0.11 -0.27 6.66 -25.92 -0.17 -0.44 16 25 H 0.40 -0.82 8.33 -40.82 -0.34 -1.16 16 26 H 0.40 -0.17 8.93 -40.82 -0.36 -0.54 16 27 H 0.40 -1.27 7.61 -40.82 -0.31 -1.58 16 28 H 0.16 0.56 7.01 -52.49 -0.37 0.20 16 29 H 0.08 -0.15 7.71 -51.93 -0.40 -0.55 16 30 H 0.39 -2.29 8.74 45.56 0.40 -1.89 16 31 H -0.25 -0.01 7.06 56.52 0.40 0.39 16 32 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 33 H 0.16 -0.20 7.50 -52.49 -0.39 -0.60 16 34 H 0.18 -0.37 8.06 -52.48 -0.42 -0.79 16 35 H 0.20 -0.71 7.47 -52.49 -0.39 -1.10 16 36 H 0.11 -0.24 8.10 -51.93 -0.42 -0.66 16 37 H 0.09 -0.37 8.10 -51.93 -0.42 -0.79 16 38 H 0.38 -1.97 9.12 45.56 0.42 -1.56 16 39 H 0.09 0.44 7.39 -51.93 -0.38 0.05 16 40 H 0.12 0.34 7.34 -51.93 -0.38 -0.04 16 LS Contribution 346.85 15.07 5.23 5.23 Total: 0.00 -14.29 346.85 -7.41 -21.70 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -3.41 Total: -11.16 kcal Atomic # 6 Polarization: 3.52 SS G_CDS: -3.47 Total: 0.05 kcal Atomic # 7 Polarization: -1.97 SS G_CDS: 0.42 Total: -1.54 kcal Atomic # 8 Polarization: -6.64 SS G_CDS: -0.74 Total: -7.38 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.43 Total: -6.89 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -14.29 -7.41 -21.70 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_11618758.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.939 kcal (2) G-P(sol) polarization free energy of solvation -14.291 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.697 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds