Wall clock time and date at job start Sun Mar 7 2021 04:58:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21282 * 119.99811 * 2 1 4 4 C 1.50700 * 119.99714 * 180.02562 * 2 1 3 5 5 N 1.46498 * 112.85268 * 36.12994 * 4 2 1 6 6 C 1.34772 * 119.99885 * 67.24808 * 5 4 2 7 7 O 1.21564 * 120.00248 * 355.05960 * 6 5 4 8 8 C 1.47721 * 119.99880 * 175.05361 * 6 5 4 9 9 C 1.39639 * 120.11825 * 0.02562 * 8 6 5 10 10 C 1.37859 * 119.87806 * 180.02562 * 9 8 6 11 11 C 1.38632 * 120.11933 * 0.02562 * 10 9 8 12 12 F 1.35101 * 119.88119 * 179.97438 * 11 10 9 13 13 C 1.38679 * 120.24068 * 359.96026 * 11 10 9 14 14 C 1.50696 * 119.94021 * 180.02562 * 13 11 10 15 15 O 1.42900 * 109.47149 * 194.99642 * 14 13 11 16 16 Si 1.86297 * 109.47240 * 314.99699 * 14 13 11 17 17 C 1.37812 * 120.11603 * 0.29097 * 13 11 10 18 18 C 1.53789 * 113.68696 * 264.85667 * 4 2 1 19 19 C 1.53782 * 87.08242 * 220.00877 * 18 4 2 20 20 H 1.09000 * 113.61156 * 139.97700 * 19 18 4 21 21 O 1.42894 * 113.61800 * 270.88803 * 19 18 4 22 22 C 1.53780 * 113.61134 * 167.32755 * 4 2 1 23 23 H 0.96999 * 120.00090 * 174.99942 * 1 2 3 24 24 H 0.97002 * 119.99901 * 355.00843 * 1 2 3 25 25 H 0.97001 * 119.99743 * 247.24787 * 5 4 2 26 26 H 1.07991 * 120.05962 * 0.02562 * 9 8 6 27 27 H 1.08000 * 119.93864 * 180.02562 * 10 9 8 28 28 H 1.09001 * 109.47256 * 74.99645 * 14 13 11 29 29 H 0.96706 * 113.99921 * 60.00134 * 15 14 13 30 30 H 1.48502 * 110.00457 * 179.97438 * 16 14 13 31 31 H 1.48496 * 110.00126 * 301.32065 * 16 14 13 32 32 H 1.08003 * 120.05361 * 179.70625 * 17 13 11 33 33 H 1.08992 * 113.61371 * 334.56354 * 18 4 2 34 34 H 1.09001 * 113.60748 * 105.46387 * 18 4 2 35 35 H 0.96700 * 114.00190 * 277.50072 * 21 19 18 36 36 H 1.08997 * 113.61542 * 254.61249 * 22 4 2 37 37 H 1.09001 * 113.61917 * 25.43161 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1012 -1.3051 -0.0006 5 7 1.4413 -2.3427 -0.7970 6 6 1.3569 -2.2127 -2.1358 7 8 1.7472 -1.1947 -2.6735 8 6 0.7901 -3.3074 -2.9498 9 6 0.3406 -4.4776 -2.3347 10 6 -0.1870 -5.4963 -3.0992 11 6 -0.2712 -5.3606 -4.4763 12 9 -0.7886 -6.3621 -5.2209 13 6 0.1734 -4.2004 -5.0923 14 6 0.0781 -4.0599 -6.5897 15 8 0.8947 -2.9684 -7.0186 16 14 0.6662 -5.6312 -7.3996 17 6 0.7073 -3.1780 -4.3381 18 6 2.5194 -1.7777 1.4019 19 6 3.8517 -2.2159 0.7711 20 1 4.7202 -2.0069 1.3958 21 8 3.8355 -3.5543 0.2708 22 6 3.5997 -1.1511 -0.3096 23 1 -0.4850 -0.8368 -0.0732 24 1 -0.4850 0.8369 0.0731 25 1 1.0653 -3.1231 -0.3608 26 1 0.4062 -4.5844 -1.2621 27 1 -0.5353 -6.4016 -2.6244 28 1 -0.9578 -3.8715 -6.8717 29 1 1.8315 -3.0686 -6.8005 30 1 0.5766 -5.5057 -8.8766 31 1 2.0670 -5.9163 -6.9976 32 1 1.0576 -2.2768 -4.8193 33 1 2.6234 -0.9669 2.1228 34 1 1.9214 -2.6072 1.7794 35 1 3.9933 -4.2285 0.9458 36 1 3.8740 -1.4747 -1.3137 37 1 3.9989 -0.1686 -0.0578 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12496548.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:26 Heat of formation + Delta-G solvation = -127.264601 kcal Electronic energy + Delta-G solvation = -26451.382392 eV Core-core repulsion = 22304.276181 eV Total energy + Delta-G solvation = -4147.106211 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.105 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -50.39834 -42.36989 -40.91046 -39.45612 -39.10984 -37.79536 -36.23578 -34.77641 -34.10804 -32.67300 -31.91505 -27.51375 -27.16448 -26.83831 -24.93288 -23.35994 -22.42092 -21.77335 -20.41875 -19.50711 -19.17686 -18.66542 -18.36341 -17.96925 -17.85165 -17.57029 -17.11686 -16.69875 -16.28321 -16.10663 -15.87545 -15.76692 -15.56072 -15.25366 -15.12498 -14.81191 -14.44994 -14.22700 -14.00314 -13.84340 -13.61170 -13.39082 -13.14660 -12.84170 -12.52537 -12.41865 -11.92698 -11.90664 -11.33454 -11.22292 -11.15912 -10.96528 -10.67076 -10.19548 -10.07375 -9.81948 -4.79350 -0.58383 -0.09432 1.18207 1.43503 1.54745 1.60690 1.83732 1.96694 2.42615 2.55627 2.83707 2.85854 3.09823 3.17352 3.24529 3.27680 3.43090 3.52721 3.58582 3.79757 3.82552 4.00565 4.17281 4.34695 4.41445 4.45182 4.45955 4.66232 4.67923 4.72767 4.75533 4.93419 4.96078 5.00851 5.23206 5.48285 5.78116 6.20144 6.28223 6.32050 6.47330 7.01297 7.24969 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.849 5.849 2 C 0.532 3.468 3 O -0.529 6.529 4 C 0.133 3.867 5 N -0.698 5.698 6 C 0.563 3.437 7 O -0.514 6.514 8 C -0.139 4.139 9 C -0.058 4.058 10 C -0.149 4.149 11 C 0.124 3.876 12 F -0.104 7.104 13 C -0.154 4.154 14 C -0.074 4.074 15 O -0.527 6.527 16 Si 0.676 3.324 17 C -0.023 4.023 18 C -0.156 4.156 19 C 0.082 3.918 20 H 0.081 0.919 21 O -0.545 6.545 22 C -0.115 4.115 23 H 0.399 0.601 24 H 0.403 0.597 25 H 0.405 0.595 26 H 0.138 0.862 27 H 0.150 0.850 28 H 0.128 0.872 29 H 0.378 0.622 30 H -0.248 1.248 31 H -0.256 1.256 32 H 0.153 0.847 33 H 0.111 0.889 34 H 0.089 0.911 35 H 0.382 0.618 36 H 0.090 0.910 37 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.886 -7.194 6.537 10.139 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.314 3.686 3 O -0.404 6.404 4 C 0.043 3.957 5 N -0.353 5.353 6 C 0.351 3.649 7 O -0.390 6.390 8 C -0.142 4.142 9 C -0.076 4.076 10 C -0.168 4.168 11 C 0.104 3.896 12 F -0.083 7.083 13 C -0.155 4.155 14 C -0.183 4.183 15 O -0.333 6.333 16 Si 0.575 3.425 17 C -0.042 4.042 18 C -0.194 4.194 19 C 0.022 3.978 20 H 0.099 0.901 21 O -0.350 6.350 22 C -0.153 4.153 23 H 0.227 0.773 24 H 0.234 0.766 25 H 0.242 0.758 26 H 0.156 0.844 27 H 0.167 0.833 28 H 0.145 0.855 29 H 0.226 0.774 30 H -0.173 1.173 31 H -0.180 1.180 32 H 0.171 0.829 33 H 0.130 0.870 34 H 0.108 0.892 35 H 0.230 0.770 36 H 0.108 0.892 37 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -2.140 -5.725 4.793 7.767 hybrid contribution 0.006 -0.100 0.897 0.903 sum -2.134 -5.825 5.690 8.418 Atomic orbital electron populations 1.43772 1.07232 1.12996 1.77191 1.20389 0.82765 0.90616 0.74799 1.90768 1.68179 1.32557 1.48890 1.21432 0.93781 0.86155 0.94357 1.45421 1.59723 1.23938 1.06226 1.18156 0.78389 0.86720 0.81677 1.90881 1.47287 1.29206 1.71589 1.19892 1.04759 0.95346 0.94199 1.21161 0.94808 0.91537 1.00140 1.21084 1.02895 1.01340 0.91465 1.17653 0.97388 0.85028 0.89540 1.91198 1.83428 1.58909 1.74720 1.20382 1.03210 0.94040 0.97900 1.24945 1.00327 1.01290 0.91723 1.86614 1.22727 1.42288 1.81652 0.94803 0.84545 0.82651 0.80535 1.20973 0.93486 0.98052 0.91714 1.23939 0.98915 1.02786 0.93781 1.22691 0.95835 0.83519 0.95714 0.90068 1.86521 1.94795 1.14810 1.38879 1.23319 0.91547 0.99424 1.01028 0.77306 0.76586 0.75776 0.84387 0.83260 0.85457 0.77357 1.17298 1.17980 0.82909 0.87039 0.89225 0.77037 0.89170 0.86199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.58 8.83 31.22 0.28 0.86 16 2 C 0.53 1.34 6.60 -10.99 -0.07 1.26 16 3 O -0.53 -3.63 16.74 5.56 0.09 -3.54 16 4 C 0.13 -0.02 0.96 -132.16 -0.13 -0.15 16 5 N -0.70 1.21 4.02 -48.89 -0.20 1.02 16 6 C 0.56 0.77 7.25 -12.39 -0.09 0.68 16 7 O -0.51 -2.94 15.05 5.31 0.08 -2.86 16 8 C -0.14 0.03 5.87 -104.96 -0.62 -0.59 16 9 C -0.06 0.18 9.53 -39.20 -0.37 -0.20 16 10 C -0.15 0.43 10.01 -39.57 -0.40 0.03 16 11 C 0.12 -0.15 6.67 -39.27 -0.26 -0.41 16 12 F -0.10 0.16 13.70 2.25 0.03 0.19 16 13 C -0.15 0.01 5.13 -104.62 -0.54 -0.53 16 14 C -0.07 -0.02 2.96 36.00 0.11 0.09 16 15 O -0.53 -0.84 11.64 -35.23 -0.41 -1.25 16 16 Si 0.68 0.12 29.57 -169.99 -5.03 -4.91 16 17 C -0.02 -0.02 8.78 -39.20 -0.34 -0.36 16 18 C -0.16 0.50 7.20 -25.91 -0.19 0.31 16 19 C 0.08 -0.18 5.28 -25.91 -0.14 -0.31 16 20 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 21 O -0.54 1.30 13.09 -35.23 -0.46 0.84 16 22 C -0.11 -0.14 6.66 -25.91 -0.17 -0.32 16 23 H 0.40 -1.30 8.33 -40.82 -0.34 -1.64 16 24 H 0.40 -0.48 8.93 -40.82 -0.36 -0.84 16 25 H 0.41 -1.98 6.72 -40.82 -0.27 -2.26 16 26 H 0.14 -0.87 6.41 -52.49 -0.34 -1.20 16 27 H 0.15 -0.77 8.06 -52.49 -0.42 -1.19 16 28 H 0.13 -0.08 7.96 -51.93 -0.41 -0.49 16 29 H 0.38 -0.40 8.42 45.56 0.38 -0.02 16 30 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 31 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 32 H 0.15 0.30 6.65 -52.48 -0.35 -0.05 16 33 H 0.11 -0.35 8.09 -51.93 -0.42 -0.77 16 34 H 0.09 -0.48 8.10 -51.93 -0.42 -0.90 16 35 H 0.38 -2.49 9.12 45.56 0.42 -2.07 16 36 H 0.09 0.32 7.39 -51.93 -0.38 -0.06 16 37 H 0.12 0.24 7.34 -51.93 -0.38 -0.14 16 LS Contribution 319.43 15.07 4.81 4.81 Total: 0.00 -11.29 319.43 -6.94 -18.22 By element: Atomic # 1 Polarization: -9.96 SS G_CDS: -2.93 Total: -12.89 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: -3.21 Total: -0.49 kcal Atomic # 7 Polarization: 1.80 SS G_CDS: 0.08 Total: 1.87 kcal Atomic # 8 Polarization: -6.12 SS G_CDS: -0.70 Total: -6.81 kcal Atomic # 9 Polarization: 0.16 SS G_CDS: 0.03 Total: 0.19 kcal Atomic # 14 Polarization: 0.12 SS G_CDS: -5.03 Total: -4.91 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -11.29 -6.94 -18.22 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12496548.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.043 kcal (2) G-P(sol) polarization free energy of solvation -11.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.329 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.936 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.222 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds