Wall clock time and date at job start Sun Mar 7 2021 04:58:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.39285 * 121.03383 * 2 1 4 4 C 1.46490 * 134.20227 * 359.94821 * 3 2 1 5 5 C 1.50703 * 126.60208 * 0.02562 * 4 3 2 6 6 O 1.42902 * 109.46896 * 74.99723 * 5 4 3 7 7 Si 1.86299 * 109.47268 * 195.00164 * 5 4 3 8 8 C 1.34179 * 106.80553 * 180.26735 * 4 3 2 9 9 N 1.36951 * 109.94823 * 359.60510 * 8 4 3 10 10 C 1.37154 * 110.11541 * 0.41256 * 9 8 4 11 11 N 1.32815 * 132.96561 * 179.73676 * 10 9 8 12 12 C 1.31312 * 121.89098 * 180.02562 * 11 10 9 13 13 C 1.39756 * 121.02881 * 179.97438 * 2 1 3 14 14 C 1.47664 * 120.45222 * 359.97438 * 13 2 1 15 15 O 1.21574 * 120.00089 * 5.24067 * 14 13 2 16 16 N 1.34779 * 119.99624 * 185.23266 * 14 13 2 17 17 C 1.46504 * 119.99500 * 185.10628 * 16 14 13 18 18 C 1.50696 * 112.84795 * 284.92649 * 17 16 14 19 19 N 1.34778 * 120.00538 * 322.70663 * 18 17 16 20 20 O 1.21281 * 119.99761 * 142.70362 * 18 17 16 21 21 C 1.53785 * 113.61024 * 153.62624 * 17 16 14 22 22 C 1.53784 * 87.07887 * 220.01292 * 21 17 16 23 23 H 1.08992 * 113.61966 * 270.88529 * 22 21 17 24 24 O 1.42897 * 113.68965 * 139.98936 * 22 21 17 25 25 C 1.53777 * 113.61749 * 56.12951 * 17 16 14 26 26 H 1.09000 * 109.46848 * 96.48919 * 1 2 3 27 27 H 1.09001 * 109.46884 * 216.49016 * 1 2 3 28 28 H 1.08999 * 109.46745 * 336.49139 * 1 2 3 29 29 H 1.09002 * 109.46952 * 314.99897 * 5 4 3 30 30 H 0.96704 * 113.99650 * 180.02562 * 6 5 4 31 31 H 1.48505 * 109.99592 * 178.67980 * 7 5 4 32 32 H 1.48501 * 109.99954 * 299.99694 * 7 5 4 33 33 H 1.08001 * 125.02740 * 179.76240 * 8 4 3 34 34 H 0.97001 * 124.94710 * 180.16882 * 9 8 4 35 35 H 1.07997 * 119.31074 * 180.02562 * 12 11 10 36 36 H 0.96993 * 120.00331 * 5.10188 * 16 14 13 37 37 H 0.96999 * 119.99472 * 5.00189 * 19 18 17 38 38 H 0.97001 * 120.00148 * 184.99798 * 19 18 17 39 39 H 1.08998 * 113.61431 * 334.56320 * 21 17 16 40 40 H 1.08995 * 113.61238 * 105.46986 * 21 17 16 41 41 H 0.96696 * 114.00112 * 82.46494 * 24 22 21 42 42 H 1.08997 * 113.61135 * 254.52953 * 25 17 16 43 43 H 1.08998 * 113.61749 * 25.42468 * 25 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1935 0.0000 4 6 1.8518 2.6100 -0.0009 5 6 0.4529 3.1706 -0.0018 6 8 -0.1194 3.0248 1.2995 7 14 0.5077 4.9762 -0.4574 8 6 2.9950 3.3125 -0.0064 9 7 4.0671 2.4603 -0.0001 10 6 3.6349 1.1586 0.0005 11 7 4.2721 -0.0067 0.0010 12 6 3.6267 -1.1503 0.0010 13 6 2.2274 -1.1976 0.0005 14 6 1.5224 -2.4950 0.0017 15 8 0.3109 -2.5286 -0.0940 16 7 2.2221 -3.6420 0.1086 17 6 1.5359 -4.9316 -0.0024 18 6 0.7424 -5.2804 1.2304 19 7 1.2196 -4.9646 2.4507 20 8 -0.3256 -5.8451 1.1244 21 6 2.4426 -6.0712 -0.4966 22 6 1.2476 -6.5518 -1.3369 23 1 0.5954 -7.2483 -0.8103 24 8 1.6100 -7.0091 -2.6413 25 6 0.7458 -5.0984 -1.3112 26 1 -0.3633 -0.1161 -1.0211 27 1 -0.3633 -0.8262 0.6112 28 1 -0.3633 0.9424 0.4099 29 1 -0.1544 2.6308 -0.7283 30 1 -1.0217 3.3647 1.3727 31 1 -0.8686 5.5330 -0.4928 32 1 1.3327 5.7233 0.5256 33 1 3.0601 4.3905 -0.0121 34 1 4.9968 2.7370 0.0000 35 1 4.1869 -2.0736 0.0018 36 1 3.1799 -3.6136 0.2591 37 1 2.0373 -4.4494 2.5332 38 1 0.7453 -5.2526 3.2463 39 1 3.2873 -5.7291 -1.0944 40 1 2.7332 -6.7694 0.2883 41 1 1.9265 -7.9226 -2.6640 42 1 -0.3332 -5.0112 -1.1839 43 1 1.1267 -4.4903 -2.1317 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_12890568.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:41 Heat of formation + Delta-G solvation = -35.768672 kcal Electronic energy + Delta-G solvation = -31189.203407 eV Core-core repulsion = 26817.139392 eV Total energy + Delta-G solvation = -4372.064015 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.136 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.87935 -42.19893 -40.34345 -38.92558 -38.59899 -37.88679 -36.44446 -35.01980 -34.77742 -33.99969 -32.06004 -30.96402 -28.83830 -27.08167 -26.80453 -26.20048 -24.62562 -23.91203 -22.86970 -21.81328 -20.42106 -20.32681 -19.40940 -19.09192 -18.69671 -18.53094 -18.31338 -17.73221 -17.48642 -16.89455 -16.59552 -16.39786 -16.06944 -15.86269 -15.67517 -15.43659 -15.14872 -14.98233 -14.74421 -14.63943 -14.17517 -13.97734 -13.82168 -13.69484 -13.59419 -13.48397 -13.28061 -13.06915 -12.86177 -12.70829 -12.37094 -12.03576 -11.72679 -11.40681 -11.08479 -11.02510 -10.96445 -10.70374 -10.48155 -10.26993 -10.16755 -9.61581 -9.14813 -5.03672 -0.26817 -0.07306 1.19846 1.35368 1.39766 1.49881 1.60742 1.81616 1.87687 1.92322 2.37011 2.80695 3.09096 3.22853 3.26102 3.31503 3.44964 3.54529 3.62764 3.64967 3.69869 3.73976 3.84696 4.06428 4.10189 4.17830 4.28233 4.43484 4.45824 4.59707 4.63549 4.73201 4.80393 4.89374 4.93938 5.03576 5.13521 5.19332 5.26133 5.37066 5.51722 5.74446 5.75332 6.09173 6.22196 6.32446 6.43624 6.66311 6.82945 7.11577 7.21103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.088 3.912 3 C -0.148 4.148 4 C -0.133 4.133 5 C -0.045 4.045 6 O -0.534 6.534 7 Si 0.682 3.318 8 C 0.073 3.927 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.502 5.502 12 C 0.180 3.820 13 C -0.235 4.235 14 C 0.573 3.427 15 O -0.511 6.511 16 N -0.718 5.718 17 C 0.129 3.871 18 C 0.538 3.462 19 N -0.847 5.847 20 O -0.525 6.525 21 C -0.157 4.157 22 C 0.081 3.919 23 H 0.096 0.904 24 O -0.553 6.553 25 C -0.101 4.101 26 H 0.083 0.917 27 H 0.098 0.902 28 H 0.078 0.922 29 H 0.078 0.922 30 H 0.379 0.621 31 H -0.258 1.258 32 H -0.252 1.252 33 H 0.184 0.816 34 H 0.426 0.574 35 H 0.162 0.838 36 H 0.403 0.597 37 H 0.401 0.599 38 H 0.405 0.595 39 H 0.111 0.889 40 H 0.083 0.917 41 H 0.381 0.619 42 H 0.096 0.904 43 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.776 2.385 -0.475 6.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C 0.079 3.921 3 C -0.155 4.155 4 C -0.140 4.140 5 C -0.155 4.155 6 O -0.341 6.341 7 Si 0.582 3.418 8 C -0.054 4.054 9 N -0.174 5.174 10 C 0.076 3.924 11 N -0.215 5.215 12 C 0.011 3.989 13 C -0.242 4.242 14 C 0.361 3.639 15 O -0.387 6.387 16 N -0.374 5.374 17 C 0.039 3.961 18 C 0.320 3.680 19 N -0.410 5.410 20 O -0.399 6.399 21 C -0.195 4.195 22 C 0.021 3.979 23 H 0.113 0.887 24 O -0.359 6.359 25 C -0.139 4.139 26 H 0.102 0.898 27 H 0.117 0.883 28 H 0.096 0.904 29 H 0.095 0.905 30 H 0.227 0.773 31 H -0.182 1.182 32 H -0.177 1.177 33 H 0.201 0.799 34 H 0.265 0.735 35 H 0.179 0.821 36 H 0.240 0.760 37 H 0.229 0.771 38 H 0.236 0.764 39 H 0.130 0.870 40 H 0.102 0.898 41 H 0.229 0.771 42 H 0.115 0.885 43 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 5.444 3.332 -0.607 6.411 hybrid contribution -0.152 -0.485 1.566 1.647 sum 5.292 2.847 0.959 6.085 Atomic orbital electron populations 1.21250 0.88958 1.04652 1.03927 1.19886 0.97083 0.89150 0.85936 1.19465 0.92850 0.93501 1.09696 1.19425 0.93156 0.90562 1.10844 1.24115 0.92093 1.11378 0.87905 1.86637 1.33723 1.83813 1.29950 0.95187 0.83496 0.73989 0.89090 1.21736 0.84979 0.95963 1.02699 1.41499 1.09612 1.02675 1.63634 1.18472 0.89259 0.85905 0.98745 1.66434 1.40497 0.95976 1.18575 1.22492 0.89960 0.94487 0.91959 1.20334 0.94745 0.93352 1.15809 1.17963 0.86946 0.83082 0.75923 1.90812 1.13217 1.86718 1.47909 1.45804 1.11568 1.04112 1.75913 1.21506 0.95827 0.84481 0.94287 1.20023 0.85324 0.78044 0.84630 1.43719 1.30580 1.58744 1.07989 1.90785 1.20759 1.41963 1.86389 1.24016 0.98983 0.95867 1.00645 1.23216 0.94595 0.96208 0.83865 0.88660 1.86540 1.86990 1.34188 1.28157 1.23167 1.02291 0.94521 0.93938 0.89835 0.88337 0.90370 0.90456 0.77298 1.18203 1.17682 0.79869 0.73484 0.82065 0.75989 0.77101 0.76364 0.87042 0.89830 0.77118 0.88542 0.88038 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.33 8.47 36.01 0.31 -0.03 16 2 C 0.09 0.24 5.98 -103.66 -0.62 -0.38 16 3 C -0.15 -0.38 6.16 -105.13 -0.65 -1.03 16 4 C -0.13 -0.11 5.61 -102.73 -0.58 -0.69 16 5 C -0.04 0.03 1.87 36.01 0.07 0.09 16 6 O -0.53 -0.36 11.65 -35.23 -0.41 -0.77 16 7 Si 0.68 -1.51 30.79 -169.99 -5.23 -6.74 16 8 C 0.07 -0.08 10.44 -16.70 -0.17 -0.26 16 9 N -0.57 0.40 6.04 -12.12 -0.07 0.33 16 10 C 0.31 0.65 8.42 -155.72 -1.31 -0.66 16 11 N -0.50 -0.99 10.37 -11.96 -0.12 -1.11 16 12 C 0.18 0.01 10.66 -17.11 -0.18 -0.17 16 13 C -0.24 -0.34 5.89 -104.82 -0.62 -0.96 16 14 C 0.57 0.94 7.38 -12.41 -0.09 0.85 16 15 O -0.51 -2.54 12.50 5.30 0.07 -2.47 16 16 N -0.72 1.08 4.62 -48.91 -0.23 0.86 16 17 C 0.13 0.01 1.07 -132.16 -0.14 -0.13 16 18 C 0.54 1.18 6.89 -10.99 -0.08 1.11 16 19 N -0.85 0.92 8.83 31.22 0.28 1.19 16 20 O -0.52 -3.32 16.23 5.56 0.09 -3.23 16 21 C -0.16 0.31 7.25 -25.92 -0.19 0.13 16 22 C 0.08 0.04 4.82 -25.92 -0.13 -0.08 16 23 H 0.10 0.10 7.67 -51.93 -0.40 -0.30 16 24 O -0.55 -0.40 13.67 -35.23 -0.48 -0.89 16 25 C -0.10 -0.23 5.83 -25.92 -0.15 -0.38 16 26 H 0.08 0.18 8.14 -51.93 -0.42 -0.24 16 27 H 0.10 0.40 5.94 -51.93 -0.31 0.09 16 28 H 0.08 0.15 4.78 -51.93 -0.25 -0.10 16 29 H 0.08 -0.11 7.13 -51.93 -0.37 -0.48 16 30 H 0.38 -1.19 8.74 45.56 0.40 -0.80 16 31 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 32 H -0.25 -0.01 7.05 56.52 0.40 0.39 16 33 H 0.18 -0.77 6.31 -52.49 -0.33 -1.11 16 34 H 0.43 -1.45 8.96 -40.82 -0.37 -1.82 16 35 H 0.16 -0.63 6.46 -52.49 -0.34 -0.97 16 36 H 0.40 -1.92 6.87 -40.82 -0.28 -2.20 16 37 H 0.40 -1.42 8.36 -40.82 -0.34 -1.76 16 38 H 0.41 -0.68 8.93 -40.82 -0.36 -1.04 16 39 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 40 H 0.08 -0.26 8.10 -51.93 -0.42 -0.68 16 41 H 0.38 -1.36 9.12 45.56 0.42 -0.94 16 42 H 0.10 0.46 7.61 -51.93 -0.40 0.07 16 43 H 0.10 0.26 8.14 -51.93 -0.42 -0.17 16 LS Contribution 355.00 15.07 5.35 5.35 Total: 0.00 -13.43 355.00 -9.11 -22.54 By element: Atomic # 1 Polarization: -8.65 SS G_CDS: -3.82 Total: -12.47 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -4.53 Total: -2.59 kcal Atomic # 7 Polarization: 1.41 SS G_CDS: -0.15 Total: 1.27 kcal Atomic # 8 Polarization: -6.62 SS G_CDS: -0.74 Total: -7.36 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.23 Total: -6.74 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -13.43 -9.11 -22.54 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_12890568.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.225 kcal (2) G-P(sol) polarization free energy of solvation -13.429 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.114 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds