Wall clock time and date at job start Sun Mar 7 2021 04:58:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34769 * 1 3 3 O 1.21278 * 120.00032 * 2 1 4 4 C 1.50704 * 120.00251 * 179.97438 * 2 1 3 5 5 N 1.46505 * 112.84744 * 325.54895 * 4 2 1 6 6 C 1.34782 * 119.99589 * 298.29064 * 5 4 2 7 7 O 1.21693 * 120.00116 * 355.00008 * 6 5 4 8 8 C 1.46425 * 119.99687 * 175.00203 * 6 5 4 9 9 C 1.34809 * 120.00189 * 180.02562 * 8 6 5 10 10 C 1.47203 * 120.00385 * 179.97438 * 9 8 6 11 11 C 1.39840 * 120.17391 * 180.02562 * 10 9 8 12 12 C 1.37887 * 119.82714 * 179.97438 * 11 10 9 13 13 C 1.38398 * 120.17448 * 359.97438 * 12 11 10 14 14 C 1.50695 * 119.83085 * 179.97438 * 13 12 11 15 15 O 1.42902 * 109.46870 * 65.00074 * 14 13 12 16 16 Si 1.86303 * 109.47387 * 185.00163 * 14 13 12 17 17 C 1.38407 * 120.34300 * 0.25462 * 13 12 11 18 18 C 1.37893 * 120.17148 * 359.48962 * 17 13 12 19 19 C 1.53777 * 113.61853 * 194.35037 * 4 2 1 20 20 C 1.54049 * 86.98613 * 219.98227 * 19 4 2 21 21 H 1.08997 * 113.62309 * 139.98019 * 20 19 4 22 22 O 1.42902 * 113.68781 * 270.87267 * 20 19 4 23 23 C 1.53779 * 87.07834 * 25.42934 * 20 19 4 24 24 H 0.97008 * 120.00400 * 175.08536 * 1 2 3 25 25 H 0.97002 * 120.00254 * 355.08394 * 1 2 3 26 26 H 0.97000 * 120.00302 * 118.29212 * 5 4 2 27 27 H 1.08006 * 120.00038 * 359.97438 * 8 6 5 28 28 H 1.07997 * 119.99643 * 0.02562 * 9 8 6 29 29 H 1.08002 * 120.08137 * 359.95645 * 11 10 9 30 30 H 1.08003 * 119.91250 * 180.02562 * 12 11 10 31 31 H 1.09000 * 109.47076 * 305.00106 * 14 13 12 32 32 H 0.96703 * 114.00163 * 179.97438 * 15 14 13 33 33 H 1.48501 * 110.00093 * 178.68485 * 16 14 13 34 34 H 1.48504 * 109.99543 * 300.00023 * 16 14 13 35 35 H 1.07998 * 119.91443 * 179.74319 * 17 13 12 36 36 H 1.07991 * 120.08816 * 180.24945 * 18 17 13 37 37 H 1.09007 * 113.61016 * 334.48530 * 19 4 2 38 38 H 1.08991 * 113.61423 * 105.38329 * 19 4 2 39 39 H 0.96698 * 113.99772 * 277.52827 * 22 20 19 40 40 H 1.09004 * 113.61388 * 220.02492 * 23 20 19 41 41 H 1.09003 * 113.61357 * 89.12016 * 23 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.4216 -2.3541 0.7648 6 6 1.2042 -2.1924 2.0851 7 8 1.6517 -1.2180 2.6607 8 6 0.4296 -3.1892 2.8269 9 6 0.2116 -3.0274 4.1474 10 6 -0.5676 -4.0292 4.8931 11 6 -0.7963 -3.8646 6.2628 12 6 -1.5276 -4.8071 6.9542 13 6 -2.0353 -5.9137 6.2960 14 6 -2.8330 -6.9393 7.0593 15 8 -4.0428 -6.3450 7.5338 16 14 -3.2420 -8.3690 5.9370 17 6 -1.8093 -6.0861 4.9414 18 6 -1.0843 -5.1497 4.2350 19 6 3.5914 -1.1559 0.3497 20 6 3.8689 -2.2059 -0.7429 21 1 4.7523 -1.9884 -1.3433 22 8 3.8402 -3.5525 -0.2656 23 6 2.5525 -1.7565 -1.3985 24 1 -0.4851 -0.8370 -0.0720 25 1 -0.4850 0.8370 0.0720 26 1 1.1281 -3.1649 0.3206 27 1 0.0321 -4.0538 2.3160 28 1 0.6081 -2.1622 4.6580 29 1 -0.4008 -3.0015 6.7778 30 1 -1.7054 -4.6812 8.0120 31 1 -2.2479 -7.2980 7.9061 32 1 -4.6076 -6.9491 8.0350 33 1 -4.0013 -9.4019 6.6865 34 1 -4.0397 -7.8930 4.7784 35 1 -2.2052 -6.9543 4.4356 36 1 -0.9122 -5.2836 3.1774 37 1 3.9969 -0.1702 0.1211 38 1 3.8402 -1.4941 1.3555 39 1 4.6654 -3.8409 0.1478 40 1 1.9631 -2.5793 -1.8031 41 1 2.6744 -0.9347 -2.1042 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12360594.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:18 Heat of formation + Delta-G solvation = -69.769652 kcal Electronic energy + Delta-G solvation = -26112.393235 eV Core-core repulsion = 22153.470408 eV Total energy + Delta-G solvation = -3958.922827 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.130 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.16126 -40.68539 -39.80735 -39.08220 -37.90722 -36.13782 -35.15909 -34.66847 -33.70507 -32.26300 -31.33530 -27.66258 -27.04827 -26.53517 -24.22812 -23.87897 -22.39871 -21.99622 -20.47445 -20.32837 -19.07681 -18.66501 -18.57344 -18.10504 -17.83541 -17.44462 -16.73592 -16.71281 -16.20954 -15.80141 -15.60193 -15.53195 -15.38456 -15.25980 -14.96151 -14.61587 -14.38165 -14.07403 -13.89886 -13.85649 -13.60319 -13.56475 -13.07271 -13.01335 -12.48642 -12.32727 -12.10941 -11.78888 -11.74408 -11.34763 -11.28329 -11.04583 -10.80743 -10.60355 -10.57282 -10.03141 -10.00153 -9.28614 -5.04764 -0.57820 0.34426 0.87659 1.19044 1.51499 1.54166 1.87021 2.01094 2.22001 2.56013 2.72899 2.87882 3.24984 3.29207 3.45146 3.54007 3.63655 3.67132 3.76084 3.83811 3.89704 4.10666 4.12132 4.22265 4.29328 4.32388 4.47384 4.50543 4.54586 4.75927 4.77612 4.85944 4.90474 5.02077 5.04811 5.09313 5.33114 5.38232 5.44022 5.56038 5.83052 5.83803 6.33549 6.34445 6.45391 6.54868 7.19847 7.31487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.849 5.849 2 C 0.533 3.467 3 O -0.532 6.532 4 C 0.133 3.867 5 N -0.698 5.698 6 C 0.549 3.451 7 O -0.530 6.530 8 C -0.215 4.215 9 C -0.011 4.011 10 C -0.074 4.074 11 C -0.091 4.091 12 C -0.094 4.094 13 C -0.060 4.060 14 C -0.080 4.080 15 O -0.535 6.535 16 Si 0.684 3.316 17 C -0.118 4.118 18 C -0.094 4.094 19 C -0.152 4.152 20 C 0.082 3.918 21 H 0.080 0.920 22 O -0.549 6.549 23 C -0.119 4.119 24 H 0.400 0.600 25 H 0.403 0.597 26 H 0.409 0.591 27 H 0.132 0.868 28 H 0.137 0.863 29 H 0.132 0.868 30 H 0.129 0.871 31 H 0.078 0.922 32 H 0.381 0.619 33 H -0.261 1.261 34 H -0.255 1.255 35 H 0.131 0.869 36 H 0.133 0.867 37 H 0.112 0.888 38 H 0.087 0.913 39 H 0.386 0.614 40 H 0.093 0.907 41 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.229 -7.284 -1.643 7.470 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.315 3.685 3 O -0.406 6.406 4 C 0.042 3.958 5 N -0.352 5.352 6 C 0.339 3.661 7 O -0.407 6.407 8 C -0.235 4.235 9 C -0.031 4.031 10 C -0.074 4.074 11 C -0.109 4.109 12 C -0.112 4.112 13 C -0.060 4.060 14 C -0.189 4.189 15 O -0.343 6.343 16 Si 0.585 3.415 17 C -0.135 4.135 18 C -0.112 4.112 19 C -0.191 4.191 20 C 0.022 3.978 21 H 0.098 0.902 22 O -0.355 6.355 23 C -0.157 4.157 24 H 0.228 0.772 25 H 0.234 0.766 26 H 0.246 0.754 27 H 0.150 0.850 28 H 0.155 0.845 29 H 0.150 0.850 30 H 0.147 0.853 31 H 0.096 0.904 32 H 0.229 0.771 33 H -0.186 1.186 34 H -0.179 1.179 35 H 0.148 0.852 36 H 0.151 0.849 37 H 0.130 0.870 38 H 0.105 0.895 39 H 0.234 0.766 40 H 0.111 0.889 41 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -0.350 -5.918 -2.152 6.306 hybrid contribution -1.058 -0.279 0.966 1.460 sum -1.408 -6.197 -1.186 6.464 Atomic orbital electron populations 1.43783 1.07257 1.12976 1.77206 1.20399 0.82730 0.90645 0.74702 1.90756 1.68208 1.32637 1.49017 1.21382 0.93412 0.86123 0.94835 1.45456 1.60375 1.20825 1.08571 1.18390 0.79943 0.86262 0.81546 1.90888 1.50308 1.31274 1.68251 1.22820 1.04226 1.00856 0.95643 1.22407 0.91041 0.96032 0.93626 1.19045 0.99409 0.95211 0.93785 1.21443 0.97330 0.99005 0.93161 1.20974 0.96555 0.93179 1.00525 1.19423 0.97217 0.95859 0.93476 1.24853 0.87756 1.02541 1.03776 1.86593 1.32470 1.40599 1.74610 0.95030 0.89309 0.77169 0.79966 1.20933 0.99760 0.99500 0.93311 1.21327 0.96685 0.93144 1.00024 1.23953 0.92421 1.01467 1.01235 1.22701 0.97753 0.82415 0.94925 0.90242 1.86385 1.41772 1.27186 1.80126 1.23314 0.96591 1.02104 0.93694 0.77233 0.76645 0.75446 0.85028 0.84520 0.85031 0.85317 0.90389 0.77106 1.18585 1.17924 0.85200 0.84946 0.86997 0.89460 0.76598 0.88885 0.86642 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 -0.01 8.78 31.22 0.27 0.26 16 2 C 0.53 1.70 6.48 -10.99 -0.07 1.63 16 3 O -0.53 -3.95 16.76 5.56 0.09 -3.86 16 4 C 0.13 0.08 0.95 -132.16 -0.13 -0.04 16 5 N -0.70 0.67 4.16 -49.29 -0.20 0.47 16 6 C 0.55 0.83 7.30 -12.96 -0.09 0.74 16 7 O -0.53 -3.13 14.95 5.20 0.08 -3.05 16 8 C -0.21 0.15 9.41 -37.50 -0.35 -0.20 16 9 C -0.01 0.00 9.46 -37.16 -0.35 -0.35 16 10 C -0.07 -0.01 5.87 -105.06 -0.62 -0.62 16 11 C -0.09 -0.02 9.80 -39.11 -0.38 -0.40 16 12 C -0.09 -0.05 9.66 -39.65 -0.38 -0.44 16 13 C -0.06 -0.03 5.40 -104.50 -0.56 -0.59 16 14 C -0.08 0.06 2.79 36.00 0.10 0.16 16 15 O -0.54 -0.35 12.81 -35.23 -0.45 -0.80 16 16 Si 0.68 -1.11 29.83 -169.99 -5.07 -6.18 16 17 C -0.12 0.05 8.65 -39.65 -0.34 -0.29 16 18 C -0.09 0.08 9.41 -39.11 -0.37 -0.29 16 19 C -0.15 -0.20 6.72 -25.78 -0.17 -0.38 16 20 C 0.08 -0.11 5.28 -25.78 -0.14 -0.25 16 21 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 22 O -0.55 0.89 13.10 -35.23 -0.46 0.43 16 23 C -0.12 0.20 7.18 -25.92 -0.19 0.02 16 24 H 0.40 -1.04 8.42 -40.82 -0.34 -1.38 16 25 H 0.40 -0.17 8.93 -40.82 -0.36 -0.53 16 26 H 0.41 -1.41 8.62 -40.82 -0.35 -1.77 16 27 H 0.13 -0.47 6.07 -52.48 -0.32 -0.79 16 28 H 0.14 0.14 7.52 -52.49 -0.39 -0.25 16 29 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 30 H 0.13 -0.04 8.06 -52.48 -0.42 -0.46 16 31 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 32 H 0.38 -1.25 8.74 45.56 0.40 -0.85 16 33 H -0.26 -0.14 7.11 56.52 0.40 0.27 16 34 H -0.25 -0.34 7.05 56.52 0.40 0.05 16 35 H 0.13 -0.28 4.84 -52.49 -0.25 -0.53 16 36 H 0.13 -0.44 6.17 -52.49 -0.32 -0.76 16 37 H 0.11 0.28 7.34 -51.93 -0.38 -0.10 16 38 H 0.09 0.25 7.56 -51.93 -0.39 -0.14 16 39 H 0.39 -1.78 9.12 45.56 0.42 -1.36 16 40 H 0.09 -0.28 8.09 -51.93 -0.42 -0.70 16 41 H 0.12 -0.24 8.09 -51.93 -0.42 -0.66 16 LS Contribution 350.61 15.07 5.28 5.28 Total: 0.00 -12.00 350.61 -8.54 -20.54 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -4.03 Total: -11.78 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: -4.05 Total: -1.32 kcal Atomic # 7 Polarization: 0.66 SS G_CDS: 0.07 Total: 0.73 kcal Atomic # 8 Polarization: -6.54 SS G_CDS: -0.74 Total: -7.28 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.07 Total: -6.18 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -12.00 -8.54 -20.54 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12360594.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.226 kcal (2) G-P(sol) polarization free energy of solvation -12.002 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.228 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.543 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds