Wall clock time and date at job start Sun Mar 7 2021 04:57:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21282 * 119.99763 * 2 1 4 4 C 1.50699 * 119.99822 * 179.97438 * 2 1 3 5 5 N 1.46495 * 112.85038 * 323.91174 * 4 2 1 6 6 C 1.34775 * 120.00201 * 293.53259 * 5 4 2 7 7 O 1.21595 * 119.99957 * 354.98314 * 6 5 4 8 8 C 1.47578 * 120.00065 * 174.98417 * 6 5 4 9 9 C 1.40200 * 119.83297 * 0.20796 * 8 6 5 10 10 C 1.36234 * 120.37751 * 180.28351 * 9 8 6 11 11 C 1.39870 * 119.95821 * 359.48878 * 10 9 8 12 12 C 1.40930 * 120.16973 * 0.27881 * 11 10 9 13 13 C 1.38647 * 119.48910 * 359.97438 * 12 11 10 14 14 N 1.37829 * 107.12460 * 179.97438 * 12 11 10 15 15 C 1.36559 * 109.86499 * 359.97438 * 14 12 11 16 16 C 1.34459 * 109.98424 * 0.02562 * 15 14 12 17 17 C 1.50693 * 126.48323 * 180.02562 * 16 15 14 18 18 O 1.42905 * 109.47097 * 254.97859 * 17 16 15 19 19 Si 1.86302 * 109.47410 * 14.97182 * 17 16 15 20 20 C 1.53780 * 113.61103 * 192.71417 * 4 2 1 21 21 C 1.53777 * 87.08204 * 270.80312 * 20 4 2 22 22 H 1.08999 * 113.61492 * 89.20432 * 21 20 4 23 23 O 1.42901 * 113.61318 * 220.02221 * 21 20 4 24 24 C 1.53775 * 87.08054 * 334.56698 * 21 20 4 25 25 H 0.97006 * 120.00122 * 174.96220 * 1 2 3 26 26 H 0.97003 * 120.00489 * 354.96239 * 1 2 3 27 27 H 0.97001 * 120.00226 * 113.53704 * 5 4 2 28 28 H 1.07997 * 119.81302 * 0.07707 * 9 8 6 29 29 H 1.08001 * 120.01872 * 179.76804 * 10 9 8 30 30 H 1.08006 * 120.16489 * 179.97438 * 13 12 11 31 31 H 0.97000 * 125.06501 * 179.97438 * 14 12 11 32 32 H 1.08001 * 125.00827 * 180.02562 * 15 14 12 33 33 H 1.09005 * 109.47395 * 134.97611 * 17 16 15 34 34 H 0.96695 * 114.00004 * 180.02562 * 18 17 16 35 35 H 1.48489 * 110.00282 * 178.68065 * 19 17 16 36 36 H 1.48498 * 110.00259 * 300.00485 * 19 17 16 37 37 H 1.09004 * 113.61732 * 25.35409 * 20 4 2 38 38 H 1.08998 * 113.61214 * 156.25193 * 20 4 2 39 39 H 0.96705 * 114.00453 * 180.02562 * 23 21 20 40 40 H 1.09003 * 113.61859 * 270.88567 * 24 21 20 41 41 H 1.09005 * 113.61589 * 139.98402 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1012 -1.3051 0.0006 5 7 1.4409 -2.3429 0.7962 6 6 1.3416 -2.2059 2.1333 7 8 1.8788 -1.2678 2.6899 8 6 0.5809 -3.1945 2.9219 9 6 -0.0335 -4.2772 2.2771 10 6 -0.7433 -5.1932 2.9935 11 6 -0.8527 -5.0615 4.3817 12 6 -0.2354 -3.9800 5.0414 13 6 0.4806 -3.0495 4.3039 14 7 -0.5127 -4.1124 6.3850 15 6 -1.2749 -5.2260 6.5939 16 6 -1.5154 -5.8443 5.4244 17 6 -2.3169 -7.1049 5.2255 18 8 -1.4313 -8.1975 4.9727 19 14 -3.3135 -7.4558 6.7599 20 6 3.5996 -1.1512 0.3106 21 6 3.8134 -0.9694 -1.2013 22 1 3.7383 0.0666 -1.5315 23 8 4.9814 -1.6265 -1.6973 24 6 2.5203 -1.7772 -1.4016 25 1 -0.4850 -0.8368 -0.0738 26 1 -0.4851 0.8368 0.0738 27 1 1.0751 -3.1287 0.3608 28 1 0.0536 -4.3840 1.2059 29 1 -1.2173 -6.0230 2.4904 30 1 0.9578 -2.2162 4.7982 31 1 -0.2114 -3.5050 7.0787 32 1 -1.6320 -5.5608 7.5566 33 1 -2.9890 -6.9780 4.3767 34 1 -1.8794 -9.0431 4.8343 35 1 -4.1327 -8.6789 6.5648 36 1 -2.4088 -7.6308 7.9243 37 1 3.8355 -0.2618 0.8950 38 1 4.0577 -2.0556 0.7108 39 1 5.1216 -1.5156 -2.6477 40 1 2.6834 -2.8528 -1.4696 41 1 1.8848 -1.3933 -2.1997 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12335838.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:57:55 Heat of formation + Delta-G solvation = -50.357320 kcal Electronic energy + Delta-G solvation = -28230.263396 eV Core-core repulsion = 24078.530300 eV Total energy + Delta-G solvation = -4151.733096 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.125 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.54762 -42.15192 -40.15691 -38.88241 -37.93503 -37.54422 -36.35979 -34.78543 -33.88877 -33.38280 -30.81338 -30.59284 -27.07673 -26.78153 -26.37362 -24.55715 -23.66391 -22.82171 -21.42190 -20.64588 -20.35931 -19.32113 -19.17043 -18.50054 -18.43410 -18.18096 -17.64779 -17.22816 -16.70962 -16.23665 -16.00621 -15.88998 -15.84399 -15.37113 -15.17769 -15.05969 -14.85939 -14.78805 -14.58797 -14.47347 -13.89435 -13.78327 -13.54789 -13.23716 -13.15916 -12.70444 -12.65160 -12.42099 -12.19847 -11.89691 -11.72701 -11.35871 -11.01508 -10.87569 -10.76476 -10.68326 -10.42952 -10.18594 -9.38099 -8.83598 -5.02464 -0.29642 0.35887 1.23409 1.32529 1.40165 1.52094 1.80956 1.87674 1.93205 2.10746 2.37529 2.87577 3.13049 3.24011 3.43014 3.47085 3.54775 3.65261 3.67750 3.71309 3.84946 3.93273 4.03725 4.17726 4.21573 4.34992 4.42944 4.46108 4.54776 4.59622 4.69875 4.80604 4.95682 4.97140 5.13690 5.19042 5.26968 5.39378 5.46641 5.58435 5.74863 5.95706 6.23641 6.34961 6.35475 6.47387 6.66861 7.11972 7.21419 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.846 5.846 2 C 0.539 3.461 3 O -0.525 6.525 4 C 0.128 3.872 5 N -0.715 5.715 6 C 0.564 3.436 7 O -0.519 6.519 8 C -0.123 4.123 9 C -0.114 4.114 10 C -0.071 4.071 11 C -0.061 4.061 12 C 0.082 3.918 13 C -0.053 4.053 14 N -0.583 5.583 15 C 0.081 3.919 16 C -0.164 4.164 17 C -0.038 4.038 18 O -0.537 6.537 19 Si 0.680 3.320 20 C -0.104 4.104 21 C 0.081 3.919 22 H 0.096 0.904 23 O -0.554 6.554 24 C -0.157 4.157 25 H 0.401 0.599 26 H 0.405 0.595 27 H 0.406 0.594 28 H 0.126 0.874 29 H 0.129 0.871 30 H 0.137 0.863 31 H 0.423 0.577 32 H 0.177 0.823 33 H 0.073 0.927 34 H 0.377 0.623 35 H -0.260 1.260 36 H -0.254 1.254 37 H 0.095 0.905 38 H 0.101 0.899 39 H 0.381 0.619 40 H 0.111 0.889 41 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.241 -3.881 -1.500 8.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.410 5.410 2 C 0.321 3.679 3 O -0.399 6.399 4 C 0.038 3.962 5 N -0.371 5.371 6 C 0.352 3.648 7 O -0.395 6.395 8 C -0.128 4.128 9 C -0.134 4.134 10 C -0.090 4.090 11 C -0.066 4.066 12 C -0.024 4.024 13 C -0.074 4.074 14 N -0.185 5.185 15 C -0.048 4.048 16 C -0.172 4.172 17 C -0.148 4.148 18 O -0.344 6.344 19 Si 0.581 3.419 20 C -0.142 4.142 21 C 0.022 3.978 22 H 0.114 0.886 23 O -0.359 6.359 24 C -0.195 4.195 25 H 0.229 0.771 26 H 0.237 0.763 27 H 0.243 0.757 28 H 0.144 0.856 29 H 0.147 0.853 30 H 0.154 0.846 31 H 0.261 0.739 32 H 0.194 0.806 33 H 0.091 0.909 34 H 0.224 0.776 35 H -0.184 1.184 36 H -0.179 1.179 37 H 0.113 0.887 38 H 0.120 0.880 39 H 0.229 0.771 40 H 0.129 0.871 41 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -5.927 -2.774 0.362 6.554 hybrid contribution -0.373 -1.172 -0.977 1.571 sum -6.300 -3.945 -0.615 7.459 Atomic orbital electron populations 1.43707 1.06967 1.13217 1.77092 1.19958 0.82820 0.89995 0.75102 1.90781 1.68150 1.32373 1.48576 1.21501 0.93528 0.86894 0.94310 1.45789 1.61041 1.23494 1.06733 1.18259 0.79755 0.85174 0.81629 1.90855 1.45696 1.32598 1.70326 1.19325 1.03085 0.97311 0.93037 1.20652 0.98871 0.94354 0.99517 1.20161 0.98459 0.98764 0.91585 1.19177 0.99316 0.94712 0.93420 1.18052 1.02128 0.98327 0.83908 1.20080 0.97400 0.97722 0.92206 1.41706 1.45725 1.24452 1.06620 1.21766 0.95555 0.88217 0.99243 1.19501 1.07901 0.98107 0.91660 1.24007 0.95776 0.85536 1.09461 1.86643 1.35698 1.18886 1.93146 0.95241 0.81673 0.87888 0.77102 1.23215 0.90542 1.04987 0.95478 1.23221 0.83546 0.95584 0.95488 0.88585 1.86544 1.44654 1.75984 1.28720 1.24011 0.98930 1.03163 0.93413 0.77064 0.76319 0.75665 0.85643 0.85280 0.84557 0.73892 0.80602 0.90910 0.77550 1.18443 1.17905 0.88666 0.88021 0.77124 0.87104 0.89789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.76 8.78 31.22 0.27 1.03 16 2 C 0.54 1.39 6.61 -10.99 -0.07 1.32 16 3 O -0.52 -3.49 16.21 5.56 0.09 -3.40 16 4 C 0.13 0.08 1.05 -132.16 -0.14 -0.06 16 5 N -0.71 0.67 4.73 -48.94 -0.23 0.44 16 6 C 0.56 1.21 7.41 -12.45 -0.09 1.12 16 7 O -0.52 -3.20 15.35 5.28 0.08 -3.12 16 8 C -0.12 -0.14 5.87 -104.95 -0.62 -0.75 16 9 C -0.11 0.10 9.46 -39.57 -0.37 -0.27 16 10 C -0.07 -0.01 10.03 -39.69 -0.40 -0.41 16 11 C -0.06 -0.09 6.35 -105.05 -0.67 -0.76 16 12 C 0.08 0.10 7.26 -84.00 -0.61 -0.51 16 13 C -0.05 -0.09 9.61 -39.03 -0.37 -0.46 16 14 N -0.58 0.56 6.07 -10.68 -0.06 0.50 16 15 C 0.08 -0.08 10.43 -16.78 -0.17 -0.26 16 16 C -0.16 -0.09 5.61 -102.74 -0.58 -0.67 16 17 C -0.04 0.03 3.05 36.00 0.11 0.14 16 18 O -0.54 -0.35 12.86 -35.23 -0.45 -0.80 16 19 Si 0.68 -1.50 30.79 -169.99 -5.23 -6.73 16 20 C -0.10 -0.29 6.14 -25.92 -0.16 -0.45 16 21 C 0.08 0.08 4.82 -25.92 -0.13 -0.05 16 22 H 0.10 0.13 7.63 -51.93 -0.40 -0.26 16 23 O -0.55 -0.59 13.67 -35.23 -0.48 -1.07 16 24 C -0.16 0.26 7.21 -25.92 -0.19 0.07 16 25 H 0.40 -1.43 8.47 -40.82 -0.35 -1.77 16 26 H 0.41 -0.59 8.93 -40.82 -0.36 -0.96 16 27 H 0.41 -1.66 6.71 -40.82 -0.27 -1.93 16 28 H 0.13 -0.52 6.37 -52.49 -0.33 -0.86 16 29 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 30 H 0.14 0.24 7.62 -52.48 -0.40 -0.16 16 31 H 0.42 -1.57 8.96 -40.82 -0.37 -1.94 16 32 H 0.18 -0.65 6.30 -52.49 -0.33 -0.98 16 33 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 34 H 0.38 -1.26 8.74 45.56 0.40 -0.86 16 35 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 36 H -0.25 -0.10 7.04 56.52 0.40 0.30 16 37 H 0.09 0.51 7.63 -51.93 -0.40 0.11 16 38 H 0.10 0.32 8.14 -51.93 -0.42 -0.11 16 39 H 0.38 -1.26 9.12 45.56 0.42 -0.84 16 40 H 0.11 -0.31 8.14 -51.93 -0.42 -0.74 16 41 H 0.08 -0.24 8.10 -51.93 -0.42 -0.66 16 LS Contribution 350.41 15.07 5.28 5.28 Total: 0.00 -13.45 350.41 -8.89 -22.35 By element: Atomic # 1 Polarization: -8.77 SS G_CDS: -3.70 Total: -12.46 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -4.46 Total: -2.00 kcal Atomic # 7 Polarization: 1.99 SS G_CDS: -0.02 Total: 1.97 kcal Atomic # 8 Polarization: -7.64 SS G_CDS: -0.76 Total: -8.40 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.23 Total: -6.73 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -13.45 -8.89 -22.35 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12335838.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.011 kcal (2) G-P(sol) polarization free energy of solvation -13.454 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.347 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.357 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds