Wall clock time and date at job start Sun Mar 7 2021 04:57:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35453 * 125.56167 * 2 1 4 4 C 1.50697 * 126.06775 * 0.24720 * 3 2 1 5 5 O 1.42901 * 109.46893 * 235.81364 * 4 3 2 6 6 Si 1.86299 * 109.47313 * 115.81222 * 4 3 2 7 7 C 1.39834 * 107.86423 * 179.97438 * 3 2 1 8 8 C 1.50697 * 126.46078 * 179.97438 * 7 3 2 9 9 C 1.37870 * 107.08319 * 0.02562 * 7 3 2 10 10 C 1.46688 * 126.23272 * 180.02562 * 9 7 3 11 11 O 1.21692 * 120.00058 * 359.97438 * 10 9 7 12 12 N 1.34774 * 120.00058 * 179.97438 * 10 9 7 13 13 C 1.46493 * 120.00176 * 185.04765 * 12 10 9 14 14 C 1.50695 * 112.85253 * 65.88860 * 13 12 10 15 15 N 1.34773 * 119.99980 * 35.61078 * 14 13 12 16 16 O 1.21285 * 120.00246 * 215.61872 * 14 13 12 17 17 C 1.53787 * 113.61271 * 294.69249 * 13 12 10 18 18 C 1.53782 * 87.07902 * 270.88375 * 17 13 12 19 19 H 1.08999 * 113.61090 * 220.01522 * 18 17 13 20 20 O 1.42902 * 113.61711 * 89.20287 * 18 17 13 21 21 C 1.53780 * 87.08203 * 334.56627 * 18 17 13 22 22 N 1.35530 * 125.56643 * 179.97438 * 2 1 3 23 23 H 1.09000 * 109.47670 * 92.62089 * 1 2 3 24 24 H 1.09004 * 109.47088 * 212.61953 * 1 2 3 25 25 H 1.09002 * 109.47099 * 332.61890 * 1 2 3 26 26 H 1.09004 * 109.47505 * 355.80759 * 4 3 2 27 27 H 0.96705 * 114.00390 * 180.02562 * 5 4 3 28 28 H 1.48493 * 110.00131 * 305.30459 * 6 4 3 29 29 H 1.48507 * 109.99822 * 66.62076 * 6 4 3 30 30 H 1.09004 * 109.46699 * 89.99883 * 8 7 3 31 31 H 1.09002 * 109.47353 * 210.00204 * 8 7 3 32 32 H 1.09002 * 109.46842 * 330.00582 * 8 7 3 33 33 H 0.96998 * 119.99957 * 5.04004 * 12 10 9 34 34 H 0.96995 * 120.00167 * 5.27768 * 15 14 13 35 35 H 0.97003 * 119.99866 * 185.27254 * 15 14 13 36 36 H 1.08998 * 113.61199 * 25.43129 * 17 13 12 37 37 H 1.08996 * 113.61640 * 156.25042 * 17 13 12 38 38 H 0.96689 * 114.00401 * 180.02562 * 20 18 17 39 39 H 1.09001 * 113.61326 * 270.88300 * 21 18 17 40 40 H 1.09003 * 113.61298 * 139.98390 * 21 18 17 41 41 H 0.97004 * 125.67197 * 359.97438 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5321 0.0053 5 8 2.3843 3.2255 -1.1095 6 14 2.3555 3.3585 1.5866 7 6 3.6269 0.6768 0.0006 8 6 4.8485 1.5592 0.0003 9 6 3.6122 -0.7018 0.0004 10 6 4.7860 -1.5815 0.0013 11 8 5.9049 -1.1030 0.0020 12 7 4.6253 -2.9196 0.0015 13 6 5.7927 -3.7975 0.1141 14 6 6.4865 -3.6806 1.4467 15 7 5.7652 -3.4738 2.5661 16 8 7.6941 -3.7725 1.5118 17 6 6.7481 -3.7091 -1.0878 18 6 5.9077 -4.8212 -1.7373 19 1 6.5027 -5.5645 -2.2681 20 8 4.8114 -4.3318 -2.5123 21 6 5.5157 -5.2486 -0.3131 22 7 2.2953 -1.1025 0.0005 23 1 -0.3634 -0.0470 -1.0265 24 1 -0.3633 -0.8656 0.5540 25 1 -0.3633 0.9125 0.4726 26 1 0.7324 2.5541 -0.0660 27 1 2.1213 4.1542 -1.1693 28 1 1.8819 2.5743 2.7553 29 1 3.8353 3.4781 1.6212 30 1 5.1428 1.7727 1.0279 31 1 5.6643 1.0502 -0.5131 32 1 4.6220 2.4931 -0.5142 33 1 3.7368 -3.3014 -0.0728 34 1 4.7960 -3.4765 2.5261 35 1 6.2152 -3.3222 3.4120 36 1 6.6970 -2.7577 -1.6170 37 1 7.7697 -4.0106 -0.8565 38 1 4.2789 -5.0265 -2.9230 39 1 6.2001 -5.9723 0.1296 40 1 4.4697 -5.5399 -0.2170 41 1 1.9833 -2.0210 0.0013 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12297754.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:57:42 Heat of formation + Delta-G solvation = -75.445056 kcal Electronic energy + Delta-G solvation = -27192.138133 eV Core-core repulsion = 23268.457953 eV Total energy + Delta-G solvation = -3923.680180 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.78417 -42.01166 -39.58910 -39.10430 -37.60862 -36.22145 -34.79132 -34.16585 -33.68406 -32.82308 -29.26032 -27.94617 -27.13214 -26.83241 -25.94447 -22.89938 -22.26602 -20.85594 -20.43135 -19.89328 -19.43959 -19.10621 -18.28162 -18.07589 -17.88426 -16.94362 -16.66904 -16.32256 -15.97727 -15.79008 -15.42828 -15.17414 -15.09524 -14.95730 -14.66090 -14.31746 -14.08501 -13.87522 -13.77494 -13.71170 -13.51602 -13.22574 -13.11661 -13.04679 -12.56446 -12.49650 -12.36724 -11.91259 -11.65381 -11.30607 -11.18708 -10.84666 -10.68649 -10.49130 -10.09484 -9.49527 -9.01836 -4.87518 0.38343 1.22528 1.42838 1.63305 1.81251 1.84753 1.95047 2.20795 2.30434 2.50610 2.87390 3.19136 3.28777 3.51084 3.55922 3.68834 3.72833 3.85348 3.97509 4.16336 4.19428 4.28628 4.38751 4.40525 4.46081 4.47362 4.63981 4.69311 4.74859 4.78464 4.97139 5.06230 5.07959 5.24843 5.35017 5.43904 5.67333 5.76276 5.90351 6.20382 6.27233 6.38491 6.48951 6.78187 7.10905 7.23145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.080 3.920 3 C -0.170 4.170 4 C -0.024 4.024 5 O -0.544 6.544 6 Si 0.666 3.334 7 C -0.040 4.040 8 C -0.099 4.099 9 C -0.066 4.066 10 C 0.596 3.404 11 O -0.508 6.508 12 N -0.705 5.705 13 C 0.134 3.866 14 C 0.531 3.469 15 N -0.850 5.850 16 O -0.528 6.528 17 C -0.114 4.114 18 C 0.082 3.918 19 H 0.081 0.919 20 O -0.544 6.544 21 C -0.157 4.157 22 N -0.534 5.534 23 H 0.083 0.917 24 H 0.071 0.929 25 H 0.088 0.912 26 H 0.068 0.932 27 H 0.379 0.621 28 H -0.264 1.264 29 H -0.246 1.246 30 H 0.063 0.937 31 H 0.082 0.918 32 H 0.077 0.923 33 H 0.398 0.602 34 H 0.398 0.602 35 H 0.403 0.597 36 H 0.094 0.906 37 H 0.119 0.881 38 H 0.381 0.619 39 H 0.112 0.888 40 H 0.087 0.913 41 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.852 -2.221 0.301 10.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.038 4.038 3 C -0.177 4.177 4 C -0.135 4.135 5 O -0.349 6.349 6 Si 0.566 3.434 7 C -0.049 4.049 8 C -0.156 4.156 9 C -0.176 4.176 10 C 0.384 3.616 11 O -0.382 6.382 12 N -0.359 5.359 13 C 0.044 3.956 14 C 0.313 3.687 15 N -0.412 5.412 16 O -0.402 6.402 17 C -0.152 4.152 18 C 0.022 3.978 19 H 0.099 0.901 20 O -0.350 6.350 21 C -0.195 4.195 22 N -0.132 5.132 23 H 0.101 0.899 24 H 0.090 0.910 25 H 0.106 0.894 26 H 0.086 0.914 27 H 0.226 0.774 28 H -0.189 1.189 29 H -0.170 1.170 30 H 0.081 0.919 31 H 0.101 0.899 32 H 0.096 0.904 33 H 0.233 0.767 34 H 0.226 0.774 35 H 0.234 0.766 36 H 0.112 0.888 37 H 0.137 0.863 38 H 0.228 0.772 39 H 0.130 0.870 40 H 0.105 0.895 41 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges -7.220 -2.215 1.006 7.619 hybrid contribution -1.337 -1.765 -0.025 2.214 sum -8.557 -3.979 0.981 9.488 Atomic orbital electron populations 1.20520 0.87048 1.04082 1.03645 1.20264 0.93659 0.85463 1.04426 1.18461 0.92479 0.92783 1.13941 1.23866 0.99187 0.91162 0.99319 1.86521 1.73615 1.27253 1.47553 0.96591 0.83413 0.88005 0.75400 1.19833 0.95030 0.90926 0.99065 1.20528 0.94301 0.98681 1.02068 1.19974 0.82663 0.93864 1.21146 1.16971 0.87680 0.80849 0.76097 1.90888 1.23961 1.74667 1.48646 1.45373 1.08578 1.05210 1.76745 1.21390 0.88493 0.92583 0.93150 1.20423 0.87426 0.75092 0.85712 1.43776 1.10887 1.75562 1.11021 1.90769 1.13774 1.49124 1.86513 1.23320 0.98361 1.00756 0.92809 1.22699 0.88775 0.96584 0.89720 0.90067 1.86542 1.43269 1.37086 1.68069 1.23948 1.03811 0.93277 0.98485 1.41744 1.05293 1.08230 1.57931 0.89880 0.91008 0.89370 0.91411 0.77359 1.18920 1.17006 0.91877 0.89895 0.90373 0.76704 0.77445 0.76559 0.88769 0.86257 0.77178 0.87007 0.89464 0.74644 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.30 10.08 36.01 0.36 0.66 16 2 C 0.08 0.03 7.13 -81.95 -0.58 -0.56 16 3 C -0.17 -0.46 4.51 -105.02 -0.47 -0.93 16 4 C -0.02 -0.01 2.75 36.00 0.10 0.09 16 5 O -0.54 -0.49 11.65 -35.23 -0.41 -0.90 16 6 Si 0.67 0.12 31.53 -169.99 -5.36 -5.24 16 7 C -0.04 -0.19 5.86 -104.16 -0.61 -0.80 16 8 C -0.10 -0.54 8.11 36.00 0.29 -0.25 16 9 C -0.07 -0.20 7.05 -81.98 -0.58 -0.78 16 10 C 0.60 2.16 7.34 -12.85 -0.09 2.07 16 11 O -0.51 -3.83 13.34 5.20 0.07 -3.76 16 12 N -0.70 0.10 4.18 -49.22 -0.21 -0.10 16 13 C 0.13 0.13 0.94 -132.16 -0.12 0.00 16 14 C 0.53 1.78 6.75 -10.99 -0.07 1.70 16 15 N -0.85 -0.12 8.78 31.22 0.27 0.16 16 16 O -0.53 -3.96 16.75 5.55 0.09 -3.87 16 17 C -0.11 -0.28 6.63 -25.91 -0.17 -0.45 16 18 C 0.08 -0.08 5.27 -25.92 -0.14 -0.22 16 19 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 20 O -0.54 0.53 13.09 -35.23 -0.46 0.07 16 21 C -0.16 0.35 7.20 -25.92 -0.19 0.16 16 22 N -0.53 0.30 5.99 -5.69 -0.03 0.27 16 23 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 24 H 0.07 -0.33 8.14 -51.93 -0.42 -0.76 16 25 H 0.09 -0.33 7.03 -51.93 -0.37 -0.69 16 26 H 0.07 -0.13 6.56 -51.93 -0.34 -0.47 16 27 H 0.38 -1.56 8.74 45.56 0.40 -1.17 16 28 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 29 H -0.25 -0.88 6.24 56.52 0.35 -0.53 16 30 H 0.06 0.36 7.65 -51.93 -0.40 -0.04 16 31 H 0.08 0.56 6.48 -51.93 -0.34 0.22 16 32 H 0.08 0.39 6.69 -51.93 -0.35 0.04 16 33 H 0.40 -1.31 7.81 -40.82 -0.32 -1.63 16 34 H 0.40 -0.99 8.46 -40.82 -0.35 -1.33 16 35 H 0.40 -0.11 8.93 -40.82 -0.36 -0.47 16 36 H 0.09 0.48 7.20 -51.93 -0.37 0.11 16 37 H 0.12 0.36 7.34 -51.93 -0.38 -0.02 16 38 H 0.38 -2.00 9.12 45.56 0.42 -1.59 16 39 H 0.11 -0.26 8.10 -51.93 -0.42 -0.68 16 40 H 0.09 -0.39 8.09 -51.93 -0.42 -0.81 16 41 H 0.42 -1.76 8.20 -40.82 -0.33 -2.10 16 LS Contribution 339.10 15.07 5.11 5.11 Total: 0.00 -13.59 339.10 -7.65 -21.24 By element: Atomic # 1 Polarization: -9.22 SS G_CDS: -4.45 Total: -13.67 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: -2.28 Total: 0.70 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: 0.03 Total: 0.32 kcal Atomic # 8 Polarization: -7.76 SS G_CDS: -0.71 Total: -8.47 kcal Atomic # 14 Polarization: 0.12 SS G_CDS: -5.36 Total: -5.24 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -13.59 -7.65 -21.24 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12297754.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.201 kcal (2) G-P(sol) polarization free energy of solvation -13.592 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.794 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds