Wall clock time and date at job start Sun Mar 7 2021 04:58:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21278 * 119.99924 * 2 1 4 4 C 1.50704 * 120.00138 * 179.97438 * 2 1 3 5 5 N 1.46498 * 112.84843 * 325.54604 * 4 2 1 6 6 C 1.34777 * 120.00618 * 298.34344 * 5 4 2 7 7 O 1.21642 * 119.99571 * 354.99373 * 6 5 4 8 8 C 1.47056 * 120.00277 * 174.99414 * 6 5 4 9 9 C 1.35863 * 125.42632 * 180.02562 * 8 6 5 10 10 C 1.41593 * 107.72593 * 179.97438 * 9 8 6 11 11 C 1.40069 * 133.37612 * 180.02562 * 10 9 8 12 12 C 1.36473 * 119.82768 * 180.27512 * 11 10 9 13 13 C 1.38897 * 120.61450 * 359.44987 * 12 11 10 14 14 C 1.50697 * 119.67497 * 180.28052 * 13 12 11 15 15 O 1.42902 * 109.47306 * 120.27339 * 14 13 12 16 16 Si 1.86299 * 109.47387 * 0.27253 * 14 13 12 17 17 C 1.37708 * 120.64937 * 0.55560 * 13 12 11 18 18 C 1.39190 * 119.80940 * 359.72430 * 17 13 12 19 19 N 1.37485 * 133.18714 * 179.97438 * 18 17 13 20 20 C 1.53777 * 113.61310 * 194.35627 * 4 2 1 21 21 C 1.54057 * 86.98470 * 219.97686 * 20 4 2 22 22 H 1.09002 * 113.61597 * 139.97510 * 21 20 4 23 23 O 1.42894 * 113.69091 * 270.87198 * 21 20 4 24 24 C 1.53776 * 113.61666 * 96.74705 * 4 2 1 25 25 H 0.97008 * 119.99496 * 175.08348 * 1 2 3 26 26 H 0.97000 * 120.00367 * 355.08593 * 1 2 3 27 27 H 0.97009 * 119.99421 * 118.33833 * 5 4 2 28 28 H 1.08002 * 126.13624 * 359.94394 * 9 8 6 29 29 H 1.08000 * 120.08456 * 0.02562 * 11 10 9 30 30 H 1.08001 * 119.69510 * 179.69844 * 12 11 10 31 31 H 1.09001 * 109.47349 * 240.26928 * 14 13 12 32 32 H 0.96696 * 114.00385 * 179.97438 * 15 14 13 33 33 H 1.48500 * 109.99927 * 298.68142 * 16 14 13 34 34 H 1.48496 * 110.00074 * 59.99830 * 16 14 13 35 35 H 1.07999 * 120.10055 * 179.70490 * 17 13 12 36 36 H 0.96997 * 125.61061 * 0.03881 * 19 18 17 37 37 H 1.08999 * 113.61547 * 334.47947 * 20 4 2 38 38 H 1.09006 * 113.61645 * 105.38684 * 20 4 2 39 39 H 0.96696 * 114.00445 * 277.53090 * 23 21 20 40 40 H 1.09003 * 113.61526 * 254.61825 * 24 4 2 41 41 H 1.09005 * 113.61190 * 25.51218 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.4216 -2.3540 0.7648 6 6 1.2033 -2.1921 2.0849 7 8 1.6499 -1.2178 2.6601 8 6 0.4252 -3.1933 2.8298 9 6 0.1392 -3.1404 4.1569 10 6 -0.6259 -4.2874 4.4791 11 6 -1.1952 -4.7613 5.6679 12 6 -1.8917 -5.9349 5.6663 13 6 -2.0522 -6.6606 4.4930 14 6 -2.8307 -7.9507 4.5142 15 8 -3.9455 -7.8491 3.6260 16 14 -3.4422 -8.2787 6.2432 17 6 -1.5020 -6.2158 3.3116 18 6 -0.7823 -5.0246 3.2887 19 7 -0.1308 -4.3378 2.2916 20 6 3.5914 -1.1559 0.3499 21 6 3.8690 -2.2059 -0.7427 22 1 4.7524 -1.9883 -1.3430 23 8 3.8404 -3.5525 -0.2654 24 6 2.5527 -1.7565 -1.3984 25 1 -0.4850 -0.8371 -0.0720 26 1 -0.4851 0.8369 0.0720 27 1 1.1287 -3.1652 0.3206 28 1 0.4416 -2.3631 4.8431 29 1 -1.0798 -4.2014 6.5842 30 1 -2.3257 -6.3007 6.5852 31 1 -2.1858 -8.7697 4.1955 32 1 -4.4926 -8.6455 3.5886 33 1 -2.2912 -8.4182 7.1711 34 1 -4.3227 -7.1693 6.6895 35 1 -1.6282 -6.7896 2.4054 36 1 -0.0720 -4.6114 1.3629 37 1 3.9969 -0.1702 0.1213 38 1 3.8401 -1.4942 1.3558 39 1 4.6655 -3.8409 0.1481 40 1 1.9632 -2.5793 -1.8031 41 1 2.6746 -0.9347 -2.1041 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13158378.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:48 Heat of formation + Delta-G solvation = -48.191781 kcal Electronic energy + Delta-G solvation = -28444.260204 eV Core-core repulsion = 24292.621012 eV Total energy + Delta-G solvation = -4151.639192 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.125 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.83297 -42.10806 -39.93712 -39.20720 -38.79721 -37.03878 -36.27424 -34.79063 -33.98560 -33.31256 -31.18986 -30.47426 -27.65730 -27.16548 -26.40252 -24.42321 -23.28598 -22.38157 -21.98928 -21.28306 -20.48290 -19.70099 -19.16860 -18.46190 -18.21486 -17.96141 -17.88557 -17.30627 -16.80033 -16.44822 -16.31231 -15.79426 -15.68020 -15.52491 -15.20248 -15.10817 -14.96497 -14.77174 -14.62828 -14.35332 -14.04804 -13.94889 -13.68768 -13.36674 -13.18984 -12.72470 -12.60774 -12.28334 -12.16607 -11.91577 -11.86349 -11.45111 -11.33059 -11.01216 -10.97057 -10.69686 -10.36627 -10.19638 -9.36120 -8.85937 -4.97415 -0.38547 0.46460 0.94196 1.25505 1.37597 1.64164 1.68716 1.81204 1.98264 2.15512 2.45010 2.70247 2.76461 3.15082 3.32466 3.34335 3.48513 3.52000 3.57028 3.79710 3.81717 3.92573 4.14244 4.16418 4.27065 4.33440 4.38907 4.41505 4.43974 4.53886 4.62001 4.71053 4.84718 4.91967 4.94040 5.14776 5.26933 5.33912 5.48216 5.55914 5.74657 5.90109 6.09758 6.24519 6.28971 6.44256 6.56496 6.89456 7.20637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.849 5.849 2 C 0.532 3.468 3 O -0.527 6.527 4 C 0.133 3.867 5 N -0.700 5.700 6 C 0.587 3.413 7 O -0.503 6.503 8 C 0.014 3.986 9 C -0.097 4.097 10 C -0.118 4.118 11 C -0.049 4.049 12 C -0.152 4.152 13 C -0.044 4.044 14 C -0.072 4.072 15 O -0.546 6.546 16 Si 0.685 3.315 17 C -0.100 4.100 18 C 0.119 3.881 19 N -0.576 5.576 20 C -0.152 4.152 21 C 0.081 3.919 22 H 0.082 0.918 23 O -0.551 6.551 24 C -0.118 4.118 25 H 0.399 0.601 26 H 0.404 0.596 27 H 0.404 0.596 28 H 0.158 0.842 29 H 0.132 0.868 30 H 0.121 0.879 31 H 0.076 0.924 32 H 0.383 0.617 33 H -0.254 1.254 34 H -0.250 1.250 35 H 0.129 0.871 36 H 0.418 0.582 37 H 0.115 0.885 38 H 0.088 0.912 39 H 0.387 0.613 40 H 0.092 0.908 41 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.056 -7.953 -3.160 8.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.315 3.685 3 O -0.402 6.402 4 C 0.042 3.958 5 N -0.355 5.355 6 C 0.373 3.627 7 O -0.377 6.377 8 C -0.095 4.095 9 C -0.124 4.124 10 C -0.122 4.122 11 C -0.067 4.067 12 C -0.170 4.170 13 C -0.045 4.045 14 C -0.182 4.182 15 O -0.352 6.352 16 Si 0.586 3.414 17 C -0.120 4.120 18 C 0.009 3.991 19 N -0.181 5.181 20 C -0.191 4.191 21 C 0.022 3.978 22 H 0.100 0.900 23 O -0.357 6.357 24 C -0.156 4.156 25 H 0.226 0.774 26 H 0.236 0.764 27 H 0.239 0.761 28 H 0.176 0.824 29 H 0.150 0.850 30 H 0.138 0.862 31 H 0.093 0.907 32 H 0.230 0.770 33 H -0.179 1.179 34 H -0.174 1.174 35 H 0.147 0.853 36 H 0.256 0.744 37 H 0.133 0.867 38 H 0.107 0.893 39 H 0.236 0.764 40 H 0.111 0.889 41 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -1.495 -5.688 -2.403 6.353 hybrid contribution 0.258 -0.420 -0.782 0.924 sum -1.237 -6.108 -3.185 6.998 Atomic orbital electron populations 1.43784 1.07210 1.13032 1.77152 1.20329 0.82754 0.90528 0.74928 1.90770 1.68140 1.32446 1.48818 1.21452 0.93547 0.85858 0.94909 1.45444 1.60733 1.20958 1.08358 1.17212 0.79356 0.84930 0.81177 1.90934 1.49202 1.29516 1.67997 1.19975 1.05023 0.90258 0.94202 1.20966 0.99653 0.98362 0.93410 1.18182 1.03858 0.96722 0.93471 1.20324 0.94920 0.94852 0.96618 1.20344 1.03045 0.96509 0.97130 1.19025 0.97307 0.95287 0.92927 1.24697 0.90526 0.96654 1.06322 1.86489 1.40240 1.42670 1.65837 0.95412 0.83602 0.87852 0.74562 1.19827 0.99273 0.94314 0.98613 1.18271 0.97884 0.94942 0.88052 1.41863 1.46456 1.19442 1.10321 1.23979 0.92021 1.01696 1.01360 1.22716 0.97830 0.82355 0.94909 0.90014 1.86362 1.41932 1.27260 1.80147 1.23329 0.96567 1.02198 0.93520 0.77354 0.76448 0.76057 0.82402 0.85032 0.86203 0.90651 0.76959 1.17896 1.17424 0.85296 0.74375 0.86678 0.89339 0.76445 0.88937 0.86346 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.24 8.78 31.22 0.27 0.52 16 2 C 0.53 1.44 6.48 -10.99 -0.07 1.37 16 3 O -0.53 -3.62 16.76 5.56 0.09 -3.53 16 4 C 0.13 0.02 0.95 -132.16 -0.13 -0.11 16 5 N -0.70 0.80 4.16 -49.10 -0.20 0.60 16 6 C 0.59 1.11 7.35 -12.69 -0.09 1.02 16 7 O -0.50 -2.96 15.56 5.24 0.08 -2.88 16 8 C 0.01 0.02 6.96 -82.29 -0.57 -0.55 16 9 C -0.10 -0.24 10.53 -39.15 -0.41 -0.65 16 10 C -0.12 -0.31 6.16 -106.93 -0.66 -0.97 16 11 C -0.05 -0.10 10.06 -39.53 -0.40 -0.50 16 12 C -0.15 -0.34 8.59 -39.97 -0.34 -0.69 16 13 C -0.04 -0.08 5.43 -104.57 -0.57 -0.65 16 14 C -0.07 0.05 2.80 36.00 0.10 0.15 16 15 O -0.55 0.30 12.73 -35.23 -0.45 -0.15 16 16 Si 0.68 -0.97 29.75 -169.99 -5.06 -6.03 16 17 C -0.10 -0.14 9.61 -39.42 -0.38 -0.52 16 18 C 0.12 0.19 7.25 -83.98 -0.61 -0.42 16 19 N -0.58 0.37 6.08 -7.36 -0.04 0.33 16 20 C -0.15 -0.12 6.72 -25.78 -0.17 -0.30 16 21 C 0.08 -0.15 5.28 -25.77 -0.14 -0.29 16 22 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 23 O -0.55 1.07 13.09 -35.23 -0.46 0.61 16 24 C -0.12 0.27 7.18 -25.92 -0.19 0.08 16 25 H 0.40 -1.09 8.42 -40.82 -0.34 -1.44 16 26 H 0.40 -0.27 8.93 -40.82 -0.36 -0.64 16 27 H 0.40 -1.46 7.71 -40.82 -0.31 -1.78 16 28 H 0.16 0.31 8.06 -52.49 -0.42 -0.11 16 29 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 30 H 0.12 0.19 4.82 -52.49 -0.25 -0.06 16 31 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 32 H 0.38 -2.12 8.74 45.56 0.40 -1.72 16 33 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 34 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 35 H 0.13 -0.03 8.06 -52.49 -0.42 -0.45 16 36 H 0.42 -1.59 8.13 -40.82 -0.33 -1.92 16 37 H 0.11 0.21 7.34 -51.93 -0.38 -0.17 16 38 H 0.09 0.21 7.56 -51.93 -0.39 -0.18 16 39 H 0.39 -1.84 9.12 45.56 0.42 -1.43 16 40 H 0.09 -0.33 8.09 -51.93 -0.42 -0.75 16 41 H 0.12 -0.31 8.09 -51.93 -0.42 -0.73 16 LS Contribution 349.72 15.07 5.27 5.27 Total: 0.00 -12.43 349.72 -8.83 -21.26 By element: Atomic # 1 Polarization: -9.28 SS G_CDS: -3.71 Total: -12.99 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -4.63 Total: -3.01 kcal Atomic # 7 Polarization: 1.41 SS G_CDS: 0.03 Total: 1.44 kcal Atomic # 8 Polarization: -5.20 SS G_CDS: -0.74 Total: -5.94 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.06 Total: -6.03 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -12.43 -8.83 -21.26 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13158378.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.934 kcal (2) G-P(sol) polarization free energy of solvation -12.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.833 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.258 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds