Wall clock time and date at job start Sun Mar 7 2021 04:58:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35891 * 116.99985 * 2 1 4 4 C 1.38816 * 119.93415 * 180.02562 * 3 2 1 5 5 C 1.37932 * 120.06264 * 179.97438 * 4 3 2 6 6 C 1.39350 * 119.93374 * 359.97438 * 5 4 3 7 7 C 1.48414 * 120.06331 * 179.97438 * 6 5 4 8 8 N 1.31619 * 126.03589 * 325.33063 * 7 6 5 9 9 N 1.40071 * 108.10847 * 180.12324 * 8 7 6 10 10 C 1.46495 * 125.93408 * 179.85355 * 9 8 7 11 11 C 1.50700 * 109.47364 * 304.69214 * 10 9 8 12 12 O 1.21284 * 119.99404 * 359.97438 * 11 10 9 13 13 N 1.34770 * 120.00248 * 179.72416 * 11 10 9 14 14 C 1.46506 * 120.00274 * 175.27154 * 13 11 10 15 15 C 1.50696 * 112.84719 * 293.53274 * 14 13 11 16 16 N 1.34784 * 120.00118 * 323.89493 * 15 14 13 17 17 O 1.21274 * 120.00222 * 143.90044 * 15 14 13 18 18 C 1.53777 * 113.61416 * 162.22218 * 14 13 11 19 19 C 1.53787 * 87.08008 * 220.01992 * 18 14 13 20 20 H 1.08998 * 113.61088 * 270.88812 * 19 18 14 21 21 O 1.42894 * 113.68993 * 139.99617 * 19 18 14 22 22 C 1.53778 * 113.61274 * 64.72354 * 14 13 11 23 23 C 1.35043 * 108.13783 * 359.59271 * 9 8 7 24 24 C 1.35085 * 107.97919 * 0.24211 * 23 9 8 25 25 C 1.50697 * 126.07530 * 180.02562 * 24 23 9 26 26 O 1.42899 * 109.47182 * 254.97550 * 25 24 23 27 27 Si 1.86301 * 109.47326 * 14.97329 * 25 24 23 28 28 C 1.39352 * 119.87325 * 0.25723 * 6 5 4 29 29 C 1.37920 * 119.93660 * 359.46298 * 28 6 5 30 30 H 1.08998 * 109.47104 * 59.99705 * 1 2 3 31 31 H 1.08996 * 109.46994 * 180.02562 * 1 2 3 32 32 H 1.09006 * 109.46774 * 299.99728 * 1 2 3 33 33 H 1.07999 * 119.97303 * 359.97271 * 4 3 2 34 34 H 1.07997 * 120.02969 * 180.02562 * 5 4 3 35 35 H 1.09006 * 109.47361 * 184.68671 * 10 9 8 36 36 H 1.09006 * 109.47248 * 64.68947 * 10 9 8 37 37 H 0.97004 * 119.99854 * 355.26794 * 13 11 10 38 38 H 0.97000 * 119.99527 * 354.98218 * 16 15 14 39 39 H 0.96991 * 119.99907 * 174.98457 * 16 15 14 40 40 H 1.09001 * 113.61742 * 334.56929 * 18 14 13 41 41 H 1.08997 * 113.61287 * 105.47535 * 18 14 13 42 42 H 0.96700 * 114.00261 * 82.46091 * 21 19 18 43 43 H 1.08997 * 113.61695 * 254.53186 * 22 14 13 44 44 H 1.09004 * 113.61544 * 25.35168 * 22 14 13 45 45 H 1.07997 * 126.00599 * 180.28392 * 23 9 8 46 46 H 1.09004 * 109.47070 * 134.97513 * 25 24 23 47 47 H 0.96699 * 114.00392 * 180.02562 * 26 25 24 48 48 H 1.48490 * 109.99989 * 300.00232 * 27 25 24 49 49 H 1.48500 * 109.99797 * 61.31929 * 27 25 24 50 50 H 1.08000 * 120.03576 * 179.74403 * 28 6 5 51 51 H 1.08002 * 119.97416 * 180.29797 * 29 28 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4323 1.2819 -0.0005 5 6 4.0612 2.5094 -0.0011 6 6 3.3035 3.6789 -0.0016 7 6 3.9773 5.0013 -0.0016 8 7 5.1085 5.2940 0.6042 9 7 5.3962 6.6431 0.3611 10 6 6.5642 7.3758 0.8562 11 6 6.6321 7.2580 2.3570 12 8 5.7876 6.6248 2.9543 13 7 7.6339 7.8521 3.0350 14 6 7.6438 7.8258 4.4998 15 6 6.5126 8.6150 5.1068 16 7 6.0978 9.7567 4.5226 17 8 5.9755 8.2231 6.1210 18 6 9.0179 8.1441 5.1124 19 6 8.7278 7.0382 6.1410 20 1 8.2069 7.3944 7.0297 21 8 9.8646 6.2297 6.4507 22 6 7.7956 6.4137 5.0895 23 6 4.4130 7.1497 -0.4136 24 6 3.5224 6.1631 -0.6552 25 6 2.2659 6.2839 -1.4783 26 8 1.1307 6.3257 -0.6114 27 14 2.3333 7.8476 -2.4889 28 6 1.9120 3.6045 0.0038 29 6 1.2886 2.3742 -0.0015 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5138 0.8901 33 1 4.0190 0.3752 -0.0005 34 1 5.1398 2.5641 -0.0019 35 1 6.4791 8.4262 0.5776 36 1 7.4694 6.9558 0.4175 37 1 8.3486 8.2972 2.5531 38 1 6.5735 10.1087 3.7540 39 1 5.3238 10.2262 4.8708 40 1 9.8540 7.9169 4.4511 41 1 9.0810 9.1408 5.5490 42 1 10.4547 6.6173 7.1114 43 1 6.8720 6.0135 5.5075 44 1 8.2963 5.7130 4.4213 45 1 4.3501 8.1648 -0.7767 46 1 2.1834 5.4245 -2.1438 47 1 0.2851 6.4028 -1.0740 48 1 2.4458 9.0266 -1.5932 49 1 3.4914 7.8027 -3.4173 50 1 1.3222 4.5092 0.0076 51 1 0.2102 2.3158 -0.0022 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_12622750.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:32 Heat of formation + Delta-G solvation = -45.155139 kcal Electronic energy + Delta-G solvation = -38703.587623 eV Core-core repulsion = 33573.133010 eV Total energy + Delta-G solvation = -5130.454613 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.167 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -42.67879 -42.30607 -41.02384 -40.22149 -39.09966 -38.48682 -37.63681 -36.55114 -35.01321 -34.79181 -33.96591 -32.34970 -32.09802 -31.18954 -29.13298 -28.05728 -27.19300 -26.60610 -25.68713 -24.01866 -23.70793 -23.09697 -21.94892 -21.60183 -20.89913 -20.56961 -19.34960 -19.17362 -18.69243 -18.44697 -18.27530 -18.21913 -17.75263 -17.14612 -17.04908 -16.68410 -16.62491 -16.49260 -16.14129 -15.97427 -15.77789 -15.56021 -15.23139 -15.16713 -14.95289 -14.89328 -14.69612 -14.57701 -14.21782 -13.94165 -13.83323 -13.77019 -13.65014 -13.49498 -13.31093 -12.94031 -12.80708 -12.71414 -12.68502 -12.17341 -12.12996 -11.92093 -11.79976 -11.64677 -11.53850 -11.28262 -11.07636 -10.89469 -10.59455 -10.40025 -10.16181 -10.04277 -9.76733 -8.99128 -4.87702 0.01134 0.32736 0.62507 1.12254 1.23668 1.29900 1.40086 1.57047 1.78621 1.81569 2.02640 2.21634 2.31441 2.75232 3.01783 3.14306 3.21470 3.32987 3.46052 3.47176 3.53023 3.74085 3.74645 3.79089 3.87875 3.90953 4.01016 4.06790 4.08681 4.19132 4.33645 4.35718 4.38983 4.46832 4.52113 4.53543 4.54503 4.67880 4.69380 4.73657 4.76146 4.82783 4.84098 5.01062 5.06405 5.12275 5.30054 5.46492 5.53879 5.62352 5.68828 5.75371 6.16246 6.28562 6.37565 6.48621 6.77514 6.98613 7.00966 7.06398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.335 6.335 3 C 0.126 3.874 4 C -0.169 4.169 5 C -0.062 4.062 6 C -0.076 4.076 7 C 0.119 3.881 8 N -0.292 5.292 9 N -0.360 5.360 10 C 0.110 3.890 11 C 0.494 3.506 12 O -0.547 6.547 13 N -0.692 5.692 14 C 0.136 3.864 15 C 0.530 3.470 16 N -0.828 5.828 17 O -0.578 6.578 18 C -0.126 4.126 19 C 0.080 3.920 20 H 0.083 0.917 21 O -0.570 6.570 22 C -0.118 4.118 23 C 0.059 3.941 24 C -0.229 4.229 25 C -0.049 4.049 26 O -0.562 6.562 27 Si 0.789 3.211 28 C -0.064 4.064 29 C -0.208 4.208 30 H 0.071 0.929 31 H 0.117 0.883 32 H 0.063 0.937 33 H 0.139 0.861 34 H 0.126 0.874 35 H 0.180 0.820 36 H 0.149 0.851 37 H 0.432 0.568 38 H 0.418 0.582 39 H 0.409 0.591 40 H 0.136 0.864 41 H 0.107 0.893 42 H 0.400 0.600 43 H 0.048 0.952 44 H 0.094 0.906 45 H 0.201 0.799 46 H 0.076 0.924 47 H 0.401 0.599 48 H -0.282 1.282 49 H -0.287 1.287 50 H 0.166 0.834 51 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.815 10.088 -8.515 13.325 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.248 6.248 3 C 0.080 3.920 4 C -0.188 4.188 5 C -0.081 4.081 6 C -0.079 4.079 7 C -0.046 4.046 8 N -0.113 5.113 9 N -0.142 5.142 10 C -0.013 4.013 11 C 0.280 3.720 12 O -0.422 6.422 13 N -0.351 5.351 14 C 0.045 3.955 15 C 0.313 3.687 16 N -0.392 5.392 17 O -0.456 6.456 18 C -0.164 4.164 19 C 0.020 3.980 20 H 0.100 0.900 21 O -0.378 6.378 22 C -0.157 4.157 23 C -0.086 4.086 24 C -0.240 4.240 25 C -0.158 4.158 26 O -0.372 6.372 27 Si 0.692 3.308 28 C -0.082 4.082 29 C -0.227 4.227 30 H 0.090 0.910 31 H 0.135 0.865 32 H 0.082 0.918 33 H 0.157 0.843 34 H 0.144 0.856 35 H 0.197 0.803 36 H 0.166 0.834 37 H 0.273 0.727 38 H 0.249 0.751 39 H 0.240 0.760 40 H 0.154 0.846 41 H 0.125 0.875 42 H 0.251 0.749 43 H 0.067 0.933 44 H 0.112 0.888 45 H 0.217 0.783 46 H 0.093 0.907 47 H 0.252 0.748 48 H -0.208 1.208 49 H -0.214 1.214 50 H 0.183 0.817 51 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 2.804 9.012 -6.864 11.670 hybrid contribution -0.147 0.435 0.296 0.546 sum 2.658 9.447 -6.568 11.809 Atomic orbital electron populations 1.23382 0.76229 1.05649 1.02522 1.86057 1.23684 1.26777 1.88305 1.19340 0.92474 0.84954 0.95191 1.20483 0.92068 0.98550 1.07657 1.21043 0.99898 0.90908 0.96269 1.17899 0.93461 0.88974 1.07519 1.20843 0.93080 0.94434 0.96269 1.77686 1.17673 0.93587 1.22367 1.48077 1.19787 1.07343 1.38961 1.22024 0.88373 1.00759 0.90185 1.21233 0.81445 0.78641 0.90707 1.90907 1.40875 1.39731 1.70639 1.45555 1.27178 1.58229 1.04150 1.21275 0.96076 0.96905 0.81266 1.20372 0.83493 0.81420 0.83398 1.43566 1.34648 1.25332 1.35630 1.90769 1.57770 1.70332 1.26718 1.23906 0.93039 1.01215 0.98230 1.23109 0.87377 0.91471 0.96050 0.89961 1.86496 1.37170 1.48966 1.65186 1.23184 0.98973 0.95661 0.97844 1.22580 0.89885 1.00001 0.96159 1.19881 1.00928 0.92930 1.10310 1.24281 0.83597 1.12481 0.95444 1.86401 1.17174 1.96413 1.37228 0.93898 0.86593 0.72665 0.77620 1.21876 0.93117 0.99537 0.93716 1.21453 1.01387 0.91174 1.08653 0.91036 0.86483 0.91821 0.84291 0.85555 0.80297 0.83369 0.72684 0.75084 0.75954 0.84596 0.87485 0.74918 0.93342 0.88774 0.78268 0.90650 0.74754 1.20818 1.21375 0.81679 0.82550 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.33 -2.62 10.49 -92.33 -0.97 -3.59 16 3 C 0.13 1.19 6.69 22.55 0.15 1.34 16 4 C -0.17 -1.80 9.97 22.34 0.22 -1.58 16 5 C -0.06 -0.76 9.74 22.46 0.22 -0.54 16 6 C -0.08 -0.98 5.80 -20.03 -0.12 -1.10 16 7 C 0.12 1.62 6.74 42.53 0.29 1.91 16 8 N -0.29 -4.29 11.65 -48.16 -0.56 -4.85 16 9 N -0.36 -2.08 3.39 -351.91 -1.19 -3.27 16 10 C 0.11 -0.61 6.99 85.63 0.60 -0.01 16 11 C 0.49 0.76 7.51 87.66 0.66 1.42 16 12 O -0.55 -8.61 14.76 -3.04 -0.04 -8.65 16 13 N -0.69 4.40 4.79 -423.94 -2.03 2.37 16 14 C 0.14 0.05 1.05 3.38 0.00 0.06 16 15 C 0.53 3.06 6.61 87.65 0.58 3.64 16 16 N -0.83 2.64 8.78 -173.53 -1.52 1.12 16 17 O -0.58 -9.69 16.21 -3.01 -0.05 -9.74 16 18 C -0.13 0.73 7.22 31.12 0.22 0.96 16 19 C 0.08 0.23 4.82 31.12 0.15 0.38 16 20 H 0.08 0.44 7.63 -2.39 -0.02 0.42 16 21 O -0.57 -1.50 13.67 -148.98 -2.04 -3.53 16 22 C -0.12 -1.00 6.15 31.12 0.19 -0.81 16 23 C 0.06 0.24 9.96 83.47 0.83 1.08 16 24 C -0.23 -1.82 5.37 -19.95 -0.11 -1.93 16 25 C -0.05 -0.03 1.99 71.23 0.14 0.11 16 26 O -0.56 0.00 10.07 -148.98 -1.50 -1.50 16 27 Si 0.79 -3.76 30.78 68.60 2.11 -1.65 16 28 C -0.06 -0.58 8.94 22.46 0.20 -0.38 16 29 C -0.21 -1.38 9.02 22.33 0.20 -1.18 16 30 H 0.07 -0.26 7.65 -2.39 -0.02 -0.28 16 31 H 0.12 -0.51 8.14 -2.39 -0.02 -0.53 16 32 H 0.06 -0.13 7.66 -2.38 -0.02 -0.15 16 33 H 0.14 1.12 8.06 -2.91 -0.02 1.10 16 34 H 0.13 1.47 8.06 -2.91 -0.02 1.45 16 35 H 0.18 -2.96 8.07 -2.38 -0.02 -2.98 16 36 H 0.15 -1.63 8.14 -2.38 -0.02 -1.65 16 37 H 0.43 -7.18 8.71 -92.71 -0.81 -7.98 16 38 H 0.42 -4.68 8.47 -92.71 -0.79 -5.47 16 39 H 0.41 -1.33 8.93 -92.72 -0.83 -2.16 16 40 H 0.14 -1.40 8.14 -2.39 -0.02 -1.42 16 41 H 0.11 -1.01 8.10 -2.39 -0.02 -1.03 16 42 H 0.40 -2.72 9.12 -74.06 -0.68 -3.39 16 43 H 0.05 0.85 7.63 -2.39 -0.02 0.83 16 44 H 0.09 0.86 8.14 -2.39 -0.02 0.84 16 45 H 0.20 -0.64 6.36 -2.91 -0.02 -0.66 16 46 H 0.08 -0.04 7.84 -2.38 -0.02 -0.06 16 47 H 0.40 -4.49 8.74 -74.06 -0.65 -5.14 16 48 H -0.28 0.10 7.04 99.48 0.70 0.81 16 49 H -0.29 -0.08 7.11 99.48 0.71 0.62 16 50 H 0.17 1.14 4.51 -2.91 -0.01 1.12 16 51 H 0.16 0.08 6.28 -2.91 -0.02 0.06 16 Total: 0.00 -49.60 427.49 -4.89 -54.49 By element: Atomic # 1 Polarization: -23.01 SS G_CDS: -2.64 Total: -25.65 kcal Atomic # 6 Polarization: -1.09 SS G_CDS: 5.55 Total: 4.46 kcal Atomic # 7 Polarization: 0.67 SS G_CDS: -5.31 Total: -4.63 kcal Atomic # 8 Polarization: -22.41 SS G_CDS: -4.60 Total: -27.01 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 2.11 Total: -1.65 kcal Total: -49.60 -4.89 -54.49 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12622750.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.333 kcal (2) G-P(sol) polarization free energy of solvation -49.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.265 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.890 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.488 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds