Wall clock time and date at job start Sun Mar 7 2021 04:58:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.34849 * 125.90377 * 2 1 4 4 C 1.40940 * 107.46824 * 180.23389 * 3 2 1 5 5 C 1.50701 * 126.26346 * 179.75359 * 4 3 2 6 6 O 1.42907 * 109.47014 * 254.99734 * 5 4 3 7 7 Si 1.86296 * 109.47341 * 15.00328 * 5 4 3 8 8 C 1.34848 * 107.46646 * 359.75569 * 4 3 2 9 9 C 1.50703 * 125.89749 * 180.02562 * 8 4 3 10 10 N 1.36567 * 108.20364 * 359.97438 * 8 4 3 11 11 C 1.40222 * 125.67100 * 179.97438 * 10 8 4 12 12 C 1.38543 * 119.99858 * 114.99420 * 11 10 8 13 13 C 1.39497 * 119.78612 * 179.97438 * 12 11 10 14 14 C 1.47864 * 120.11376 * 180.02562 * 13 12 11 15 15 O 1.21550 * 119.99777 * 359.97438 * 14 13 12 16 16 N 1.34770 * 120.00028 * 179.97438 * 14 13 12 17 17 C 1.46504 * 119.99898 * 175.03378 * 16 14 13 18 18 C 1.50706 * 112.84847 * 67.41958 * 17 16 14 19 19 N 1.34781 * 119.99908 * 34.58009 * 18 17 16 20 20 O 1.21276 * 119.99867 * 214.58455 * 18 17 16 21 21 C 1.53775 * 113.61720 * 296.22336 * 17 16 14 22 22 C 1.53784 * 87.07916 * 270.88036 * 21 17 16 23 23 H 1.09000 * 113.61536 * 220.01455 * 22 21 17 24 24 O 1.42901 * 113.61175 * 89.11739 * 22 21 17 25 25 C 1.53773 * 87.08160 * 334.56786 * 22 21 17 26 26 C 1.39572 * 119.77491 * 0.02562 * 13 12 11 27 27 C 1.38021 * 119.98664 * 0.25158 * 26 13 12 28 28 C 1.38219 * 120.21168 * 359.46648 * 27 26 13 29 29 H 1.09003 * 109.47530 * 270.18211 * 1 2 3 30 30 H 1.09003 * 109.46881 * 30.18161 * 1 2 3 31 31 H 1.09005 * 109.47505 * 150.18049 * 1 2 3 32 32 H 1.08005 * 126.26393 * 359.95538 * 3 2 1 33 33 H 1.09003 * 109.46717 * 135.00248 * 5 4 3 34 34 H 0.96700 * 113.99180 * 60.00615 * 6 5 4 35 35 H 1.48499 * 109.99753 * 179.97438 * 7 5 4 36 36 H 1.48497 * 109.99669 * 301.31584 * 7 5 4 37 37 H 1.08993 * 109.47288 * 269.95693 * 9 8 4 38 38 H 1.09000 * 109.47236 * 29.96112 * 9 8 4 39 39 H 1.09003 * 109.46777 * 149.95585 * 9 8 4 40 40 H 1.08000 * 120.10612 * 359.97438 * 12 11 10 41 41 H 0.96999 * 120.00302 * 355.04224 * 16 14 13 42 42 H 0.96999 * 119.99630 * 355.00744 * 19 18 17 43 43 H 0.96995 * 120.00103 * 175.00826 * 19 18 17 44 44 H 1.08997 * 113.61526 * 25.42742 * 21 17 16 45 45 H 1.09007 * 113.61622 * 156.33691 * 21 17 16 46 46 H 0.96704 * 113.99659 * 179.97438 * 24 22 21 47 47 H 1.09001 * 113.61260 * 270.88211 * 25 22 21 48 48 H 1.08997 * 113.61558 * 139.98157 * 25 22 21 49 49 H 1.08002 * 120.00523 * 179.97438 * 26 13 12 50 50 H 1.08001 * 119.89170 * 179.74815 * 27 26 13 51 51 H 1.07998 * 119.88643 * 180.27445 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0923 0.0000 4 6 3.6348 0.6466 -0.0055 5 6 4.8647 1.5175 -0.0127 6 8 5.4489 1.5059 -1.3168 7 14 4.3933 3.2617 0.4413 8 6 3.6120 -0.7017 -0.0032 9 6 4.8177 -1.6058 -0.0067 10 7 2.3077 -1.1063 0.0042 11 6 1.8642 -2.4366 0.0081 12 6 1.1699 -2.9321 1.0998 13 6 0.7304 -4.2560 1.0988 14 6 -0.0117 -4.7921 2.2599 15 8 -0.2393 -4.0791 3.2176 16 7 -0.4358 -6.0714 2.2563 17 6 -1.0746 -6.6347 3.4484 18 6 -2.4153 -6.0128 3.7430 19 7 -3.2158 -5.6257 2.7301 20 8 -2.7739 -5.8606 4.8915 21 6 -0.1450 -6.7028 4.6714 22 6 0.2773 -8.0955 4.1744 23 1 0.3986 -8.8262 4.9741 24 8 1.3850 -8.0696 3.2720 25 6 -1.0882 -8.1723 3.4715 26 6 0.9935 -5.0728 -0.0019 27 6 1.6910 -4.5712 -1.0821 28 6 2.1212 -3.2577 -1.0830 29 1 -0.3634 0.0033 1.0277 30 1 -0.3633 0.8884 -0.5167 31 1 -0.3634 -0.8916 -0.5110 32 1 1.9670 2.1204 -0.0007 33 1 5.5845 1.1355 0.7113 34 1 4.8632 1.8336 -2.0130 35 1 5.5977 4.1304 0.4383 36 1 3.3883 3.7826 -0.5199 37 1 5.1036 -1.8261 -1.0352 38 1 5.6447 -1.1107 0.5022 39 1 4.5768 -2.5347 0.5104 40 1 0.9697 -2.2954 1.9489 41 1 -0.3180 -6.6192 1.4645 42 1 -2.9002 -5.6802 1.8146 43 1 -4.1075 -5.2926 2.9168 44 1 0.6603 -5.9686 4.6492 45 1 -0.6761 -6.7214 5.6231 46 1 1.6555 -8.9426 2.9562 47 1 -1.8772 -8.5926 4.0952 48 1 -1.0445 -8.6243 2.4807 49 1 0.6553 -6.0985 -0.0065 50 1 1.8972 -5.2058 -1.9313 51 1 2.6627 -2.8693 -1.9330 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12335854.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:03 Heat of formation + Delta-G solvation = -34.261574 kcal Electronic energy + Delta-G solvation = -36620.335197 eV Core-core repulsion = 31874.461067 eV Total energy + Delta-G solvation = -4745.874130 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.86353 -42.34644 -40.68691 -39.33603 -39.05121 -37.68070 -36.25640 -34.87273 -34.55116 -33.72535 -33.60899 -32.33236 -30.44316 -30.12635 -27.34261 -27.16827 -27.04564 -25.15584 -24.62925 -23.72222 -22.48655 -22.06602 -21.04391 -20.43701 -20.35307 -19.18033 -18.91458 -18.10691 -17.96296 -17.46823 -17.44001 -17.35630 -17.09983 -16.60400 -16.15579 -15.92502 -15.86895 -15.75267 -15.35589 -15.18741 -15.12921 -15.00438 -14.81582 -14.69694 -14.25459 -14.09930 -13.97845 -13.91436 -13.68360 -13.52823 -13.41489 -13.30437 -13.23031 -13.15607 -12.93763 -12.65919 -12.54556 -12.49549 -11.97390 -11.93003 -11.53964 -11.35580 -11.23618 -11.07230 -10.69437 -10.53275 -10.35859 -10.28775 -10.07731 -9.48425 -8.74296 -4.74214 -0.52523 -0.13002 1.15718 1.40932 1.52768 1.59036 1.69139 1.81496 1.88276 1.91660 2.16547 2.41165 2.54458 2.84248 3.15705 3.25105 3.33753 3.53656 3.55298 3.61006 3.65145 3.76579 3.79012 3.83796 4.02531 4.06407 4.13487 4.18522 4.34378 4.38393 4.40607 4.43190 4.44373 4.55840 4.63674 4.66069 4.66883 4.71868 4.72619 4.81942 4.87621 4.96311 4.98688 4.99146 5.01181 5.05177 5.20626 5.22353 5.38815 5.44410 5.75853 6.06140 6.17055 6.22735 6.29287 6.46609 6.50587 6.63828 6.97592 7.22675 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.028 3.972 3 C -0.187 4.187 4 C -0.192 4.192 5 C -0.038 4.038 6 O -0.535 6.535 7 Si 0.694 3.306 8 C 0.055 3.945 9 C -0.084 4.084 10 N -0.403 5.403 11 C 0.113 3.887 12 C -0.049 4.049 13 C -0.120 4.120 14 C 0.563 3.437 15 O -0.514 6.514 16 N -0.697 5.697 17 C 0.133 3.867 18 C 0.532 3.468 19 N -0.849 5.849 20 O -0.529 6.529 21 C -0.115 4.115 22 C 0.082 3.918 23 H 0.082 0.918 24 O -0.545 6.545 25 C -0.156 4.156 26 C -0.076 4.076 27 C -0.111 4.111 28 C -0.083 4.083 29 H 0.074 0.926 30 H 0.082 0.918 31 H 0.061 0.939 32 H 0.143 0.857 33 H 0.108 0.892 34 H 0.373 0.627 35 H -0.263 1.263 36 H -0.262 1.262 37 H 0.073 0.927 38 H 0.083 0.917 39 H 0.061 0.939 40 H 0.144 0.856 41 H 0.405 0.595 42 H 0.399 0.601 43 H 0.403 0.597 44 H 0.090 0.910 45 H 0.120 0.880 46 H 0.382 0.618 47 H 0.112 0.888 48 H 0.089 0.911 49 H 0.134 0.866 50 H 0.141 0.859 51 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.757 -7.334 -4.786 8.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.080 4.080 3 C -0.211 4.211 4 C -0.198 4.198 5 C -0.149 4.149 6 O -0.341 6.341 7 Si 0.596 3.404 8 C -0.055 4.055 9 C -0.142 4.142 10 N -0.079 5.079 11 C 0.023 3.977 12 C -0.069 4.069 13 C -0.124 4.124 14 C 0.350 3.650 15 O -0.389 6.389 16 N -0.352 5.352 17 C 0.043 3.957 18 C 0.315 3.685 19 N -0.412 5.412 20 O -0.404 6.404 21 C -0.153 4.153 22 C 0.022 3.978 23 H 0.100 0.900 24 O -0.350 6.350 25 C -0.194 4.194 26 C -0.095 4.095 27 C -0.130 4.130 28 C -0.102 4.102 29 H 0.093 0.907 30 H 0.101 0.899 31 H 0.080 0.920 32 H 0.161 0.839 33 H 0.126 0.874 34 H 0.220 0.780 35 H -0.188 1.188 36 H -0.187 1.187 37 H 0.092 0.908 38 H 0.102 0.898 39 H 0.080 0.920 40 H 0.162 0.838 41 H 0.242 0.758 42 H 0.227 0.773 43 H 0.234 0.766 44 H 0.109 0.891 45 H 0.138 0.862 46 H 0.230 0.770 47 H 0.130 0.870 48 H 0.108 0.892 49 H 0.151 0.849 50 H 0.159 0.841 51 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -1.656 -5.849 -3.065 6.808 hybrid contribution -0.269 -1.019 -2.229 2.465 sum -1.925 -6.868 -5.294 8.883 Atomic orbital electron populations 1.20350 0.87879 1.03189 1.02985 1.20387 0.93448 0.84818 1.09343 1.20624 0.91947 0.97703 1.10819 1.19563 0.94787 0.92563 1.12932 1.24254 0.94579 1.08708 0.87356 1.86567 1.43786 1.87011 1.16705 0.94714 0.80393 0.74475 0.90802 1.20256 0.83744 0.93959 1.07497 1.20330 0.93479 0.97547 1.02803 1.41394 1.05709 1.02710 1.58043 1.17513 1.01191 0.83936 0.95038 1.21279 0.94306 0.94414 0.96864 1.19683 1.02892 0.94519 0.95306 1.18174 0.78587 0.81441 0.86782 1.90877 1.55139 1.57659 1.35211 1.45417 1.61587 1.12583 1.15656 1.21441 0.90714 0.94884 0.88709 1.20383 0.85818 0.77103 0.85233 1.43770 1.19163 1.68397 1.09867 1.90769 1.74732 1.54222 1.20646 1.23324 0.98364 0.96391 0.97229 1.22693 0.84827 0.98520 0.91723 0.90037 1.86525 1.49236 1.34561 1.64684 1.23938 1.00592 0.91363 1.03509 1.21414 0.96342 0.99356 0.92358 1.21050 0.98078 0.94877 0.98965 1.21471 0.98092 0.93890 0.96749 0.90699 0.89922 0.91961 0.83933 0.87388 0.77954 1.18835 1.18652 0.90847 0.89832 0.91961 0.83836 0.75753 0.77343 0.76581 0.89144 0.86164 0.77033 0.86997 0.89244 0.84863 0.84113 0.84721 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.00 9.94 36.00 0.36 0.36 16 2 C 0.03 0.06 6.81 -81.69 -0.56 -0.50 16 3 C -0.19 -0.39 9.27 -39.76 -0.37 -0.76 16 4 C -0.19 -0.44 5.35 -104.80 -0.56 -1.00 16 5 C -0.04 -0.06 2.60 36.01 0.09 0.03 16 6 O -0.53 -1.38 12.88 -35.23 -0.45 -1.83 16 7 Si 0.69 0.59 30.86 -169.99 -5.25 -4.66 16 8 C 0.05 0.13 6.81 -81.68 -0.56 -0.43 16 9 C -0.08 -0.06 9.72 36.01 0.35 0.29 16 10 N -0.40 -0.80 2.79 -52.61 -0.15 -0.95 16 11 C 0.11 0.08 4.65 -83.64 -0.39 -0.30 16 12 C -0.05 -0.06 9.28 -39.00 -0.36 -0.42 16 13 C -0.12 0.03 5.87 -104.99 -0.62 -0.59 16 14 C 0.56 0.69 7.25 -12.32 -0.09 0.60 16 15 O -0.51 -2.84 15.05 5.32 0.08 -2.76 16 16 N -0.70 1.28 3.98 -48.85 -0.19 1.08 16 17 C 0.13 -0.04 0.97 -132.16 -0.13 -0.17 16 18 C 0.53 1.22 6.61 -10.98 -0.07 1.14 16 19 N -0.85 0.78 8.83 31.22 0.28 1.06 16 20 O -0.53 -3.48 16.76 5.56 0.09 -3.39 16 21 C -0.11 -0.14 6.67 -25.92 -0.17 -0.31 16 22 C 0.08 -0.18 5.28 -25.92 -0.14 -0.32 16 23 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 24 O -0.54 1.29 13.09 -35.23 -0.46 0.83 16 25 C -0.16 0.50 7.20 -25.92 -0.19 0.32 16 26 C -0.08 0.23 9.54 -39.16 -0.37 -0.14 16 27 C -0.11 0.34 10.02 -39.67 -0.40 -0.06 16 28 C -0.08 0.09 9.72 -39.32 -0.38 -0.29 16 29 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 30 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.06 -0.01 7.83 -51.93 -0.41 -0.41 16 32 H 0.14 0.13 6.52 -52.48 -0.34 -0.21 16 33 H 0.11 0.10 7.50 -51.93 -0.39 -0.29 16 34 H 0.37 0.03 8.70 45.56 0.40 0.43 16 35 H -0.26 -1.02 7.11 56.52 0.40 -0.62 16 36 H -0.26 -0.70 7.01 56.52 0.40 -0.31 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 38 H 0.08 0.03 7.50 -51.93 -0.39 -0.36 16 39 H 0.06 0.03 7.83 -51.93 -0.41 -0.38 16 40 H 0.14 0.40 7.65 -52.49 -0.40 0.00 16 41 H 0.41 -1.98 6.72 -40.82 -0.27 -2.26 16 42 H 0.40 -1.36 8.29 -40.82 -0.34 -1.70 16 43 H 0.40 -0.59 8.93 -40.82 -0.36 -0.96 16 44 H 0.09 0.32 7.37 -51.93 -0.38 -0.06 16 45 H 0.12 0.23 7.34 -51.93 -0.38 -0.15 16 46 H 0.38 -2.48 9.12 45.56 0.42 -2.07 16 47 H 0.11 -0.35 8.10 -51.93 -0.42 -0.77 16 48 H 0.09 -0.48 8.10 -51.93 -0.42 -0.90 16 49 H 0.13 -0.81 6.41 -52.49 -0.34 -1.15 16 50 H 0.14 -0.75 8.06 -52.49 -0.42 -1.18 16 51 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 LS Contribution 424.51 15.07 6.40 6.40 Total: 0.00 -12.39 424.51 -10.39 -22.77 By element: Atomic # 1 Polarization: -9.83 SS G_CDS: -6.18 Total: -16.01 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -4.55 Total: -2.54 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.07 Total: 1.19 kcal Atomic # 8 Polarization: -6.41 SS G_CDS: -0.74 Total: -7.15 kcal Atomic # 14 Polarization: 0.59 SS G_CDS: -5.25 Total: -4.66 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -12.39 -10.39 -22.77 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12335854.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.490 kcal (2) G-P(sol) polarization free energy of solvation -12.387 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.876 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.772 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.262 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds