Wall clock time and date at job start Sun Mar 7 2021 04:58:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34780 * 1 3 3 O 1.21284 * 119.99758 * 2 1 4 4 C 1.50695 * 120.00200 * 179.97438 * 2 1 3 5 5 N 1.46500 * 112.85055 * 334.95402 * 4 2 1 6 6 C 1.34779 * 119.99580 * 284.55607 * 5 4 2 7 7 O 1.21275 * 120.00111 * 5.12736 * 6 5 4 8 8 C 1.50701 * 119.99739 * 185.11879 * 6 5 4 9 9 C 1.50693 * 109.47102 * 174.95835 * 8 6 5 10 10 C 1.39320 * 120.06472 * 83.40609 * 9 8 6 11 11 C 1.48392 * 120.11811 * 0.02562 * 10 9 8 12 12 C 1.39338 * 120.12484 * 236.61937 * 11 10 9 13 13 C 1.38012 * 119.88057 * 179.76242 * 12 11 10 14 14 C 1.38317 * 120.12072 * 0.49000 * 13 12 11 15 15 C 1.50710 * 119.87899 * 179.74280 * 14 13 12 16 16 O 1.42896 * 109.47098 * 120.01809 * 15 14 13 17 17 Si 1.86295 * 109.46857 * 0.02562 * 15 14 13 18 18 C 1.38326 * 120.24439 * 359.76106 * 14 13 12 19 19 C 1.38010 * 120.12055 * 0.02562 * 18 14 13 20 20 C 1.39358 * 119.76227 * 179.75141 * 10 9 8 21 21 C 1.37990 * 119.87323 * 0.56773 * 20 10 9 22 22 C 1.38342 * 120.12572 * 359.68277 * 21 20 10 23 23 C 1.38038 * 120.06357 * 263.68468 * 9 8 6 24 24 C 1.53782 * 113.61509 * 203.74966 * 4 2 1 25 25 C 1.53782 * 87.17462 * 270.76139 * 24 4 2 26 26 H 1.09004 * 113.61228 * 89.15924 * 25 24 4 27 27 O 1.42897 * 113.61340 * 220.06336 * 25 24 4 28 28 C 1.53785 * 113.68408 * 106.21694 * 4 2 1 29 29 H 0.97002 * 120.00045 * 184.99310 * 1 2 3 30 30 H 0.96999 * 120.00360 * 5.00353 * 1 2 3 31 31 H 0.97000 * 119.99980 * 104.56415 * 5 4 2 32 32 H 1.09009 * 109.46999 * 294.95712 * 8 6 5 33 33 H 1.08995 * 109.47324 * 54.95672 * 8 6 5 34 34 H 1.08004 * 120.05414 * 359.97180 * 12 11 10 35 35 H 1.08002 * 119.94122 * 180.22767 * 13 12 11 36 36 H 1.08999 * 109.46830 * 240.02318 * 15 14 13 37 37 H 0.96704 * 114.00340 * 300.00257 * 16 15 14 38 38 H 1.48501 * 110.00277 * 58.68056 * 17 15 14 39 39 H 1.48501 * 110.00208 * 180.02562 * 17 15 14 40 40 H 1.08000 * 119.93908 * 179.97438 * 18 14 13 41 41 H 1.07997 * 120.06276 * 179.97438 * 19 18 14 42 42 H 1.07995 * 120.06097 * 180.27405 * 20 10 9 43 43 H 1.08006 * 119.93999 * 179.69974 * 21 20 10 44 44 H 1.08000 * 119.88270 * 179.97438 * 22 21 20 45 45 H 1.08003 * 119.94174 * 359.97438 * 23 9 8 46 46 H 1.08999 * 113.61201 * 25.35468 * 24 4 2 47 47 H 1.09001 * 113.60775 * 156.17004 * 24 4 2 48 48 H 0.96700 * 113.99553 * 180.02562 * 27 25 24 49 49 H 1.09006 * 113.60961 * 203.67493 * 28 4 2 50 50 H 1.08999 * 113.61723 * 334.57729 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1013 -1.3050 0.0006 5 7 1.3266 -2.4090 0.5726 6 6 1.1599 -2.4946 1.9073 7 8 1.5708 -1.6098 2.6277 8 6 0.4628 -3.6899 2.5044 9 6 0.5159 -3.6031 4.0079 10 6 -0.4242 -2.8395 4.6966 11 6 -1.4805 -2.1100 3.9522 12 6 -1.6192 -0.7320 4.1052 13 6 -2.6002 -0.0579 3.4067 14 6 -3.4515 -0.7492 2.5637 15 6 -4.5246 -0.0085 1.8080 16 8 -4.3262 -0.1845 0.4039 17 14 -4.4381 1.8052 2.2247 18 6 -3.3217 -2.1180 2.4119 19 6 -2.3414 -2.8015 3.1022 20 6 -0.3724 -2.7678 6.0873 21 6 0.6158 -3.4432 6.7740 22 6 1.5499 -4.1958 6.0849 23 6 1.4995 -4.2753 4.7051 24 6 3.5263 -1.1934 0.5680 25 6 3.9888 -0.8703 -0.8626 26 1 3.9613 0.1931 -1.1007 27 8 5.2279 -1.4877 -1.2167 28 6 2.7508 -1.6439 -1.3516 29 1 -0.4850 -0.8369 0.0731 30 1 -0.4850 0.8368 -0.0733 31 1 0.9337 -3.0784 -0.0092 32 1 -0.5771 -3.7046 2.1778 33 1 0.9599 -4.6023 2.1754 34 1 -0.9579 -0.1920 4.7667 35 1 -2.7062 1.0107 3.5218 36 1 -5.5025 -0.3996 2.0887 37 1 -3.4743 0.1418 0.0830 38 1 -3.0986 2.3432 1.8761 39 1 -5.4917 2.5469 1.4863 40 1 -3.9893 -2.6529 1.7527 41 1 -2.2412 -3.8702 2.9833 42 1 -1.1013 -2.1809 6.6263 43 1 0.6599 -3.3845 7.8516 44 1 2.3218 -4.7225 6.6262 45 1 2.2312 -4.8643 4.1721 46 1 3.6547 -0.3659 1.2658 47 1 3.9185 -2.1353 0.9515 48 1 5.5242 -1.2879 -2.1152 49 1 2.9317 -2.7094 -1.4942 50 1 2.2533 -1.1803 -2.2034 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13158394.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:52 Heat of formation + Delta-G solvation = -62.533329 kcal Electronic energy + Delta-G solvation = -37049.716300 eV Core-core repulsion = 32395.353604 eV Total energy + Delta-G solvation = -4654.362696 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.161 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.32382 -41.31974 -40.16439 -39.42848 -38.86356 -37.74995 -36.37278 -34.88817 -34.41408 -33.84921 -33.28709 -32.03961 -30.76320 -29.00120 -27.11803 -26.71857 -26.23098 -24.07719 -23.53383 -23.15903 -22.59238 -21.82159 -21.30049 -20.41566 -19.19775 -18.70760 -18.43064 -18.26312 -17.91273 -17.67246 -17.09403 -16.90990 -16.56146 -16.42627 -16.29196 -16.06545 -15.90949 -15.56722 -15.46975 -15.41091 -14.96259 -14.83586 -14.61584 -14.53907 -14.18608 -14.09011 -13.80904 -13.69724 -13.63616 -13.34118 -13.28454 -13.21808 -13.05036 -12.46528 -12.45124 -12.30734 -12.08883 -11.81882 -11.76527 -11.67632 -11.46676 -11.02668 -10.86318 -10.74861 -10.71071 -10.21396 -10.17522 -9.99085 -9.74369 -9.24896 -5.01506 -0.12468 0.33600 0.39774 0.59862 1.21587 1.40656 1.53233 1.54025 1.88039 1.89768 2.31763 2.56910 2.84812 3.09799 3.21721 3.24069 3.42567 3.46349 3.57602 3.60986 3.68389 3.70799 3.81380 3.84236 3.91273 3.97528 4.13030 4.17236 4.21024 4.29052 4.33666 4.41781 4.44845 4.48654 4.54563 4.56049 4.64524 4.76656 4.81449 4.91073 4.93827 4.98037 5.04507 5.06986 5.21993 5.31122 5.38530 5.41061 5.51118 5.58787 5.64160 5.66714 5.87854 6.02344 6.17933 6.25457 6.28209 6.63323 7.08090 7.16705 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.845 5.845 2 C 0.540 3.460 3 O -0.529 6.529 4 C 0.129 3.871 5 N -0.724 5.724 6 C 0.516 3.484 7 O -0.504 6.504 8 C -0.112 4.112 9 C -0.056 4.056 10 C -0.034 4.034 11 C -0.033 4.033 12 C -0.090 4.090 13 C -0.112 4.112 14 C -0.119 4.119 15 C -0.073 4.073 16 O -0.528 6.528 17 Si 0.678 3.322 18 C -0.092 4.092 19 C -0.117 4.117 20 C -0.104 4.104 21 C -0.115 4.115 22 C -0.114 4.114 23 C -0.106 4.106 24 C -0.099 4.099 25 C 0.081 3.919 26 H 0.099 0.901 27 O -0.555 6.555 28 C -0.154 4.154 29 H 0.400 0.600 30 H 0.402 0.598 31 H 0.405 0.595 32 H 0.111 0.889 33 H 0.104 0.896 34 H 0.127 0.873 35 H 0.127 0.873 36 H 0.120 0.880 37 H 0.371 0.629 38 H -0.259 1.259 39 H -0.256 1.256 40 H 0.128 0.872 41 H 0.127 0.873 42 H 0.125 0.875 43 H 0.125 0.875 44 H 0.124 0.876 45 H 0.123 0.877 46 H 0.091 0.909 47 H 0.100 0.900 48 H 0.381 0.619 49 H 0.110 0.890 50 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.042 -5.009 -1.121 5.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.408 5.408 2 C 0.323 3.677 3 O -0.404 6.404 4 C 0.038 3.962 5 N -0.381 5.381 6 C 0.302 3.698 7 O -0.377 6.377 8 C -0.151 4.151 9 C -0.056 4.056 10 C -0.034 4.034 11 C -0.033 4.033 12 C -0.108 4.108 13 C -0.129 4.129 14 C -0.119 4.119 15 C -0.183 4.183 16 O -0.333 6.333 17 Si 0.580 3.420 18 C -0.110 4.110 19 C -0.135 4.135 20 C -0.122 4.122 21 C -0.133 4.133 22 C -0.132 4.132 23 C -0.124 4.124 24 C -0.137 4.137 25 C 0.022 3.978 26 H 0.117 0.883 27 O -0.360 6.360 28 C -0.193 4.193 29 H 0.228 0.772 30 H 0.233 0.767 31 H 0.240 0.760 32 H 0.129 0.871 33 H 0.123 0.877 34 H 0.145 0.855 35 H 0.144 0.856 36 H 0.138 0.862 37 H 0.218 0.782 38 H -0.184 1.184 39 H -0.181 1.181 40 H 0.146 0.854 41 H 0.145 0.855 42 H 0.143 0.857 43 H 0.143 0.857 44 H 0.142 0.858 45 H 0.141 0.859 46 H 0.110 0.890 47 H 0.118 0.882 48 H 0.229 0.771 49 H 0.128 0.872 50 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -2.691 -3.440 -0.222 4.373 hybrid contribution -0.067 -0.608 -1.682 1.790 sum -2.758 -4.048 -1.904 5.255 Atomic orbital electron populations 1.43677 1.07099 1.12953 1.77061 1.20006 0.82801 0.90074 0.74852 1.90781 1.68160 1.32401 1.49020 1.21483 0.91422 0.85520 0.97736 1.45982 1.56293 1.28389 1.07414 1.20632 0.79489 0.88045 0.81639 1.90794 1.47651 1.39528 1.59681 1.20870 1.03383 0.97573 0.93285 1.19149 0.95732 0.97684 0.93038 1.18520 0.94924 0.96992 0.92961 1.18794 0.94760 0.93143 0.96560 1.21163 0.97347 0.93239 0.99042 1.20951 0.95444 0.99431 0.97122 1.20294 0.97812 0.94800 0.98993 1.24999 1.00175 1.10771 0.82377 1.86623 1.41484 1.83931 1.21277 0.94823 0.80971 0.74408 0.91832 1.20913 0.97813 0.93377 0.98888 1.21242 0.95442 0.99823 0.96959 1.21176 0.98713 0.99466 0.92834 1.21133 0.94855 0.97099 1.00177 1.21197 0.98890 0.98955 0.94179 1.20934 0.97488 0.99545 0.94463 1.23136 0.89793 1.04433 0.96369 1.23289 0.82238 0.96469 0.95848 0.88325 1.86529 1.38604 1.74296 1.36567 1.24007 0.97460 1.03526 0.94302 0.77171 0.76691 0.75951 0.87091 0.87728 0.85502 0.85575 0.86243 0.78164 1.18380 1.18110 0.85416 0.85500 0.85706 0.85673 0.85765 0.85918 0.89004 0.88183 0.77089 0.87199 0.89933 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.80 8.83 31.22 0.28 1.08 16 2 C 0.54 1.19 7.00 -10.99 -0.08 1.11 16 3 O -0.53 -3.28 16.08 5.55 0.09 -3.19 16 4 C 0.13 0.01 1.12 -132.16 -0.15 -0.14 16 5 N -0.72 1.68 4.34 -47.92 -0.21 1.47 16 6 C 0.52 0.05 7.44 -10.98 -0.08 -0.03 16 7 O -0.50 -2.27 15.02 5.56 0.08 -2.19 16 8 C -0.11 0.22 5.32 -29.04 -0.15 0.07 16 9 C -0.06 -0.03 4.40 -104.30 -0.46 -0.49 16 10 C -0.03 -0.04 5.34 -104.90 -0.56 -0.60 16 11 C -0.03 -0.01 4.87 -104.89 -0.51 -0.52 16 12 C -0.09 -0.06 9.63 -39.26 -0.38 -0.44 16 13 C -0.11 0.05 8.65 -39.64 -0.34 -0.29 16 14 C -0.12 0.13 5.40 -104.56 -0.56 -0.43 16 15 C -0.07 0.10 2.82 36.01 0.10 0.20 16 16 O -0.53 0.30 12.76 -35.23 -0.45 -0.15 16 17 Si 0.68 -0.81 29.78 -169.99 -5.06 -5.87 16 18 C -0.09 0.12 9.59 -39.63 -0.38 -0.26 16 19 C -0.12 0.14 7.77 -39.25 -0.30 -0.17 16 20 C -0.10 -0.10 9.63 -39.26 -0.38 -0.48 16 21 C -0.11 -0.07 10.03 -39.63 -0.40 -0.47 16 22 C -0.11 -0.06 10.04 -39.52 -0.40 -0.46 16 23 C -0.11 -0.06 9.67 -39.63 -0.38 -0.44 16 24 C -0.10 -0.23 5.81 -25.92 -0.15 -0.38 16 25 C 0.08 0.07 4.81 -25.83 -0.12 -0.05 16 26 H 0.10 0.17 7.33 -51.93 -0.38 -0.21 16 27 O -0.55 -0.54 13.67 -35.23 -0.48 -1.02 16 28 C -0.15 0.25 7.25 -25.82 -0.19 0.07 16 29 H 0.40 -1.23 8.04 -40.82 -0.33 -1.56 16 30 H 0.40 -0.57 8.93 -40.82 -0.36 -0.94 16 31 H 0.40 -2.24 8.76 -40.82 -0.36 -2.60 16 32 H 0.11 -0.39 4.77 -51.92 -0.25 -0.64 16 33 H 0.10 -0.44 8.04 -51.93 -0.42 -0.85 16 34 H 0.13 0.12 8.06 -52.48 -0.42 -0.30 16 35 H 0.13 -0.20 4.86 -52.49 -0.26 -0.45 16 36 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 37 H 0.37 -1.27 8.70 45.56 0.40 -0.88 16 38 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 39 H -0.26 -0.56 7.11 56.52 0.40 -0.15 16 40 H 0.13 -0.26 8.06 -52.49 -0.42 -0.69 16 41 H 0.13 -0.33 7.17 -52.49 -0.38 -0.71 16 42 H 0.12 -0.03 8.06 -52.49 -0.42 -0.46 16 43 H 0.13 -0.14 8.06 -52.48 -0.42 -0.57 16 44 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 45 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 46 H 0.09 0.46 7.85 -51.93 -0.41 0.05 16 47 H 0.10 0.25 8.14 -51.93 -0.42 -0.17 16 48 H 0.38 -1.24 9.12 45.56 0.42 -0.83 16 49 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 50 H 0.08 -0.20 8.10 -51.93 -0.42 -0.62 16 LS Contribution 415.56 15.07 6.26 6.26 Total: 0.00 -11.58 415.56 -11.11 -22.69 By element: Atomic # 1 Polarization: -9.14 SS G_CDS: -5.74 Total: -14.88 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -5.88 Total: -4.20 kcal Atomic # 7 Polarization: 2.48 SS G_CDS: 0.07 Total: 2.55 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -0.76 Total: -6.55 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.06 Total: -5.87 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -11.58 -11.11 -22.69 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13158394.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.845 kcal (2) G-P(sol) polarization free energy of solvation -11.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.428 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.105 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.688 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.533 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds