Wall clock time and date at job start Sun Mar 7 2021 04:57:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35657 * 116.99966 * 2 1 4 4 C 1.38405 * 120.12051 * 0.02562 * 3 2 1 5 5 C 1.38723 * 120.03307 * 180.02562 * 4 3 2 6 6 O 1.35718 * 119.86558 * 179.97438 * 5 4 3 7 7 C 1.42899 * 116.99667 * 359.97438 * 6 5 4 8 8 C 1.39145 * 120.27336 * 359.97063 * 5 4 3 9 9 C 1.50696 * 119.88115 * 180.02562 * 8 5 4 10 10 O 1.42901 * 109.47564 * 284.98155 * 9 8 5 11 11 Si 1.86305 * 109.47465 * 164.97649 * 9 8 5 12 12 C 1.37584 * 120.23970 * 359.97438 * 8 5 4 13 13 C 1.39811 * 119.96623 * 0.02562 * 12 8 5 14 14 C 1.47304 * 120.14122 * 179.97438 * 13 12 8 15 15 O 1.21618 * 120.00430 * 180.02562 * 14 13 12 16 16 N 1.34780 * 119.99496 * 0.02562 * 14 13 12 17 17 C 1.46497 * 119.99930 * 175.05710 * 16 14 13 18 18 C 1.50701 * 112.85172 * 67.24851 * 17 16 14 19 19 N 1.34777 * 119.99591 * 36.13340 * 18 17 16 20 20 O 1.21280 * 119.99981 * 216.13220 * 18 17 16 21 21 C 1.53787 * 113.61104 * 296.05356 * 17 16 14 22 22 C 1.53784 * 87.08098 * 270.88307 * 21 17 16 23 23 H 1.08992 * 113.61514 * 220.01741 * 22 21 17 24 24 O 1.42901 * 113.61013 * 89.19905 * 22 21 17 25 25 C 1.53782 * 87.08331 * 334.57079 * 22 21 17 26 26 H 1.09000 * 109.47203 * 299.99634 * 1 2 3 27 27 H 1.09005 * 109.47358 * 59.99779 * 1 2 3 28 28 H 1.08996 * 109.46899 * 179.97438 * 1 2 3 29 29 H 1.08005 * 119.98313 * 359.97438 * 4 3 2 30 30 H 1.08998 * 109.46978 * 179.97438 * 7 6 5 31 31 H 1.09000 * 109.46843 * 299.99523 * 7 6 5 32 32 H 1.08995 * 109.47525 * 59.99289 * 7 6 5 33 33 H 1.09005 * 109.47064 * 44.97965 * 9 8 5 34 34 H 0.96700 * 113.99690 * 59.99315 * 10 9 8 35 35 H 1.48494 * 109.99918 * 300.00427 * 11 9 8 36 36 H 1.48504 * 109.99592 * 61.31940 * 11 9 8 37 37 H 1.07999 * 120.01725 * 179.74284 * 12 8 5 38 38 H 0.97006 * 119.99873 * 355.05011 * 16 14 13 39 39 H 0.96999 * 120.00593 * 355.00355 * 19 18 17 40 40 H 0.97003 * 119.99599 * 175.00219 * 19 18 17 41 41 H 1.08995 * 113.61217 * 25.43579 * 21 17 16 42 42 H 1.09003 * 113.60929 * 156.33804 * 21 17 16 43 43 H 0.96705 * 113.99895 * 180.02562 * 24 22 21 44 44 H 1.08998 * 113.60941 * 270.88605 * 25 22 21 45 45 H 1.08997 * 113.61419 * 139.97917 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2935 2.3711 0.0005 5 6 1.9252 3.6061 0.0000 6 8 1.1851 4.7437 0.0000 7 6 -0.2360 4.5931 0.0000 8 6 3.3145 3.6835 -0.0005 9 6 3.9915 5.0298 -0.0005 10 8 3.8939 5.6121 -1.3018 11 14 5.7863 4.8225 0.4542 12 6 4.0724 2.5352 0.0001 13 6 3.4462 1.2851 0.0007 14 6 4.2539 0.0533 0.0008 15 8 3.7066 -1.0328 0.0008 16 7 5.5995 0.1298 0.0008 17 6 6.4026 -1.0905 0.1102 18 6 6.2805 -1.9818 -1.0989 19 7 6.1652 -1.4390 -2.3271 20 8 6.2862 -3.1873 -0.9666 21 6 6.2163 -1.8329 1.4441 22 6 7.3609 -0.9666 1.9958 23 1 8.0477 -1.5113 2.6435 24 8 6.9208 0.2674 2.5665 25 6 7.8552 -0.8350 0.5455 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 0.2148 2.3165 0.0005 30 1 -0.7056 5.5767 0.0005 31 1 -0.5431 4.0439 -0.8900 32 1 -0.5431 4.0438 0.8899 33 1 3.5055 5.6809 0.7263 34 1 2.9857 5.7494 -1.6041 35 1 5.9013 4.2179 1.8056 36 1 6.4676 3.9627 -0.5467 37 1 5.1504 2.5994 -0.0044 38 1 6.0362 0.9930 -0.0717 39 1 6.0877 -0.4773 -2.4272 40 1 6.1596 -2.0102 -3.1111 41 1 5.2548 -1.6409 1.9201 42 1 6.4589 -2.8943 1.3905 43 1 7.6362 0.8169 2.9149 44 1 8.5457 -1.6236 0.2464 45 1 8.2167 0.1626 0.2963 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12297780.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:57:46 Heat of formation + Delta-G solvation = -151.173540 kcal Electronic energy + Delta-G solvation = -33636.490936 eV Core-core repulsion = 29009.362309 eV Total energy + Delta-G solvation = -4627.128627 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.144 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.37243 -41.81412 -40.29708 -39.47618 -39.02045 -38.39057 -36.96100 -36.06981 -34.63587 -33.80202 -32.25892 -31.62548 -29.17981 -28.39648 -27.10731 -26.81272 -26.08115 -24.63307 -23.03881 -22.28746 -21.60882 -20.31959 -20.04536 -19.05294 -18.82330 -18.55797 -18.09081 -17.85274 -17.57475 -17.29147 -17.14059 -16.68043 -16.56886 -16.39627 -16.01386 -15.85323 -15.71248 -15.53828 -15.33190 -15.01690 -14.81175 -14.32176 -14.27445 -14.00662 -13.83918 -13.62877 -13.52150 -13.31311 -13.02739 -12.88150 -12.72144 -12.60131 -12.37867 -12.20546 -11.79540 -11.76034 -11.34739 -11.20840 -11.09399 -11.07391 -10.68049 -10.56330 -10.01278 -9.91649 -9.20551 -4.88070 -0.29662 0.05545 1.31025 1.56925 1.60942 1.76950 1.85097 1.89271 2.01490 2.09032 2.53681 2.68362 2.96010 3.28290 3.32593 3.41259 3.45380 3.59667 3.65277 3.69561 3.87372 3.91242 3.93728 3.96797 4.01200 4.06964 4.08969 4.16255 4.27373 4.32807 4.42170 4.49379 4.50791 4.55049 4.71162 4.79796 4.83932 4.87780 4.96741 5.11272 5.20424 5.40413 5.86664 5.88652 6.19896 6.37197 6.46933 6.56942 6.57635 7.27387 7.36578 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.273 6.273 3 C 0.233 3.767 4 C -0.309 4.309 5 C 0.210 3.790 6 O -0.307 6.307 7 C 0.022 3.978 8 C -0.188 4.188 9 C -0.069 4.069 10 O -0.536 6.536 11 Si 0.741 3.259 12 C -0.009 4.009 13 C -0.203 4.203 14 C 0.568 3.432 15 O -0.501 6.501 16 N -0.706 5.706 17 C 0.135 3.865 18 C 0.534 3.466 19 N -0.849 5.849 20 O -0.531 6.531 21 C -0.114 4.114 22 C 0.082 3.918 23 H 0.081 0.919 24 O -0.545 6.545 25 C -0.158 4.158 26 H 0.058 0.942 27 H 0.058 0.942 28 H 0.108 0.892 29 H 0.146 0.854 30 H 0.109 0.891 31 H 0.061 0.939 32 H 0.060 0.940 33 H 0.076 0.924 34 H 0.366 0.634 35 H -0.243 1.243 36 H -0.252 1.252 37 H 0.136 0.864 38 H 0.400 0.600 39 H 0.399 0.601 40 H 0.402 0.598 41 H 0.090 0.910 42 H 0.119 0.881 43 H 0.381 0.619 44 H 0.112 0.888 45 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.128 7.910 0.494 7.927 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.183 3.817 4 C -0.328 4.328 5 C 0.162 3.838 6 O -0.219 6.219 7 C -0.072 4.072 8 C -0.189 4.189 9 C -0.178 4.178 10 O -0.341 6.341 11 Si 0.639 3.361 12 C -0.027 4.027 13 C -0.207 4.207 14 C 0.356 3.644 15 O -0.376 6.376 16 N -0.362 5.362 17 C 0.044 3.956 18 C 0.316 3.684 19 N -0.412 5.412 20 O -0.406 6.406 21 C -0.152 4.152 22 C 0.022 3.978 23 H 0.099 0.901 24 O -0.350 6.350 25 C -0.196 4.196 26 H 0.076 0.924 27 H 0.076 0.924 28 H 0.126 0.874 29 H 0.164 0.836 30 H 0.127 0.873 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.094 0.906 34 H 0.213 0.787 35 H -0.167 1.167 36 H -0.177 1.177 37 H 0.153 0.847 38 H 0.236 0.764 39 H 0.227 0.773 40 H 0.233 0.767 41 H 0.109 0.891 42 H 0.137 0.863 43 H 0.228 0.772 44 H 0.130 0.870 45 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 0.533 5.514 0.867 5.607 hybrid contribution -1.638 0.378 -0.585 1.780 sum -1.106 5.891 0.282 6.001 Atomic orbital electron populations 1.23255 0.78118 1.04977 1.01303 1.86415 1.21273 1.24885 1.85711 1.18699 0.90530 0.84537 0.87893 1.21288 1.01140 0.91421 1.18949 1.18715 0.90250 0.84842 0.89965 1.86038 1.19928 1.28735 1.87150 1.23228 0.77313 1.04811 1.01871 1.19440 0.90448 0.96727 1.12317 1.25116 1.13706 0.90357 0.88608 1.86708 1.32163 1.83283 1.31975 0.92986 0.75803 0.88095 0.79202 1.20746 0.98837 0.90231 0.92891 1.19006 0.90685 0.93364 1.17678 1.17803 0.81374 0.88771 0.76432 1.90903 1.71070 1.28374 1.47218 1.45464 1.05625 1.08291 1.76798 1.21384 0.93798 0.86270 0.94102 1.20390 0.74752 0.88612 0.84617 1.43767 1.77023 1.12034 1.08341 1.90752 1.49407 1.14568 1.85875 1.23307 1.00328 0.99684 0.91898 1.22695 0.96634 0.86423 0.92011 0.90073 1.86544 1.37387 1.31504 1.79546 1.23946 0.93282 1.04256 0.98107 0.92352 0.92380 0.87364 0.83603 0.87282 0.92082 0.92126 0.90639 0.78660 1.16707 1.17728 0.84732 0.76390 0.77293 0.76688 0.89128 0.86255 0.77162 0.87006 0.89367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.99 16 2 O -0.27 -1.16 8.56 -40.59 -0.35 -1.51 16 3 C 0.23 0.79 6.70 -38.73 -0.26 0.53 16 4 C -0.31 -0.32 8.01 -39.34 -0.31 -0.63 16 5 C 0.21 0.22 6.62 -39.07 -0.26 -0.03 16 6 O -0.31 0.11 9.36 -18.86 -0.18 -0.07 16 7 C 0.02 -0.08 9.80 101.05 0.99 0.92 16 8 C -0.19 -0.27 5.28 -104.53 -0.55 -0.82 16 9 C -0.07 -0.01 2.32 36.00 0.08 0.07 16 10 O -0.54 -0.41 12.65 -35.23 -0.45 -0.85 16 11 Si 0.74 -1.03 30.40 -169.99 -5.17 -6.20 16 12 C -0.01 -0.01 8.13 -39.23 -0.32 -0.33 16 13 C -0.20 -0.71 5.89 -104.83 -0.62 -1.33 16 14 C 0.57 2.65 7.23 -12.57 -0.09 2.56 16 15 O -0.50 -4.20 13.86 -16.66 -0.23 -4.43 16 16 N -0.71 -1.15 4.03 -49.02 -0.20 -1.35 16 17 C 0.13 0.29 0.96 -132.15 -0.13 0.16 16 18 C 0.53 2.32 6.60 -10.98 -0.07 2.25 16 19 N -0.85 -1.06 8.83 31.22 0.28 -0.79 16 20 O -0.53 -4.39 16.74 5.56 0.09 -4.30 16 21 C -0.11 -0.35 6.66 -25.91 -0.17 -0.52 16 22 C 0.08 -0.02 5.27 -25.92 -0.14 -0.16 16 23 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 24 O -0.54 0.08 13.09 -35.23 -0.46 -0.38 16 25 C -0.16 0.18 7.20 -25.92 -0.19 -0.01 16 26 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 27 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 28 H 0.11 -0.13 8.14 -51.93 -0.42 -0.56 16 29 H 0.15 -0.21 4.50 -52.48 -0.24 -0.45 16 30 H 0.11 -0.54 8.14 -51.93 -0.42 -0.97 16 31 H 0.06 -0.25 7.65 -51.93 -0.40 -0.65 16 32 H 0.06 -0.23 7.65 -51.93 -0.40 -0.63 16 33 H 0.08 -0.04 7.82 -51.93 -0.41 -0.44 16 34 H 0.37 -0.39 8.59 45.56 0.39 0.00 16 35 H -0.24 0.03 7.11 56.52 0.40 0.43 16 36 H -0.25 0.07 6.80 56.52 0.38 0.45 16 37 H 0.14 0.01 3.25 -52.49 -0.17 -0.16 16 38 H 0.40 -0.25 6.71 -40.82 -0.27 -0.52 16 39 H 0.40 -0.33 8.33 -40.82 -0.34 -0.67 16 40 H 0.40 0.15 8.93 -40.82 -0.36 -0.21 16 41 H 0.09 0.51 7.39 -51.93 -0.38 0.12 16 42 H 0.12 0.42 7.35 -51.93 -0.38 0.04 16 43 H 0.38 -1.69 9.12 45.56 0.42 -1.27 16 44 H 0.11 -0.17 8.10 -51.93 -0.42 -0.59 16 45 H 0.09 -0.27 8.10 -51.93 -0.42 -0.69 16 LS Contribution 371.12 15.07 5.59 5.59 Total: 0.00 -12.22 371.12 -6.77 -18.99 By element: Atomic # 1 Polarization: -3.68 SS G_CDS: -4.66 Total: -8.35 kcal Atomic # 6 Polarization: 4.68 SS G_CDS: -1.04 Total: 3.64 kcal Atomic # 7 Polarization: -2.21 SS G_CDS: 0.08 Total: -2.13 kcal Atomic # 8 Polarization: -9.97 SS G_CDS: -1.57 Total: -11.53 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.17 Total: -6.20 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -12.22 -6.77 -18.99 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12297780.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.188 kcal (2) G-P(sol) polarization free energy of solvation -12.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.174 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds