Wall clock time and date at job start Sun Mar 7 2021 04:58:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34783 * 1 3 3 O 1.21279 * 119.99940 * 2 1 4 4 C 1.50699 * 120.00083 * 180.02562 * 2 1 3 5 5 N 1.46499 * 112.90498 * 335.18472 * 4 2 1 6 6 C 1.34779 * 120.00483 * 284.30019 * 5 4 2 7 7 O 1.21567 * 119.99809 * 5.04634 * 6 5 4 8 8 C 1.47691 * 120.00254 * 185.05098 * 6 5 4 9 9 C 1.39618 * 120.15700 * 359.97438 * 8 6 5 10 10 C 1.38108 * 119.85610 * 179.97438 * 9 8 6 11 11 F 1.35095 * 119.91829 * 180.02562 * 10 9 8 12 12 C 1.38611 * 120.16325 * 359.97438 * 10 9 8 13 13 C 1.50700 * 119.84332 * 180.02562 * 12 10 9 14 14 O 1.42901 * 109.47019 * 75.00745 * 13 12 10 15 15 Si 1.86302 * 109.47367 * 195.00515 * 13 12 10 16 16 C 1.38228 * 120.31457 * 0.03019 * 12 10 9 17 17 C 1.38268 * 120.14843 * 359.69052 * 16 12 10 18 18 F 1.35096 * 120.08703 * 180.29609 * 17 16 12 19 19 C 1.53780 * 113.61142 * 203.94337 * 4 2 1 20 20 C 1.53789 * 87.16974 * 270.83369 * 19 4 2 21 21 H 1.09002 * 113.60851 * 89.16239 * 20 19 4 22 22 O 1.42902 * 113.61678 * 220.06089 * 20 19 4 23 23 C 1.53778 * 113.61948 * 106.43994 * 4 2 1 24 24 H 0.97006 * 119.99661 * 174.94931 * 1 2 3 25 25 H 0.96994 * 119.99870 * 354.94798 * 1 2 3 26 26 H 0.97002 * 119.99864 * 104.29814 * 5 4 2 27 27 H 1.08009 * 120.07090 * 359.97438 * 9 8 6 28 28 H 1.09004 * 109.47452 * 315.00626 * 13 12 10 29 29 H 0.96692 * 114.00231 * 59.99775 * 14 13 12 30 30 H 1.48497 * 110.00297 * 180.02562 * 15 13 12 31 31 H 1.48499 * 110.00013 * 301.32073 * 15 13 12 32 32 H 1.08007 * 119.92946 * 179.97438 * 16 12 10 33 33 H 1.08999 * 113.61732 * 25.42491 * 19 4 2 34 34 H 1.09002 * 113.61685 * 156.24903 * 19 4 2 35 35 H 0.96694 * 113.99685 * 180.02562 * 22 20 19 36 36 H 1.08993 * 113.61595 * 203.66462 * 23 4 2 37 37 H 1.09000 * 113.61027 * 334.48188 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 -0.0006 5 7 1.3257 -2.4116 0.5653 6 6 1.1589 -2.5047 1.8995 7 8 1.5729 -1.6229 2.6268 8 6 0.4733 -3.6780 2.4779 9 6 -0.0038 -4.6924 1.6457 10 6 -0.6435 -5.7871 2.1933 11 9 -1.1052 -6.7696 1.3892 12 6 -0.8120 -5.8807 3.5659 13 6 -1.5105 -7.0787 4.1557 14 8 -0.6337 -8.2065 4.1206 15 14 -1.9839 -6.7150 5.9205 16 6 -0.3424 -4.8804 4.3963 17 6 0.3050 -3.7815 3.8624 18 9 0.7687 -2.8074 4.6756 19 6 3.5246 -1.1948 0.5713 20 6 3.9909 -0.8662 -0.8568 21 1 3.9635 0.1981 -1.0910 22 8 5.2314 -1.4816 -1.2099 23 6 2.7547 -1.6387 -1.3521 24 1 -0.4850 -0.8369 -0.0740 25 1 -0.4850 0.8367 0.0740 26 1 0.9320 -3.0772 -0.0203 27 1 0.1271 -4.6212 0.5759 28 1 -2.4077 -7.2978 3.5767 29 1 0.1871 -8.0821 4.6163 30 1 -2.6731 -7.8889 6.5138 31 1 -0.7728 -6.3836 6.7133 32 1 -0.4775 -4.9595 5.4650 33 1 3.6507 -0.3699 1.2725 34 1 3.9164 -2.1380 0.9523 35 1 5.5300 -1.2782 -2.1068 36 1 2.9365 -2.7034 -1.4982 37 1 2.2584 -1.1732 -2.2036 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_12360598.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:20 Heat of formation + Delta-G solvation = -177.345426 kcal Electronic energy + Delta-G solvation = -28735.535333 eV Core-core repulsion = 24116.803479 eV Total energy + Delta-G solvation = -4618.731854 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.095 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -50.12657 -50.07813 -42.46350 -40.91199 -39.77255 -38.98507 -37.78228 -36.52988 -34.98949 -34.35517 -32.90009 -31.38511 -28.16032 -27.16115 -26.42060 -24.41292 -23.98700 -22.88742 -21.92266 -20.52460 -19.89061 -19.35757 -18.86474 -18.49925 -18.28834 -17.98625 -17.68301 -17.36068 -16.98028 -16.76725 -16.59079 -16.26674 -16.03182 -15.96214 -15.89990 -15.78438 -15.49194 -15.25357 -14.85915 -14.61540 -14.16272 -13.88408 -13.78049 -13.56834 -13.38357 -13.18456 -13.00169 -12.60684 -12.42243 -11.94281 -11.90307 -11.65040 -11.22534 -10.99748 -10.80739 -10.79021 -10.62267 -10.37013 -9.83553 -4.97071 -0.83835 -0.30814 1.15452 1.24426 1.31426 1.53418 1.60821 1.91262 2.15613 2.32310 2.77792 2.81917 3.05997 3.09280 3.20406 3.25070 3.37148 3.43799 3.49260 3.58645 3.75921 3.82467 4.12652 4.17145 4.31415 4.38070 4.52689 4.54487 4.59134 4.69042 4.71480 4.74428 4.79444 4.84471 5.14241 5.37498 5.70544 6.14810 6.25468 6.38151 6.82820 6.87397 7.11883 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.829 5.829 2 C 0.532 3.468 3 O -0.574 6.574 4 C 0.132 3.868 5 N -0.691 5.691 6 C 0.561 3.439 7 O -0.544 6.544 8 C -0.145 4.145 9 C -0.072 4.072 10 C 0.106 3.894 11 F -0.126 7.126 12 C -0.089 4.089 13 C -0.085 4.085 14 O -0.539 6.539 15 Si 0.770 3.230 16 C -0.132 4.132 17 C 0.140 3.860 18 F -0.126 7.126 19 C -0.113 4.113 20 C 0.081 3.919 21 H 0.088 0.912 22 O -0.570 6.570 23 C -0.130 4.130 24 H 0.415 0.585 25 H 0.410 0.590 26 H 0.426 0.574 27 H 0.188 0.812 28 H 0.135 0.865 29 H 0.390 0.610 30 H -0.295 1.295 31 H -0.273 1.273 32 H 0.168 0.832 33 H 0.058 0.942 34 H 0.097 0.903 35 H 0.400 0.600 36 H 0.133 0.867 37 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.709 -3.982 -5.116 8.638 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.392 5.392 2 C 0.315 3.685 3 O -0.452 6.452 4 C 0.042 3.958 5 N -0.349 5.349 6 C 0.348 3.652 7 O -0.421 6.421 8 C -0.149 4.149 9 C -0.091 4.091 10 C 0.086 3.914 11 F -0.104 7.104 12 C -0.091 4.091 13 C -0.194 4.194 14 O -0.348 6.348 15 Si 0.674 3.326 16 C -0.150 4.150 17 C 0.119 3.881 18 F -0.104 7.104 19 C -0.152 4.152 20 C 0.021 3.979 21 H 0.106 0.894 22 O -0.379 6.379 23 C -0.169 4.169 24 H 0.246 0.754 25 H 0.242 0.758 26 H 0.267 0.733 27 H 0.205 0.795 28 H 0.153 0.847 29 H 0.240 0.760 30 H -0.223 1.223 31 H -0.200 1.200 32 H 0.185 0.815 33 H 0.077 0.923 34 H 0.115 0.885 35 H 0.250 0.750 36 H 0.151 0.849 37 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -5.299 -3.482 -3.557 7.271 hybrid contribution 0.575 -0.435 -0.505 0.880 sum -4.724 -3.917 -4.062 7.360 Atomic orbital electron populations 1.43597 1.06079 1.14323 1.75223 1.20312 0.83715 0.89982 0.74518 1.90767 1.69217 1.33952 1.51295 1.21404 0.90242 0.85037 0.99137 1.45545 1.54869 1.28293 1.06161 1.18152 0.78906 0.85361 0.82736 1.90939 1.49669 1.40836 1.60632 1.19678 1.05686 0.97268 0.92265 1.21386 0.95141 0.90223 1.02322 1.17322 0.99192 0.87274 0.87587 1.91582 1.86336 1.60068 1.72457 1.20437 0.99074 0.97185 0.92371 1.25264 0.95794 0.84479 1.13832 1.86658 1.34530 1.37797 1.75802 0.93900 0.82820 0.84630 0.71292 1.21087 0.99419 0.92192 1.02332 1.17819 0.96190 0.86869 0.87184 1.91611 1.85899 1.60861 1.72047 1.23166 0.91806 1.03078 0.97103 1.23163 0.83456 0.96482 0.94787 0.89430 1.86483 1.38605 1.74237 1.38547 1.23956 0.94989 1.04682 0.93224 0.75420 0.75782 0.73254 0.79466 0.84742 0.76042 1.22274 1.19986 0.81464 0.92282 0.88455 0.74957 0.84880 0.87742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 3.13 8.78 -173.53 -1.52 1.61 16 2 C 0.53 1.96 7.01 87.66 0.61 2.57 16 3 O -0.57 -7.46 16.07 -3.03 -0.05 -7.51 16 4 C 0.13 -0.15 1.11 3.38 0.00 -0.15 16 5 N -0.69 4.44 4.37 -426.92 -1.86 2.57 16 6 C 0.56 0.47 7.43 86.74 0.64 1.11 16 7 O -0.54 -6.12 14.36 -3.93 -0.06 -6.17 16 8 C -0.14 0.41 5.88 -20.06 -0.12 0.29 16 9 C -0.07 0.62 9.51 22.57 0.21 0.84 16 10 C 0.11 -0.57 7.23 22.33 0.16 -0.41 16 11 F -0.13 0.32 16.73 44.97 0.75 1.07 16 12 C -0.09 0.47 5.27 -19.78 -0.10 0.36 16 13 C -0.09 0.43 2.44 71.24 0.17 0.61 16 14 O -0.54 0.80 12.88 -148.98 -1.92 -1.12 16 15 Si 0.77 -4.53 30.23 68.60 2.07 -2.46 16 16 C -0.13 0.56 8.62 22.27 0.19 0.76 16 17 C 0.14 0.05 7.28 22.67 0.17 0.21 16 18 F -0.13 -0.91 15.55 44.97 0.70 -0.22 16 19 C -0.11 -0.60 5.79 31.12 0.18 -0.42 16 20 C 0.08 0.09 4.81 31.18 0.15 0.24 16 21 H 0.09 0.32 7.31 -2.39 -0.02 0.30 16 22 O -0.57 -0.56 13.67 -148.98 -2.04 -2.59 16 23 C -0.13 0.83 7.25 31.18 0.23 1.06 16 24 H 0.41 -4.24 8.16 -92.70 -0.76 -5.00 16 25 H 0.41 -1.82 8.93 -92.71 -0.83 -2.65 16 26 H 0.43 -6.47 6.81 -92.71 -0.63 -7.10 16 27 H 0.19 -3.12 6.42 -2.91 -0.02 -3.14 16 28 H 0.13 -0.87 7.89 -2.39 -0.02 -0.89 16 29 H 0.39 -2.93 8.70 -74.06 -0.64 -3.58 16 30 H -0.30 -0.61 7.11 99.48 0.71 0.09 16 31 H -0.27 0.74 6.68 99.48 0.66 1.40 16 32 H 0.17 -1.10 4.83 -2.91 -0.01 -1.12 16 33 H 0.06 0.73 7.86 -2.39 -0.02 0.71 16 34 H 0.10 0.54 8.14 -2.39 -0.02 0.52 16 35 H 0.40 -3.18 9.12 -74.06 -0.68 -3.86 16 36 H 0.13 -1.39 8.14 -2.39 -0.02 -1.41 16 37 H 0.10 -0.97 8.09 -2.39 -0.02 -0.99 16 Total: 0.00 -30.70 326.50 -3.73 -34.43 By element: Atomic # 1 Polarization: -24.39 SS G_CDS: -2.31 Total: -26.70 kcal Atomic # 6 Polarization: 4.57 SS G_CDS: 2.50 Total: 7.08 kcal Atomic # 7 Polarization: 7.57 SS G_CDS: -3.39 Total: 4.18 kcal Atomic # 8 Polarization: -13.33 SS G_CDS: -4.06 Total: -17.39 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 1.45 Total: 0.86 kcal Atomic # 14 Polarization: -4.53 SS G_CDS: 2.07 Total: -2.46 kcal Total: -30.70 -3.73 -34.43 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12360598.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.912 kcal (2) G-P(sol) polarization free energy of solvation -30.704 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.616 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.433 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds