Wall clock time and date at job start Sun Mar 7 2021 04:58:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21276 * 119.99799 * 2 1 4 4 C 1.50696 * 119.99874 * 179.97438 * 2 1 3 5 5 N 1.46504 * 112.85165 * 324.16425 * 4 2 1 6 6 C 1.34779 * 119.99787 * 285.08245 * 5 4 2 7 7 O 1.21279 * 120.00422 * 4.85596 * 6 5 4 8 8 C 1.50699 * 119.99542 * 184.86297 * 6 5 4 9 9 N 1.46504 * 109.47126 * 179.97438 * 8 6 5 10 10 C 1.35035 * 125.93119 * 124.99840 * 9 8 6 11 11 C 1.35086 * 107.97724 * 179.74217 * 10 9 8 12 12 C 1.50705 * 126.07332 * 180.26565 * 11 10 9 13 13 O 1.42902 * 109.47164 * 103.74875 * 12 11 10 14 14 Si 1.86299 * 109.47228 * 343.74468 * 12 11 10 15 15 C 1.40844 * 107.85153 * 0.25817 * 11 10 9 16 16 C 1.48425 * 126.03985 * 179.97438 * 15 11 10 17 17 C 1.39323 * 120.11686 * 319.31994 * 16 15 11 18 18 C 1.38027 * 119.87365 * 179.76826 * 17 16 15 19 19 C 1.38312 * 120.12211 * 0.48388 * 18 17 16 20 20 C 1.38323 * 120.24130 * 359.78703 * 19 18 17 21 21 C 1.38024 * 120.11983 * 359.96151 * 20 19 18 22 22 N 1.31619 * 107.92167 * 0.02562 * 15 11 10 23 23 C 1.53786 * 113.61229 * 192.97031 * 4 2 1 24 24 C 1.53778 * 87.07891 * 270.79635 * 23 4 2 25 25 H 1.09008 * 113.61260 * 89.11727 * 24 23 4 26 26 O 1.42904 * 113.61740 * 219.93403 * 24 23 4 27 27 C 1.53777 * 113.69084 * 95.43454 * 4 2 1 28 28 H 0.97006 * 120.00152 * 184.98671 * 1 2 3 29 29 H 0.97001 * 120.00172 * 4.99819 * 1 2 3 30 30 H 0.96996 * 119.99750 * 105.07855 * 5 4 2 31 31 H 1.09006 * 109.47279 * 60.00076 * 8 6 5 32 32 H 1.09000 * 109.47587 * 299.99852 * 8 6 5 33 33 H 1.08001 * 126.01240 * 359.97438 * 10 9 8 34 34 H 1.08998 * 109.46830 * 223.74222 * 12 11 10 35 35 H 0.96695 * 114.00275 * 180.02562 * 13 12 11 36 36 H 1.48500 * 109.99994 * 298.68247 * 14 12 11 37 37 H 1.48498 * 109.99764 * 59.99930 * 14 12 11 38 38 H 1.07997 * 120.06351 * 359.97438 * 17 16 15 39 39 H 1.08003 * 119.93748 * 180.24798 * 18 17 16 40 40 H 1.07998 * 119.87953 * 179.76843 * 19 18 17 41 41 H 1.08002 * 119.94111 * 179.97438 * 20 19 18 42 42 H 1.07998 * 120.06126 * 180.02562 * 21 20 19 43 43 H 1.08994 * 113.61555 * 25.35045 * 23 4 2 44 44 H 1.09003 * 113.61272 * 156.16661 * 23 4 2 45 45 H 0.96698 * 114.00000 * 180.02562 * 26 24 23 46 46 H 1.09009 * 113.61253 * 203.67542 * 27 4 2 47 47 H 1.08998 * 113.61761 * 334.57483 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 7 1.4378 -2.3447 0.7915 6 6 1.4814 -2.2979 2.1377 7 8 1.9930 -1.3502 2.6954 8 6 0.8944 -3.4234 2.9501 9 7 1.0669 -3.1376 4.3766 10 6 0.0842 -3.1025 5.3021 11 6 0.6460 -2.8119 6.4958 12 6 -0.0805 -2.6783 7.8094 13 8 0.1437 -3.8481 8.5989 14 14 -1.9060 -2.4834 7.4925 15 6 2.0313 -2.6562 6.2946 16 6 3.0342 -2.3307 7.3391 17 6 2.7383 -1.3903 8.3235 18 6 3.6730 -1.0949 9.2953 19 6 4.9051 -1.7232 9.2871 20 6 5.2062 -2.6536 8.3088 21 6 4.2771 -2.9603 7.3353 22 7 2.2791 -2.8493 5.0164 23 6 3.5984 -1.1519 0.3168 24 6 3.8180 -0.9669 -1.1940 25 1 3.7427 0.0698 -1.5224 26 8 4.9890 -1.6213 -1.6866 27 6 2.5257 -1.7741 -1.4011 28 1 -0.4851 -0.8369 0.0730 29 1 -0.4850 0.8368 -0.0732 30 1 0.9672 -3.0665 0.3462 31 1 1.4041 -4.3546 2.7023 32 1 -0.1676 -3.5192 2.7241 33 1 -0.9656 -3.2796 5.1207 34 1 0.2911 -1.8034 8.3427 35 1 -0.2955 -3.8315 9.4602 36 1 -2.1553 -1.2530 6.6992 37 1 -2.4248 -3.6700 6.7658 38 1 1.7782 -0.8958 8.3282 39 1 3.4431 -0.3690 10.0613 40 1 5.6349 -1.4864 10.0472 41 1 6.1699 -3.1410 8.3068 42 1 4.5130 -3.6872 6.5721 43 1 3.8320 -0.2638 0.9040 44 1 4.0547 -2.0568 0.7181 45 1 5.1327 -1.5083 -2.6361 46 1 2.6890 -2.8497 -1.4707 47 1 1.8933 -1.3885 -2.2007 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_12622748.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:28 Heat of formation + Delta-G solvation = -9.175605 kcal Electronic energy + Delta-G solvation = -34291.391218 eV Core-core repulsion = 29636.716605 eV Total energy + Delta-G solvation = -4654.674613 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.152 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -42.71515 -42.32761 -40.33474 -39.78742 -39.09145 -37.61599 -36.56763 -35.06694 -34.92930 -34.04259 -32.49109 -31.98568 -31.52966 -29.04931 -27.22354 -26.64586 -25.88613 -24.28211 -23.50488 -23.08749 -22.02692 -21.67756 -20.95796 -20.55782 -19.39657 -18.72915 -18.53549 -18.33253 -18.24496 -17.81844 -17.54705 -16.88808 -16.68246 -16.33234 -16.28117 -16.06957 -15.78890 -15.55221 -15.44293 -15.18789 -14.96984 -14.87148 -14.61553 -14.37106 -14.29584 -14.02624 -13.87756 -13.67559 -13.66073 -13.49234 -13.32735 -12.69250 -12.63319 -12.31074 -12.17684 -11.96653 -11.91997 -11.77346 -11.72376 -11.35333 -11.09532 -10.92072 -10.75197 -10.41260 -10.13104 -9.93347 -9.88970 -9.38933 -4.92616 0.03308 0.42813 0.61303 1.06532 1.21256 1.25522 1.35779 1.53883 1.73653 1.79197 1.98269 2.20637 2.84619 2.98597 3.12912 3.17044 3.30670 3.42297 3.44221 3.52195 3.71292 3.76368 3.81478 3.89633 3.98972 4.01654 4.05217 4.09296 4.22381 4.26963 4.44097 4.45282 4.51357 4.52385 4.67152 4.68264 4.74132 4.80579 4.82039 4.91794 5.07485 5.10007 5.19603 5.50723 5.53729 5.54673 5.62622 5.70949 5.99980 6.14327 6.25566 6.42580 6.76468 6.95331 7.01214 7.05154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.828 5.828 2 C 0.530 3.470 3 O -0.578 6.578 4 C 0.135 3.865 5 N -0.693 5.693 6 C 0.495 3.505 7 O -0.547 6.547 8 C 0.110 3.890 9 N -0.359 5.359 10 C 0.059 3.941 11 C -0.228 4.228 12 C -0.050 4.050 13 O -0.565 6.565 14 Si 0.783 3.217 15 C 0.110 3.890 16 C -0.029 4.029 17 C -0.106 4.106 18 C -0.119 4.119 19 C -0.116 4.116 20 C -0.126 4.126 21 C -0.113 4.113 22 N -0.288 5.288 23 C -0.115 4.115 24 C 0.080 3.920 25 H 0.084 0.916 26 O -0.570 6.570 27 C -0.126 4.126 28 H 0.417 0.583 29 H 0.410 0.590 30 H 0.432 0.568 31 H 0.148 0.852 32 H 0.181 0.819 33 H 0.202 0.798 34 H 0.075 0.925 35 H 0.398 0.602 36 H -0.293 1.293 37 H -0.273 1.273 38 H 0.134 0.866 39 H 0.154 0.846 40 H 0.150 0.850 41 H 0.142 0.858 42 H 0.111 0.889 43 H 0.049 0.951 44 H 0.092 0.908 45 H 0.400 0.600 46 H 0.135 0.865 47 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.751 -5.737 -2.092 11.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.391 5.391 2 C 0.312 3.688 3 O -0.456 6.456 4 C 0.044 3.956 5 N -0.352 5.352 6 C 0.281 3.719 7 O -0.422 6.422 8 C -0.014 4.014 9 N -0.141 5.141 10 C -0.087 4.087 11 C -0.239 4.239 12 C -0.160 4.160 13 O -0.373 6.373 14 Si 0.686 3.314 15 C -0.055 4.055 16 C -0.031 4.031 17 C -0.125 4.125 18 C -0.137 4.137 19 C -0.134 4.134 20 C -0.144 4.144 21 C -0.133 4.133 22 N -0.109 5.109 23 C -0.154 4.154 24 C 0.020 3.980 25 H 0.102 0.898 26 O -0.378 6.378 27 C -0.164 4.164 28 H 0.248 0.752 29 H 0.242 0.758 30 H 0.273 0.727 31 H 0.166 0.834 32 H 0.198 0.802 33 H 0.219 0.781 34 H 0.093 0.907 35 H 0.248 0.752 36 H -0.220 1.220 37 H -0.200 1.200 38 H 0.152 0.848 39 H 0.171 0.829 40 H 0.168 0.832 41 H 0.160 0.840 42 H 0.129 0.871 43 H 0.068 0.932 44 H 0.110 0.890 45 H 0.251 0.749 46 H 0.153 0.847 47 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges -8.221 -4.885 -3.305 10.118 hybrid contribution -0.363 0.178 -0.461 0.613 sum -8.584 -4.707 -3.766 10.489 Atomic orbital electron populations 1.43570 1.05860 1.14359 1.75352 1.20407 0.83784 0.90099 0.74482 1.90771 1.69394 1.34367 1.51080 1.21309 0.91667 0.86562 0.96016 1.45552 1.56683 1.28415 1.04542 1.21206 0.79562 0.87940 0.83227 1.90896 1.44159 1.35554 1.71542 1.22046 1.07510 0.97787 0.74007 1.48121 1.04154 1.54007 1.07830 1.22616 0.96004 1.01200 0.88835 1.19907 0.92537 1.15570 0.95871 1.24413 1.11297 0.90760 0.89491 1.86488 1.77650 1.39419 1.33789 0.94025 0.73505 0.76551 0.87281 1.20965 0.93612 0.99618 0.91292 1.17974 0.92438 0.98709 0.94017 1.21341 1.00496 0.96622 0.94034 1.21431 0.93380 1.00196 0.98658 1.21611 0.97483 0.95690 0.98662 1.21369 0.99729 0.98632 0.94692 1.21248 0.93064 0.99852 0.99096 1.77705 1.04834 1.21968 1.06412 1.23126 0.93031 1.02536 0.96665 1.23115 0.85210 0.95885 0.93780 0.89840 1.86498 1.44634 1.75928 1.30784 1.23902 0.96491 1.03988 0.92002 0.75197 0.75848 0.72682 0.83436 0.80184 0.78137 0.90720 0.75179 1.22048 1.19956 0.84843 0.82865 0.83232 0.84048 0.87052 0.93214 0.88996 0.74900 0.84710 0.87476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 2.94 8.83 -173.54 -1.53 1.41 16 2 C 0.53 2.84 6.90 87.66 0.60 3.45 16 3 O -0.58 -9.38 16.20 -3.02 -0.05 -9.43 16 4 C 0.14 0.03 1.08 3.38 0.00 0.04 16 5 N -0.69 4.54 4.63 -423.92 -1.96 2.57 16 6 C 0.50 0.69 7.52 87.66 0.66 1.35 16 7 O -0.55 -8.32 14.72 -3.03 -0.04 -8.36 16 8 C 0.11 -0.56 6.99 85.63 0.60 0.04 16 9 N -0.36 -2.32 3.40 -351.90 -1.20 -3.52 16 10 C 0.06 0.30 9.97 83.47 0.83 1.13 16 11 C -0.23 -2.09 5.37 -19.95 -0.11 -2.20 16 12 C -0.05 -0.13 2.50 71.24 0.18 0.05 16 13 O -0.56 -1.58 12.86 -148.98 -1.92 -3.49 16 14 Si 0.78 -2.45 30.82 68.60 2.11 -0.33 16 15 C 0.11 1.60 6.68 42.53 0.28 1.88 16 16 C -0.03 -0.39 5.76 -20.04 -0.12 -0.50 16 17 C -0.11 -0.88 8.89 22.48 0.20 -0.68 16 18 C -0.12 -0.52 10.03 22.24 0.22 -0.30 16 19 C -0.12 -0.50 10.04 22.31 0.22 -0.28 16 20 C -0.13 -0.92 10.03 22.24 0.22 -0.69 16 21 C -0.11 -1.38 9.78 22.48 0.22 -1.16 16 22 N -0.29 -4.46 11.65 -48.16 -0.56 -5.02 16 23 C -0.11 -0.97 5.84 31.12 0.18 -0.79 16 24 C 0.08 0.23 4.82 31.12 0.15 0.38 16 25 H 0.08 0.43 7.62 -2.38 -0.02 0.41 16 26 O -0.57 -1.52 13.67 -148.98 -2.04 -3.56 16 27 C -0.13 0.72 7.25 31.12 0.23 0.95 16 28 H 0.42 -4.59 8.32 -92.70 -0.77 -5.36 16 29 H 0.41 -1.70 8.93 -92.71 -0.83 -2.52 16 30 H 0.43 -7.32 8.76 -92.71 -0.81 -8.14 16 31 H 0.15 -1.48 8.14 -2.38 -0.02 -1.50 16 32 H 0.18 -2.95 8.07 -2.39 -0.02 -2.96 16 33 H 0.20 -0.48 6.37 -2.91 -0.02 -0.50 16 34 H 0.08 0.06 5.36 -2.39 -0.01 0.05 16 35 H 0.40 -3.19 8.74 -74.06 -0.65 -3.84 16 36 H -0.29 -0.86 7.11 99.48 0.71 -0.16 16 37 H -0.27 -0.02 7.02 99.48 0.70 0.68 16 38 H 0.13 0.69 5.99 -2.91 -0.02 0.68 16 39 H 0.15 -0.26 8.06 -2.91 -0.02 -0.28 16 40 H 0.15 -0.20 8.06 -2.91 -0.02 -0.22 16 41 H 0.14 0.39 8.06 -2.91 -0.02 0.37 16 42 H 0.11 1.44 8.06 -2.91 -0.02 1.42 16 43 H 0.05 0.86 7.64 -2.39 -0.02 0.84 16 44 H 0.09 0.88 8.14 -2.39 -0.02 0.86 16 45 H 0.40 -2.71 9.12 -74.06 -0.68 -3.39 16 46 H 0.13 -1.33 8.14 -2.38 -0.02 -1.35 16 47 H 0.11 -1.00 8.10 -2.39 -0.02 -1.02 16 Total: 0.00 -47.82 400.02 -5.21 -53.03 By element: Atomic # 1 Polarization: -23.36 SS G_CDS: -2.61 Total: -25.96 kcal Atomic # 6 Polarization: -1.92 SS G_CDS: 4.58 Total: 2.66 kcal Atomic # 7 Polarization: 0.71 SS G_CDS: -5.26 Total: -4.55 kcal Atomic # 8 Polarization: -20.80 SS G_CDS: -4.05 Total: -24.84 kcal Atomic # 14 Polarization: -2.45 SS G_CDS: 2.11 Total: -0.33 kcal Total: -47.82 -5.21 -53.03 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12622748.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.851 kcal (2) G-P(sol) polarization free energy of solvation -47.818 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.026 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.176 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds