Wall clock time and date at job start Sun Mar 7 2021 04:58:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34771 * 1 3 3 O 1.21286 * 119.99755 * 2 1 4 4 C 1.50700 * 120.00136 * 179.97438 * 2 1 3 5 5 N 1.46494 * 112.84872 * 45.62130 * 4 2 1 6 6 C 1.34777 * 120.00301 * 54.36083 * 5 4 2 7 7 O 1.21628 * 119.99867 * 355.02829 * 6 5 4 8 8 C 1.47294 * 120.00151 * 175.02553 * 6 5 4 9 9 C 1.39878 * 120.04655 * 359.72416 * 8 6 5 10 10 C 1.36426 * 120.18071 * 179.71153 * 9 8 6 11 11 C 1.39923 * 120.28397 * 0.56606 * 10 9 8 12 12 C 1.47568 * 119.95611 * 179.73544 * 11 10 9 13 13 C 1.36098 * 125.94479 * 359.97438 * 12 11 10 14 14 C 1.40797 * 106.73337 * 179.97438 * 13 12 11 15 15 C 1.34839 * 107.05151 * 0.02562 * 14 13 12 16 16 C 1.50692 * 125.65690 * 180.02562 * 15 14 13 17 17 O 1.42900 * 109.47405 * 64.99820 * 16 15 14 18 18 Si 1.86292 * 109.47278 * 185.00040 * 16 15 14 19 19 O 1.34237 * 108.68935 * 359.75629 * 15 14 13 20 20 C 1.39606 * 120.08365 * 359.71344 * 11 10 9 21 21 C 1.38274 * 119.81711 * 0.02562 * 20 11 10 22 22 O 1.35673 * 120.13874 * 179.97438 * 21 20 11 23 23 C 1.53780 * 113.61443 * 274.42272 * 4 2 1 24 24 C 1.53773 * 87.08288 * 220.02070 * 23 4 2 25 25 H 1.09002 * 113.61958 * 139.98636 * 24 23 4 26 26 O 1.42909 * 113.61555 * 270.80299 * 24 23 4 27 27 C 1.53776 * 87.08370 * 25.43052 * 24 23 4 28 28 H 0.97007 * 120.00346 * 185.00678 * 1 2 3 29 29 H 0.96998 * 120.00574 * 5.00524 * 1 2 3 30 30 H 0.97003 * 120.00203 * 234.36048 * 5 4 2 31 31 H 1.08001 * 119.90463 * 0.02562 * 9 8 6 32 32 H 1.08007 * 119.85360 * 180.30163 * 10 9 8 33 33 H 1.07995 * 126.63615 * 0.02562 * 13 12 11 34 34 H 1.08004 * 126.47480 * 179.97438 * 14 13 12 35 35 H 1.09008 * 109.47130 * 305.00073 * 16 15 14 36 36 H 0.96701 * 114.00081 * 180.02562 * 17 16 15 37 37 H 1.48503 * 110.00252 * 299.99979 * 18 16 15 38 38 H 1.48504 * 110.00278 * 61.31682 * 18 16 15 39 39 H 1.08006 * 120.09116 * 179.97438 * 20 11 10 40 40 H 0.96698 * 114.00413 * 270.01825 * 22 21 20 41 41 H 1.09000 * 113.61307 * 105.47054 * 23 4 2 42 42 H 1.09001 * 113.61388 * 334.57546 * 23 4 2 43 43 H 0.96699 * 113.99835 * 178.47144 * 26 24 23 44 44 H 1.09005 * 113.61258 * 89.11365 * 27 24 23 45 45 H 1.08999 * 113.61941 * 220.01550 * 27 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1012 -1.3051 0.0006 5 7 1.5680 -2.2702 -0.9639 6 6 1.4365 -1.9253 -2.2601 7 8 1.6745 -0.7860 -2.6133 8 6 1.0045 -2.9279 -3.2489 9 6 0.7361 -4.2398 -2.8447 10 6 0.3302 -5.1691 -3.7572 11 6 0.1908 -4.8205 -5.1052 12 6 -0.2431 -5.8331 -6.0871 13 6 -0.5376 -7.1339 -5.8162 14 6 -0.9041 -7.7295 -7.0382 15 6 -0.8161 -6.7743 -7.9858 16 6 -1.1172 -6.9596 -9.4506 17 8 -2.5045 -7.2587 -9.6177 18 14 -0.7039 -5.3945 -10.3725 19 8 -0.4215 -5.6292 -7.4069 20 6 0.4612 -3.5159 -5.5222 21 6 0.8677 -2.5696 -4.5996 22 8 1.1328 -1.2999 -4.9978 23 6 2.3152 -1.8923 1.4057 24 6 3.7273 -2.2853 0.9408 25 1 4.4950 -2.1328 1.6994 26 8 3.7921 -3.5795 0.3382 27 6 3.6278 -1.1351 -0.0750 28 1 -0.4851 -0.8369 0.0733 29 1 -0.4851 0.8368 -0.0733 30 1 1.3095 -3.1577 -0.6696 31 1 0.8456 -4.5164 -1.8065 32 1 0.1197 -6.1794 -3.4385 33 1 -0.4986 -7.6159 -4.8505 34 1 -1.1991 -8.7576 -7.1884 35 1 -0.5185 -7.7816 -9.8434 36 1 -2.7702 -7.3913 -10.5380 37 1 -1.5135 -4.2662 -9.8464 38 1 0.7428 -5.0897 -10.2330 39 1 0.3540 -3.2468 -6.5627 40 1 2.0525 -1.1532 -5.2579 41 1 1.6740 -2.7462 1.6243 42 1 2.3087 -1.1432 2.1975 43 1 4.6732 -3.8227 0.0227 44 1 3.9803 -0.1790 0.3120 45 1 4.0463 -1.3777 -1.0518 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12807986.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:38 Heat of formation + Delta-G solvation = -100.860818 kcal Electronic energy + Delta-G solvation = -34219.673463 eV Core-core repulsion = 29365.585757 eV Total energy + Delta-G solvation = -4854.087706 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.129 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.78124 -42.30692 -41.08956 -39.25866 -39.05640 -38.06993 -37.83729 -36.13123 -34.63169 -34.40370 -34.09731 -33.03538 -31.37535 -30.56990 -27.49609 -27.10128 -26.51693 -24.46634 -24.10667 -22.71368 -22.36536 -21.94489 -21.37753 -20.36181 -19.71053 -19.07271 -18.77288 -18.75417 -18.09775 -18.00867 -17.81077 -17.08943 -17.05542 -16.58418 -16.53337 -16.12035 -15.92480 -15.88082 -15.56914 -15.47782 -15.27662 -15.04694 -14.63620 -14.52884 -14.26840 -14.11868 -13.95129 -13.88119 -13.73330 -13.59696 -13.50795 -13.14443 -12.80205 -12.72502 -12.54291 -12.11044 -11.88897 -11.83944 -11.24209 -11.16903 -11.01408 -10.78618 -10.74208 -10.54785 -10.52354 -10.05870 -9.99418 -9.05380 -5.15179 -0.83694 0.06503 0.59703 1.07836 1.33791 1.50642 1.52109 1.62322 1.89642 1.97728 1.99716 2.53048 2.60887 2.81063 2.95642 3.18054 3.22308 3.39030 3.47326 3.55712 3.56696 3.59801 3.72700 3.85445 3.88696 3.90213 4.07496 4.18067 4.24501 4.32667 4.44408 4.47686 4.52999 4.62590 4.69672 4.72877 4.77575 4.79275 4.93097 4.95600 5.03789 5.12663 5.31535 5.34610 5.41520 5.88414 5.93660 6.30842 6.40270 6.42992 6.47680 6.64302 7.14238 7.35857 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.849 5.849 2 C 0.537 3.463 3 O -0.529 6.529 4 C 0.134 3.866 5 N -0.699 5.699 6 C 0.558 3.442 7 O -0.501 6.501 8 C -0.164 4.164 9 C -0.060 4.060 10 C -0.116 4.116 11 C 0.032 3.968 12 C 0.021 3.979 13 C -0.174 4.174 14 C -0.168 4.168 15 C -0.002 4.002 16 C -0.036 4.036 17 O -0.543 6.543 18 Si 0.706 3.294 19 O -0.169 6.169 20 C -0.143 4.143 21 C 0.180 3.820 22 O -0.474 6.474 23 C -0.122 4.122 24 C 0.082 3.918 25 H 0.081 0.919 26 O -0.550 6.550 27 C -0.154 4.154 28 H 0.398 0.602 29 H 0.403 0.597 30 H 0.407 0.593 31 H 0.139 0.861 32 H 0.140 0.860 33 H 0.159 0.841 34 H 0.158 0.842 35 H 0.096 0.904 36 H 0.391 0.609 37 H -0.248 1.248 38 H -0.252 1.252 39 H 0.140 0.860 40 H 0.399 0.601 41 H 0.093 0.907 42 H 0.116 0.884 43 H 0.386 0.614 44 H 0.113 0.887 45 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.269 -8.590 -0.653 8.619 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.411 5.411 2 C 0.320 3.680 3 O -0.403 6.403 4 C 0.044 3.956 5 N -0.355 5.355 6 C 0.346 3.654 7 O -0.376 6.376 8 C -0.168 4.168 9 C -0.079 4.079 10 C -0.134 4.134 11 C 0.032 3.968 12 C -0.028 4.028 13 C -0.193 4.193 14 C -0.187 4.187 15 C -0.052 4.052 16 C -0.145 4.145 17 O -0.350 6.350 18 Si 0.605 3.395 19 O -0.067 6.067 20 C -0.162 4.162 21 C 0.133 3.867 22 O -0.285 6.285 23 C -0.160 4.160 24 C 0.022 3.978 25 H 0.099 0.901 26 O -0.356 6.356 27 C -0.193 4.193 28 H 0.226 0.774 29 H 0.234 0.766 30 H 0.245 0.755 31 H 0.157 0.843 32 H 0.158 0.842 33 H 0.177 0.823 34 H 0.176 0.824 35 H 0.114 0.886 36 H 0.240 0.760 37 H -0.172 1.172 38 H -0.177 1.177 39 H 0.158 0.842 40 H 0.258 0.742 41 H 0.112 0.888 42 H 0.134 0.866 43 H 0.235 0.765 44 H 0.131 0.869 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.169 -5.897 -0.097 5.900 hybrid contribution 0.360 -1.182 0.319 1.276 sum 0.529 -7.079 0.222 7.102 Atomic orbital electron populations 1.43739 1.07178 1.12923 1.77304 1.20198 0.82683 0.90415 0.74743 1.90752 1.68152 1.32635 1.48793 1.21397 0.95060 0.87771 0.91391 1.45493 1.66533 1.16604 1.06877 1.18028 0.77817 0.87760 0.81828 1.90921 1.48108 1.19471 1.79081 1.20400 1.07693 0.94537 0.94127 1.20844 0.95933 0.91106 1.00025 1.20707 1.01190 1.00784 0.90690 1.17773 0.97434 0.90649 0.90993 1.20351 1.06814 0.94750 0.80934 1.21910 1.04447 0.92899 1.00065 1.21558 1.04640 1.01167 0.91354 1.21470 1.04945 0.83877 0.94901 1.23793 0.87268 1.11763 0.91702 1.86467 1.21777 1.93975 1.32814 0.95265 0.81120 0.75773 0.87370 1.83964 1.67329 1.34928 1.20447 1.21566 1.02270 0.91648 1.00709 1.18269 0.94524 0.84192 0.89682 1.84774 1.33612 1.23549 1.86599 1.23346 0.97005 1.01561 0.94080 1.22657 0.97386 0.83085 0.94627 0.90139 1.86368 1.36475 1.32487 1.80298 1.23944 0.92921 1.00803 1.01633 0.77392 0.76587 0.75518 0.84329 0.84211 0.82330 0.82439 0.88591 0.75993 1.17232 1.17666 0.84234 0.74221 0.88833 0.86571 0.76514 0.86871 0.89882 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 -0.64 8.81 31.22 0.28 -0.36 16 2 C 0.54 1.96 5.72 -10.99 -0.06 1.89 16 3 O -0.53 -4.23 16.72 5.55 0.09 -4.14 16 4 C 0.13 0.08 0.95 -132.16 -0.13 -0.04 16 5 N -0.70 0.30 4.52 -49.03 -0.22 0.08 16 6 C 0.56 1.46 7.51 -12.58 -0.09 1.37 16 7 O -0.50 -3.34 13.98 -16.70 -0.23 -3.57 16 8 C -0.16 -0.24 5.89 -104.78 -0.62 -0.86 16 9 C -0.06 0.08 9.47 -39.62 -0.38 -0.30 16 10 C -0.12 0.10 9.48 -39.60 -0.38 -0.28 16 11 C 0.03 0.05 5.87 -104.95 -0.62 -0.56 16 12 C 0.02 0.06 7.02 -36.55 -0.26 -0.20 16 13 C -0.17 -0.21 10.25 -39.38 -0.40 -0.61 16 14 C -0.17 -0.29 10.78 -39.82 -0.43 -0.72 16 15 C 0.00 -0.01 6.24 -35.52 -0.22 -0.23 16 16 C -0.04 0.02 2.97 36.00 0.11 0.12 16 17 O -0.54 0.29 12.86 -35.23 -0.45 -0.16 16 18 Si 0.71 -0.62 32.11 -169.99 -5.46 -6.08 16 19 O -0.17 -0.69 8.79 4.71 0.04 -0.65 16 20 C -0.14 -0.35 9.65 -39.06 -0.38 -0.73 16 21 C 0.18 0.50 6.71 -38.75 -0.26 0.24 16 22 O -0.47 -1.75 11.56 -40.68 -0.47 -2.22 16 23 C -0.12 0.26 7.16 -25.92 -0.19 0.07 16 24 C 0.08 -0.16 5.27 -25.93 -0.14 -0.30 16 25 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 26 O -0.55 1.29 13.08 -35.23 -0.46 0.83 16 27 C -0.15 -0.12 7.01 -25.92 -0.18 -0.30 16 28 H 0.40 -0.76 8.75 -40.82 -0.36 -1.12 16 29 H 0.40 0.20 8.93 -40.82 -0.36 -0.16 16 30 H 0.41 -1.16 6.63 -40.82 -0.27 -1.43 16 31 H 0.14 -0.59 6.39 -52.49 -0.34 -0.93 16 32 H 0.14 -0.46 6.95 -52.48 -0.36 -0.82 16 33 H 0.16 -0.27 7.24 -52.49 -0.38 -0.65 16 34 H 0.16 -0.02 8.06 -52.48 -0.42 -0.45 16 35 H 0.10 -0.30 7.96 -51.92 -0.41 -0.71 16 36 H 0.39 -2.37 8.74 45.56 0.40 -1.97 16 37 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 38 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 39 H 0.14 0.36 7.90 -52.48 -0.41 -0.06 16 40 H 0.40 0.02 9.06 45.56 0.41 0.44 16 41 H 0.09 -0.32 8.10 -51.93 -0.42 -0.74 16 42 H 0.12 -0.30 8.09 -51.93 -0.42 -0.72 16 43 H 0.39 -2.05 9.12 45.56 0.42 -1.63 16 44 H 0.11 0.22 7.40 -51.93 -0.38 -0.17 16 45 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 LS Contribution 390.22 15.07 5.88 5.88 Total: 0.00 -15.39 390.22 -8.98 -24.38 By element: Atomic # 1 Polarization: -9.19 SS G_CDS: -3.36 Total: -12.55 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: -4.61 Total: -1.44 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: 0.05 Total: -0.28 kcal Atomic # 8 Polarization: -8.43 SS G_CDS: -1.48 Total: -9.91 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.46 Total: -6.08 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -15.39 -8.98 -24.38 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12807986.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.482 kcal (2) G-P(sol) polarization free energy of solvation -15.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.877 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.984 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.379 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.861 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds