Wall clock time and date at job start Sun Mar 7 2021 04:58:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21278 * 119.99924 * 2 1 4 4 C 1.50698 * 119.99756 * 180.02562 * 2 1 3 5 5 N 1.46500 * 112.84963 * 323.90698 * 4 2 1 6 6 C 1.34779 * 120.00357 * 293.73458 * 5 4 2 7 7 O 1.21554 * 119.99784 * 354.97879 * 6 5 4 8 8 C 1.47848 * 120.00024 * 174.97239 * 6 5 4 9 9 C 1.39563 * 120.13759 * 180.02562 * 8 6 5 10 10 C 1.37975 * 119.87290 * 179.97438 * 9 8 6 11 11 C 1.50700 * 119.92269 * 179.97438 * 10 9 8 12 12 O 1.42898 * 109.47574 * 299.98268 * 11 10 9 13 13 Si 1.86306 * 109.47079 * 179.97438 * 11 10 9 14 14 C 1.38322 * 120.15896 * 359.97438 * 10 9 8 15 15 C 1.38467 * 120.27951 * 0.02562 * 14 10 9 16 16 Br 1.89102 * 119.93842 * 179.97438 * 15 14 10 17 17 C 1.38034 * 120.12509 * 0.02562 * 15 14 10 18 18 C 1.53781 * 113.61057 * 192.71834 * 4 2 1 19 19 C 1.53781 * 87.07823 * 270.79511 * 18 4 2 20 20 H 1.09007 * 113.61354 * 89.12076 * 19 18 4 21 21 O 1.42900 * 113.61212 * 220.01784 * 19 18 4 22 22 C 1.53776 * 113.69363 * 95.17885 * 4 2 1 23 23 H 0.96998 * 120.00098 * 174.97272 * 1 2 3 24 24 H 0.97008 * 120.00093 * 354.95950 * 1 2 3 25 25 H 0.96998 * 119.99896 * 113.73329 * 5 4 2 26 26 H 1.08001 * 120.06460 * 359.95389 * 9 8 6 27 27 H 1.08998 * 109.46956 * 59.98229 * 11 10 9 28 28 H 0.96701 * 113.99770 * 300.00365 * 12 11 10 29 29 H 1.48506 * 109.99824 * 180.02562 * 13 11 10 30 30 H 1.48501 * 109.99843 * 301.32074 * 13 11 10 31 31 H 1.07997 * 119.86179 * 179.74175 * 14 10 9 32 32 H 1.08003 * 120.07607 * 180.02562 * 17 15 14 33 33 H 1.08995 * 113.61579 * 25.34207 * 18 4 2 34 34 H 1.09003 * 113.61333 * 156.25021 * 18 4 2 35 35 H 0.96705 * 113.99587 * 179.97438 * 21 19 18 36 36 H 1.09000 * 113.61643 * 203.67021 * 22 4 2 37 37 H 1.08993 * 113.61773 * 334.58227 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 7 1.4408 -2.3436 0.7943 6 6 1.3380 -2.2058 2.1310 7 8 1.8721 -1.2666 2.6881 8 6 0.5757 -3.1970 2.9199 9 6 0.4669 -3.0568 4.3042 10 6 -0.2463 -3.9847 5.0350 11 6 -0.3640 -3.8348 6.5299 12 8 0.9393 -3.8612 7.1154 13 14 -1.3819 -5.2361 7.2163 14 6 -0.8537 -5.0523 4.3987 15 6 -0.7500 -5.1976 3.0256 16 35 -1.5835 -6.6611 2.1658 17 6 -0.0384 -4.2767 2.2833 18 6 3.5995 -1.1515 0.3097 19 6 3.8134 -0.9685 -1.2021 20 1 3.7368 0.0677 -1.5317 21 8 4.9815 -1.6252 -1.6986 22 6 2.5202 -1.7761 -1.4032 23 1 -0.4850 -0.8368 -0.0736 24 1 -0.4851 0.8369 0.0738 25 1 1.0775 -3.1303 0.3584 26 1 0.9404 -2.2238 4.8025 27 1 -0.8478 -2.8863 6.7629 28 1 1.4291 -4.6780 6.9482 29 1 -1.5059 -5.0994 8.6899 30 1 -2.7291 -5.2387 6.5917 31 1 -1.4073 -5.7780 4.9759 32 1 0.0417 -4.3906 1.2123 33 1 3.8354 -0.2626 0.8947 34 1 4.0577 -2.0563 0.7091 35 1 5.1211 -1.5141 -2.6490 36 1 2.6834 -2.8516 -1.4720 37 1 1.8849 -1.3914 -2.2009 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_12335870.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:10 Heat of formation + Delta-G solvation = -91.041990 kcal Electronic energy + Delta-G solvation = -25662.676791 eV Core-core repulsion = 21646.777283 eV Total energy + Delta-G solvation = -4015.899508 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.025 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.47974 -41.19894 -39.77342 -39.02170 -37.70117 -36.53219 -34.95327 -34.34954 -33.61407 -32.69721 -30.44873 -27.31282 -27.08829 -26.81039 -25.04555 -22.99369 -22.81032 -21.54502 -20.52924 -19.46545 -19.08270 -18.44299 -17.93484 -17.73775 -17.52197 -17.06989 -16.66198 -16.39670 -16.10285 -16.04810 -15.76816 -15.53773 -15.16688 -14.97798 -14.69121 -14.35452 -14.14224 -13.80801 -13.58844 -13.38368 -13.25867 -13.05488 -12.65220 -12.21261 -11.98147 -11.94880 -11.87660 -11.60923 -11.42311 -11.20077 -11.01502 -10.84252 -10.61887 -10.43986 -10.19781 -9.91425 -5.06146 -0.55122 -0.16924 0.44054 1.17377 1.22654 1.43714 1.57815 1.73950 1.93392 2.24351 2.43886 3.06469 3.19955 3.24165 3.28507 3.43821 3.52430 3.57854 3.74931 3.81366 3.86279 3.95357 4.11080 4.19820 4.28259 4.46548 4.53274 4.59751 4.73831 4.74871 4.82341 4.86287 4.91344 5.07003 5.15277 5.35351 5.67549 6.16495 6.26605 6.69784 6.83323 6.91729 7.09749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.830 5.830 2 C 0.532 3.468 3 O -0.574 6.574 4 C 0.131 3.869 5 N -0.692 5.692 6 C 0.562 3.438 7 O -0.558 6.558 8 C -0.133 4.133 9 C -0.030 4.030 10 C -0.116 4.116 11 C -0.077 4.077 12 O -0.554 6.554 13 Si 0.773 3.227 14 C -0.060 4.060 15 C -0.098 4.098 16 Br -0.026 7.026 17 C -0.039 4.039 18 C -0.117 4.117 19 C 0.081 3.919 20 H 0.085 0.915 21 O -0.569 6.569 22 C -0.131 4.131 23 H 0.416 0.584 24 H 0.410 0.590 25 H 0.425 0.575 26 H 0.126 0.874 27 H 0.111 0.889 28 H 0.397 0.603 29 H -0.296 1.296 30 H -0.274 1.274 31 H 0.156 0.844 32 H 0.170 0.830 33 H 0.057 0.943 34 H 0.099 0.901 35 H 0.400 0.600 36 H 0.135 0.865 37 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.675 -8.688 -5.422 11.258 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.315 3.685 3 O -0.452 6.452 4 C 0.041 3.959 5 N -0.349 5.349 6 C 0.350 3.650 7 O -0.436 6.436 8 C -0.137 4.137 9 C -0.049 4.049 10 C -0.117 4.117 11 C -0.186 4.186 12 O -0.362 6.362 13 Si 0.677 3.323 14 C -0.079 4.079 15 C -0.177 4.177 16 Br 0.060 6.940 17 C -0.060 4.060 18 C -0.156 4.156 19 C 0.021 3.979 20 H 0.103 0.897 21 O -0.377 6.377 22 C -0.169 4.169 23 H 0.247 0.753 24 H 0.242 0.758 25 H 0.266 0.734 26 H 0.144 0.856 27 H 0.129 0.871 28 H 0.247 0.753 29 H -0.224 1.224 30 H -0.200 1.200 31 H 0.173 0.827 32 H 0.187 0.813 33 H 0.076 0.924 34 H 0.117 0.883 35 H 0.250 0.750 36 H 0.153 0.847 37 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -4.930 -7.810 -4.141 10.122 hybrid contribution -0.356 1.222 -0.320 1.313 sum -5.286 -6.587 -4.460 9.552 Atomic orbital electron populations 1.43609 1.06025 1.14331 1.75377 1.20313 0.83655 0.90031 0.74543 1.90767 1.69269 1.34148 1.50979 1.21390 0.92025 0.86523 0.96011 1.45587 1.59984 1.23626 1.05677 1.18478 0.79389 0.84727 0.82433 1.90880 1.47323 1.34130 1.71231 1.19725 1.02825 0.97087 0.94057 1.21228 0.93799 0.97488 0.92432 1.20303 0.99251 0.95222 0.96957 1.25271 0.92305 1.11132 0.89932 1.86518 1.27958 1.45619 1.76107 0.93843 0.78244 0.83378 0.76810 1.21394 0.96615 0.96594 0.93289 1.21744 1.03696 0.97282 0.95008 1.96883 1.78971 1.39584 1.78537 1.21493 0.92569 0.90506 1.01401 1.23226 0.92489 1.03178 0.96699 1.23091 0.85016 0.95784 0.93965 0.89746 1.86494 1.44768 1.75866 1.30597 1.23952 0.96910 1.04117 0.91905 0.75306 0.75850 0.73380 0.85583 0.87126 0.75291 1.22356 1.19983 0.82672 0.81282 0.92390 0.88254 0.74952 0.84689 0.87564 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 2.63 8.78 -173.54 -1.52 1.10 16 2 C 0.53 2.48 6.60 87.66 0.58 3.05 16 3 O -0.57 -8.38 16.20 -3.02 -0.05 -8.43 16 4 C 0.13 -0.06 1.05 3.38 0.00 -0.06 16 5 N -0.69 3.53 4.73 -426.76 -2.02 1.51 16 6 C 0.56 1.17 7.42 86.79 0.64 1.81 16 7 O -0.56 -7.01 15.39 -3.89 -0.06 -7.07 16 8 C -0.13 0.22 5.87 -20.09 -0.12 0.10 16 9 C -0.03 -0.03 9.15 22.53 0.21 0.18 16 10 C -0.12 0.29 5.38 -19.91 -0.11 0.19 16 11 C -0.08 0.17 2.82 71.24 0.20 0.37 16 12 O -0.55 0.22 12.77 -148.98 -1.90 -1.68 16 13 Si 0.77 -3.46 29.78 68.60 2.04 -1.41 16 14 C -0.06 0.31 8.41 22.34 0.19 0.49 16 15 C -0.10 0.56 6.22 22.28 0.14 0.70 16 16 Br -0.03 0.15 33.69 -20.37 -0.69 -0.54 16 17 C -0.04 0.28 9.27 22.54 0.21 0.49 16 18 C -0.12 -0.67 6.16 31.12 0.19 -0.48 16 19 C 0.08 0.07 4.82 31.12 0.15 0.22 16 20 H 0.08 0.27 7.63 -2.38 -0.02 0.25 16 21 O -0.57 -0.35 13.67 -148.98 -2.04 -2.39 16 22 C -0.13 0.87 7.21 31.12 0.22 1.09 16 23 H 0.42 -4.10 8.47 -92.71 -0.79 -4.88 16 24 H 0.41 -1.51 8.93 -92.70 -0.83 -2.33 16 25 H 0.43 -5.69 6.75 -92.71 -0.63 -6.31 16 26 H 0.13 0.70 7.65 -2.91 -0.02 0.67 16 27 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 28 H 0.40 -3.50 8.70 -74.06 -0.64 -4.15 16 29 H -0.30 -1.06 7.11 99.48 0.71 -0.35 16 30 H -0.27 0.28 7.11 99.48 0.71 0.99 16 31 H 0.16 -1.27 4.86 -2.91 -0.01 -1.29 16 32 H 0.17 -2.39 6.42 -2.91 -0.02 -2.40 16 33 H 0.06 0.77 7.63 -2.39 -0.02 0.75 16 34 H 0.10 0.56 8.14 -2.39 -0.02 0.54 16 35 H 0.40 -3.36 9.12 -74.05 -0.68 -4.04 16 36 H 0.14 -1.47 8.14 -2.39 -0.02 -1.49 16 37 H 0.11 -1.06 8.10 -2.39 -0.02 -1.08 16 Total: 0.00 -29.92 338.13 -6.04 -35.96 By element: Atomic # 1 Polarization: -22.90 SS G_CDS: -2.31 Total: -25.22 kcal Atomic # 6 Polarization: 5.66 SS G_CDS: 2.51 Total: 8.17 kcal Atomic # 7 Polarization: 6.16 SS G_CDS: -3.54 Total: 2.61 kcal Atomic # 8 Polarization: -15.52 SS G_CDS: -4.05 Total: -19.57 kcal Atomic # 14 Polarization: -3.46 SS G_CDS: 2.04 Total: -1.41 kcal Atomic # 35 Polarization: 0.15 SS G_CDS: -0.69 Total: -0.54 kcal Total: -29.92 -6.04 -35.96 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12335870.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.079 kcal (2) G-P(sol) polarization free energy of solvation -29.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.002 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.042 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds