Wall clock time and date at job start Sun Mar 7 2021 04:58:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21276 * 119.99799 * 2 1 4 4 C 1.50696 * 119.99874 * 179.97438 * 2 1 3 5 5 N 1.46504 * 112.85165 * 324.16425 * 4 2 1 6 6 C 1.34779 * 119.99787 * 285.08245 * 5 4 2 7 7 O 1.21279 * 120.00422 * 4.85596 * 6 5 4 8 8 C 1.50699 * 119.99542 * 184.86297 * 6 5 4 9 9 N 1.46504 * 109.47126 * 179.97438 * 8 6 5 10 10 C 1.35035 * 125.93119 * 124.99840 * 9 8 6 11 11 C 1.35086 * 107.97724 * 179.74217 * 10 9 8 12 12 C 1.50705 * 126.07332 * 180.26565 * 11 10 9 13 13 O 1.42902 * 109.47164 * 103.74875 * 12 11 10 14 14 Si 1.86299 * 109.47228 * 343.74468 * 12 11 10 15 15 C 1.40844 * 107.85153 * 0.25817 * 11 10 9 16 16 C 1.48425 * 126.03985 * 179.97438 * 15 11 10 17 17 C 1.39323 * 120.11686 * 319.31994 * 16 15 11 18 18 C 1.38027 * 119.87365 * 179.76826 * 17 16 15 19 19 C 1.38312 * 120.12211 * 0.48388 * 18 17 16 20 20 C 1.38323 * 120.24130 * 359.78703 * 19 18 17 21 21 C 1.38024 * 120.11983 * 359.96151 * 20 19 18 22 22 N 1.31619 * 107.92167 * 0.02562 * 15 11 10 23 23 C 1.53786 * 113.61229 * 192.97031 * 4 2 1 24 24 C 1.53778 * 87.07891 * 270.79635 * 23 4 2 25 25 H 1.09008 * 113.61260 * 89.11727 * 24 23 4 26 26 O 1.42904 * 113.61740 * 219.93403 * 24 23 4 27 27 C 1.53777 * 113.69084 * 95.43454 * 4 2 1 28 28 H 0.97006 * 120.00152 * 184.98671 * 1 2 3 29 29 H 0.97001 * 120.00172 * 4.99819 * 1 2 3 30 30 H 0.96996 * 119.99750 * 105.07855 * 5 4 2 31 31 H 1.09006 * 109.47279 * 60.00076 * 8 6 5 32 32 H 1.09000 * 109.47587 * 299.99852 * 8 6 5 33 33 H 1.08001 * 126.01240 * 359.97438 * 10 9 8 34 34 H 1.08998 * 109.46830 * 223.74222 * 12 11 10 35 35 H 0.96695 * 114.00275 * 180.02562 * 13 12 11 36 36 H 1.48500 * 109.99994 * 298.68247 * 14 12 11 37 37 H 1.48498 * 109.99764 * 59.99930 * 14 12 11 38 38 H 1.07997 * 120.06351 * 359.97438 * 17 16 15 39 39 H 1.08003 * 119.93748 * 180.24798 * 18 17 16 40 40 H 1.07998 * 119.87953 * 179.76843 * 19 18 17 41 41 H 1.08002 * 119.94111 * 179.97438 * 20 19 18 42 42 H 1.07998 * 120.06126 * 180.02562 * 21 20 19 43 43 H 1.08994 * 113.61555 * 25.35045 * 23 4 2 44 44 H 1.09003 * 113.61272 * 156.16661 * 23 4 2 45 45 H 0.96698 * 114.00000 * 180.02562 * 26 24 23 46 46 H 1.09009 * 113.61253 * 203.67542 * 27 4 2 47 47 H 1.08998 * 113.61761 * 334.57483 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 7 1.4378 -2.3447 0.7915 6 6 1.4814 -2.2979 2.1377 7 8 1.9930 -1.3502 2.6954 8 6 0.8944 -3.4234 2.9501 9 7 1.0669 -3.1376 4.3766 10 6 0.0842 -3.1025 5.3021 11 6 0.6460 -2.8119 6.4958 12 6 -0.0805 -2.6783 7.8094 13 8 0.1437 -3.8481 8.5989 14 14 -1.9060 -2.4834 7.4925 15 6 2.0313 -2.6562 6.2946 16 6 3.0342 -2.3307 7.3391 17 6 2.7383 -1.3903 8.3235 18 6 3.6730 -1.0949 9.2953 19 6 4.9051 -1.7232 9.2871 20 6 5.2062 -2.6536 8.3088 21 6 4.2771 -2.9603 7.3353 22 7 2.2791 -2.8493 5.0164 23 6 3.5984 -1.1519 0.3168 24 6 3.8180 -0.9669 -1.1940 25 1 3.7427 0.0698 -1.5224 26 8 4.9890 -1.6213 -1.6866 27 6 2.5257 -1.7741 -1.4011 28 1 -0.4851 -0.8369 0.0730 29 1 -0.4850 0.8368 -0.0732 30 1 0.9672 -3.0665 0.3462 31 1 1.4041 -4.3546 2.7023 32 1 -0.1676 -3.5192 2.7241 33 1 -0.9656 -3.2796 5.1207 34 1 0.2911 -1.8034 8.3427 35 1 -0.2955 -3.8315 9.4602 36 1 -2.1553 -1.2530 6.6992 37 1 -2.4248 -3.6700 6.7658 38 1 1.7782 -0.8958 8.3282 39 1 3.4431 -0.3690 10.0613 40 1 5.6349 -1.4864 10.0472 41 1 6.1699 -3.1410 8.3068 42 1 4.5130 -3.6872 6.5721 43 1 3.8320 -0.2638 0.9040 44 1 4.0547 -2.0568 0.7181 45 1 5.1327 -1.5083 -2.6361 46 1 2.6890 -2.8497 -1.4707 47 1 1.8933 -1.3885 -2.2007 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12622748.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:29 Heat of formation + Delta-G solvation = 5.864690 kcal Electronic energy + Delta-G solvation = -34290.739022 eV Core-core repulsion = 29636.716605 eV Total energy + Delta-G solvation = -4654.022417 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.152 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.59624 -42.21678 -40.19794 -39.60138 -38.96699 -37.59300 -36.48012 -34.98332 -34.83339 -33.97670 -32.34389 -31.82794 -31.35163 -28.98063 -27.16716 -26.59605 -25.79135 -24.11310 -23.31781 -22.99326 -21.95920 -21.55180 -20.79538 -20.47667 -19.35949 -18.71283 -18.49178 -18.28779 -18.20867 -17.72244 -17.43098 -16.83104 -16.64355 -16.18678 -16.17688 -15.92915 -15.64803 -15.43241 -15.32643 -15.06770 -14.89074 -14.77730 -14.50181 -14.20115 -14.16089 -14.02071 -13.89927 -13.68297 -13.55739 -13.38228 -13.16753 -12.64348 -12.49594 -12.19004 -12.01852 -11.86772 -11.79648 -11.62708 -11.58292 -11.22727 -11.06149 -10.83897 -10.58518 -10.34696 -10.11315 -9.72939 -9.68602 -9.19754 -5.03102 0.26015 0.64817 0.74358 1.07595 1.25024 1.28854 1.34498 1.60202 1.79381 1.82137 1.94338 2.22959 2.97183 3.05168 3.12297 3.18104 3.29511 3.38844 3.52373 3.53325 3.59901 3.71041 3.74675 3.79466 4.01542 4.07694 4.19165 4.20241 4.31976 4.33032 4.37217 4.49326 4.59412 4.68047 4.69928 4.78847 4.83216 4.90103 5.05646 5.10515 5.12812 5.25802 5.38830 5.60782 5.68883 5.73726 5.75799 5.76880 6.03005 6.14035 6.17954 6.59483 6.63877 6.77002 6.86354 7.07636 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.848 5.848 2 C 0.537 3.463 3 O -0.522 6.522 4 C 0.129 3.871 5 N -0.719 5.719 6 C 0.496 3.504 7 O -0.482 6.482 8 C 0.118 3.882 9 N -0.359 5.359 10 C 0.059 3.941 11 C -0.201 4.201 12 C -0.032 4.032 13 O -0.544 6.544 14 Si 0.680 3.320 15 C 0.135 3.865 16 C -0.007 4.007 17 C -0.095 4.095 18 C -0.119 4.119 19 C -0.112 4.112 20 C -0.120 4.120 21 C -0.090 4.090 22 N -0.244 5.244 23 C -0.101 4.101 24 C 0.082 3.918 25 H 0.096 0.904 26 O -0.553 6.553 27 C -0.155 4.155 28 H 0.399 0.601 29 H 0.406 0.594 30 H 0.406 0.594 31 H 0.123 0.877 32 H 0.127 0.873 33 H 0.172 0.828 34 H 0.072 0.928 35 H 0.378 0.622 36 H -0.256 1.256 37 H -0.253 1.253 38 H 0.125 0.875 39 H 0.127 0.873 40 H 0.124 0.876 41 H 0.125 0.875 42 H 0.123 0.877 43 H 0.095 0.905 44 H 0.101 0.899 45 H 0.382 0.618 46 H 0.111 0.889 47 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.308 -4.160 -1.665 8.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.411 5.411 2 C 0.319 3.681 3 O -0.396 6.396 4 C 0.039 3.961 5 N -0.377 5.377 6 C 0.279 3.721 7 O -0.352 6.352 8 C -0.007 4.007 9 N -0.141 5.141 10 C -0.086 4.086 11 C -0.212 4.212 12 C -0.144 4.144 13 O -0.349 6.349 14 Si 0.581 3.419 15 C -0.031 4.031 16 C -0.009 4.009 17 C -0.115 4.115 18 C -0.137 4.137 19 C -0.131 4.131 20 C -0.138 4.138 21 C -0.109 4.109 22 N -0.064 5.064 23 C -0.140 4.140 24 C 0.022 3.978 25 H 0.114 0.886 26 O -0.358 6.358 27 C -0.193 4.193 28 H 0.227 0.773 29 H 0.237 0.763 30 H 0.242 0.758 31 H 0.140 0.860 32 H 0.145 0.855 33 H 0.189 0.811 34 H 0.090 0.910 35 H 0.225 0.775 36 H -0.181 1.181 37 H -0.178 1.178 38 H 0.142 0.858 39 H 0.145 0.855 40 H 0.142 0.858 41 H 0.143 0.857 42 H 0.141 0.859 43 H 0.113 0.887 44 H 0.120 0.880 45 H 0.229 0.771 46 H 0.130 0.870 47 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -5.738 -3.226 -2.854 7.174 hybrid contribution -1.168 -0.323 -0.571 1.340 sum -6.906 -3.549 -3.425 8.486 Atomic orbital electron populations 1.43710 1.06996 1.13129 1.77296 1.20019 0.82814 0.90113 0.75179 1.90797 1.68100 1.32373 1.48300 1.21546 0.93600 0.86521 0.94478 1.45823 1.57636 1.28612 1.05580 1.20681 0.80677 0.88239 0.82455 1.90897 1.41219 1.32892 1.70177 1.21490 1.04105 0.98387 0.76744 1.47781 1.05085 1.55019 1.06231 1.22134 0.94939 1.02265 0.89232 1.19398 0.92914 1.15001 0.93916 1.24018 1.09154 0.90806 0.90398 1.86542 1.76766 1.39244 1.32354 0.95236 0.77250 0.80137 0.89266 1.20642 0.92297 0.99032 0.91162 1.17687 0.92105 0.97834 0.93272 1.21130 0.99589 0.96771 0.93974 1.21066 0.93772 1.00204 0.98702 1.21261 0.96895 0.96386 0.98555 1.21109 0.99421 0.98322 0.94944 1.21178 0.92275 0.99135 0.98338 1.77816 1.02442 1.20533 1.05641 1.23168 0.90091 1.05098 0.95604 1.23208 0.83551 0.95654 0.95387 0.88581 1.86547 1.44337 1.76007 1.28919 1.24006 0.98877 1.03202 0.93232 0.77264 0.76290 0.75769 0.85964 0.85475 0.81082 0.90999 0.77483 1.18080 1.17791 0.85753 0.85545 0.85791 0.85661 0.85876 0.88659 0.88025 0.77052 0.87036 0.89775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 1.32 8.83 31.22 0.28 1.60 16 2 C 0.54 1.15 6.90 -10.99 -0.08 1.08 16 3 O -0.52 -3.46 16.20 5.56 0.09 -3.37 16 4 C 0.13 -0.01 1.08 -132.16 -0.14 -0.15 16 5 N -0.72 2.00 4.63 -47.92 -0.22 1.78 16 6 C 0.50 0.28 7.52 -10.98 -0.08 0.20 16 7 O -0.48 -3.02 14.72 5.56 0.08 -2.94 16 8 C 0.12 -0.23 6.99 -5.19 -0.04 -0.27 16 9 N -0.36 -1.05 3.40 -62.58 -0.21 -1.26 16 10 C 0.06 0.15 9.97 -17.26 -0.17 -0.03 16 11 C -0.20 -0.79 5.37 -104.76 -0.56 -1.35 16 12 C -0.03 -0.03 2.50 36.01 0.09 0.06 16 13 O -0.54 -0.66 12.86 -35.23 -0.45 -1.11 16 14 Si 0.68 -0.76 30.82 -169.99 -5.24 -6.00 16 15 C 0.14 0.79 6.68 -82.78 -0.55 0.24 16 16 C -0.01 -0.04 5.76 -104.89 -0.60 -0.64 16 17 C -0.10 -0.31 8.89 -39.26 -0.35 -0.66 16 18 C -0.12 -0.24 10.03 -39.63 -0.40 -0.64 16 19 C -0.11 -0.23 10.04 -39.52 -0.40 -0.63 16 20 C -0.12 -0.34 10.03 -39.63 -0.40 -0.74 16 21 C -0.09 -0.41 9.78 -39.26 -0.38 -0.79 16 22 N -0.24 -1.55 11.65 33.43 0.39 -1.16 16 23 C -0.10 -0.28 5.84 -25.92 -0.15 -0.43 16 24 C 0.08 0.06 4.82 -25.92 -0.12 -0.06 16 25 H 0.10 0.13 7.62 -51.92 -0.40 -0.26 16 26 O -0.55 -0.54 13.67 -35.23 -0.48 -1.02 16 27 C -0.15 0.34 7.25 -25.92 -0.19 0.15 16 28 H 0.40 -1.83 8.32 -40.82 -0.34 -2.17 16 29 H 0.41 -0.81 8.93 -40.82 -0.36 -1.17 16 30 H 0.41 -2.82 8.76 -40.82 -0.36 -3.18 16 31 H 0.12 -0.50 8.14 -51.93 -0.42 -0.92 16 32 H 0.13 -0.80 8.07 -51.93 -0.42 -1.22 16 33 H 0.17 -0.07 6.37 -52.49 -0.33 -0.41 16 34 H 0.07 0.00 5.36 -51.93 -0.28 -0.28 16 35 H 0.38 -1.47 8.74 45.56 0.40 -1.08 16 36 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 37 H -0.25 -0.22 7.02 56.52 0.40 0.17 16 38 H 0.12 0.22 5.99 -52.49 -0.31 -0.10 16 39 H 0.13 -0.05 8.06 -52.48 -0.42 -0.47 16 40 H 0.12 -0.02 8.06 -52.49 -0.42 -0.44 16 41 H 0.13 0.10 8.06 -52.49 -0.42 -0.32 16 42 H 0.12 0.53 8.06 -52.49 -0.42 0.10 16 43 H 0.09 0.56 7.64 -51.93 -0.40 0.16 16 44 H 0.10 0.33 8.14 -51.93 -0.42 -0.09 16 45 H 0.38 -1.30 9.12 45.56 0.42 -0.89 16 46 H 0.11 -0.38 8.14 -51.92 -0.42 -0.81 16 47 H 0.08 -0.28 8.10 -51.93 -0.42 -0.70 16 LS Contribution 400.02 15.07 6.03 6.03 Total: 0.00 -16.98 400.02 -9.24 -26.22 By element: Atomic # 1 Polarization: -9.11 SS G_CDS: -4.97 Total: -14.08 kcal Atomic # 6 Polarization: -0.13 SS G_CDS: -4.53 Total: -4.66 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: 0.23 Total: 0.95 kcal Atomic # 8 Polarization: -7.69 SS G_CDS: -0.76 Total: -8.45 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.24 Total: -6.00 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -16.98 -9.24 -26.22 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12622748.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.080 kcal (2) G-P(sol) polarization free energy of solvation -16.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.239 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.216 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.865 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds