Wall clock time and date at job start Sun Mar 7 2021 04:58:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34780 * 1 3 3 O 1.21284 * 119.99758 * 2 1 4 4 C 1.50695 * 120.00200 * 179.97438 * 2 1 3 5 5 N 1.46500 * 112.85055 * 334.95402 * 4 2 1 6 6 C 1.34779 * 119.99580 * 284.55607 * 5 4 2 7 7 O 1.21275 * 120.00111 * 5.12736 * 6 5 4 8 8 C 1.50701 * 119.99739 * 185.11879 * 6 5 4 9 9 C 1.50693 * 109.47102 * 174.95835 * 8 6 5 10 10 C 1.39320 * 120.06472 * 83.40609 * 9 8 6 11 11 C 1.48392 * 120.11811 * 0.02562 * 10 9 8 12 12 C 1.39338 * 120.12484 * 236.61937 * 11 10 9 13 13 C 1.38012 * 119.88057 * 179.76242 * 12 11 10 14 14 C 1.38317 * 120.12072 * 0.49000 * 13 12 11 15 15 C 1.50710 * 119.87899 * 179.74280 * 14 13 12 16 16 O 1.42896 * 109.47098 * 120.01809 * 15 14 13 17 17 Si 1.86295 * 109.46857 * 0.02562 * 15 14 13 18 18 C 1.38326 * 120.24439 * 359.76106 * 14 13 12 19 19 C 1.38010 * 120.12055 * 0.02562 * 18 14 13 20 20 C 1.39358 * 119.76227 * 179.75141 * 10 9 8 21 21 C 1.37990 * 119.87323 * 0.56773 * 20 10 9 22 22 C 1.38342 * 120.12572 * 359.68277 * 21 20 10 23 23 C 1.38038 * 120.06357 * 263.68468 * 9 8 6 24 24 C 1.53782 * 113.61509 * 203.74966 * 4 2 1 25 25 C 1.53782 * 87.17462 * 270.76139 * 24 4 2 26 26 H 1.09004 * 113.61228 * 89.15924 * 25 24 4 27 27 O 1.42897 * 113.61340 * 220.06336 * 25 24 4 28 28 C 1.53785 * 113.68408 * 106.21694 * 4 2 1 29 29 H 0.97002 * 120.00045 * 184.99310 * 1 2 3 30 30 H 0.96999 * 120.00360 * 5.00353 * 1 2 3 31 31 H 0.97000 * 119.99980 * 104.56415 * 5 4 2 32 32 H 1.09009 * 109.46999 * 294.95712 * 8 6 5 33 33 H 1.08995 * 109.47324 * 54.95672 * 8 6 5 34 34 H 1.08004 * 120.05414 * 359.97180 * 12 11 10 35 35 H 1.08002 * 119.94122 * 180.22767 * 13 12 11 36 36 H 1.08999 * 109.46830 * 240.02318 * 15 14 13 37 37 H 0.96704 * 114.00340 * 300.00257 * 16 15 14 38 38 H 1.48501 * 110.00277 * 58.68056 * 17 15 14 39 39 H 1.48501 * 110.00208 * 180.02562 * 17 15 14 40 40 H 1.08000 * 119.93908 * 179.97438 * 18 14 13 41 41 H 1.07997 * 120.06276 * 179.97438 * 19 18 14 42 42 H 1.07995 * 120.06097 * 180.27405 * 20 10 9 43 43 H 1.08006 * 119.93999 * 179.69974 * 21 20 10 44 44 H 1.08000 * 119.88270 * 179.97438 * 22 21 20 45 45 H 1.08003 * 119.94174 * 359.97438 * 23 9 8 46 46 H 1.08999 * 113.61201 * 25.35468 * 24 4 2 47 47 H 1.09001 * 113.60775 * 156.17004 * 24 4 2 48 48 H 0.96700 * 113.99553 * 180.02562 * 27 25 24 49 49 H 1.09006 * 113.60961 * 203.67493 * 28 4 2 50 50 H 1.08999 * 113.61723 * 334.57729 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1013 -1.3050 0.0006 5 7 1.3266 -2.4090 0.5726 6 6 1.1599 -2.4946 1.9073 7 8 1.5708 -1.6098 2.6277 8 6 0.4628 -3.6899 2.5044 9 6 0.5159 -3.6031 4.0079 10 6 -0.4242 -2.8395 4.6966 11 6 -1.4805 -2.1100 3.9522 12 6 -1.6192 -0.7320 4.1052 13 6 -2.6002 -0.0579 3.4067 14 6 -3.4515 -0.7492 2.5637 15 6 -4.5246 -0.0085 1.8080 16 8 -4.3262 -0.1845 0.4039 17 14 -4.4381 1.8052 2.2247 18 6 -3.3217 -2.1180 2.4119 19 6 -2.3414 -2.8015 3.1022 20 6 -0.3724 -2.7678 6.0873 21 6 0.6158 -3.4432 6.7740 22 6 1.5499 -4.1958 6.0849 23 6 1.4995 -4.2753 4.7051 24 6 3.5263 -1.1934 0.5680 25 6 3.9888 -0.8703 -0.8626 26 1 3.9613 0.1931 -1.1007 27 8 5.2279 -1.4877 -1.2167 28 6 2.7508 -1.6439 -1.3516 29 1 -0.4850 -0.8369 0.0731 30 1 -0.4850 0.8368 -0.0733 31 1 0.9337 -3.0784 -0.0092 32 1 -0.5771 -3.7046 2.1778 33 1 0.9599 -4.6023 2.1754 34 1 -0.9579 -0.1920 4.7667 35 1 -2.7062 1.0107 3.5218 36 1 -5.5025 -0.3996 2.0887 37 1 -3.4743 0.1418 0.0830 38 1 -3.0986 2.3432 1.8761 39 1 -5.4917 2.5469 1.4863 40 1 -3.9893 -2.6529 1.7527 41 1 -2.2412 -3.8702 2.9833 42 1 -1.1013 -2.1809 6.6263 43 1 0.6599 -3.3845 7.8516 44 1 2.3218 -4.7225 6.6262 45 1 2.2312 -4.8643 4.1721 46 1 3.6547 -0.3659 1.2658 47 1 3.9185 -2.1353 0.9515 48 1 5.5242 -1.2879 -2.1152 49 1 2.9317 -2.7094 -1.4942 50 1 2.2533 -1.1803 -2.2034 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_13158394.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:50 Heat of formation + Delta-G solvation = -68.421610 kcal Electronic energy + Delta-G solvation = -37049.971635 eV Core-core repulsion = 32395.353604 eV Total energy + Delta-G solvation = -4654.618031 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.161 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -42.37852 -41.28825 -40.16531 -39.45403 -38.96320 -37.67554 -36.43727 -34.96864 -34.39551 -33.84979 -33.24085 -31.95957 -30.72077 -28.94737 -27.15568 -26.66942 -26.24681 -24.02892 -23.50139 -23.17936 -22.60439 -21.77652 -21.25828 -20.49992 -19.21899 -18.64792 -18.44367 -18.23854 -17.86665 -17.73457 -17.03625 -16.91950 -16.55165 -16.37726 -16.22392 -16.16088 -15.86339 -15.55610 -15.53090 -15.44385 -15.02856 -14.83347 -14.67529 -14.46510 -14.13164 -14.10432 -13.76122 -13.65104 -13.59315 -13.35546 -13.27985 -13.22441 -13.00804 -12.55851 -12.37666 -12.33660 -12.05407 -11.86136 -11.76735 -11.63754 -11.59215 -11.05658 -10.91973 -10.85542 -10.64834 -10.25592 -10.13670 -9.91761 -9.73598 -9.21432 -4.96272 -0.07890 0.40150 0.40834 0.62224 1.27855 1.28618 1.54494 1.55175 1.89712 1.92683 2.28365 2.63135 2.86803 3.09568 3.22169 3.39414 3.42569 3.53184 3.57004 3.65455 3.72769 3.76677 3.91586 3.96416 3.98603 4.04479 4.16726 4.18819 4.32376 4.39878 4.51764 4.52530 4.54376 4.57760 4.59356 4.63587 4.70814 4.74669 4.79333 4.88566 4.93691 5.00064 5.05140 5.11132 5.23922 5.36707 5.43488 5.49617 5.54225 5.59562 5.64656 5.67130 5.95399 6.05980 6.19163 6.44235 6.46576 6.79734 7.07394 7.19907 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.828 5.828 2 C 0.533 3.467 3 O -0.578 6.578 4 C 0.135 3.865 5 N -0.704 5.704 6 C 0.516 3.484 7 O -0.553 6.553 8 C -0.107 4.107 9 C -0.065 4.065 10 C -0.046 4.046 11 C -0.038 4.038 12 C -0.108 4.108 13 C -0.117 4.117 14 C -0.116 4.116 15 C -0.066 4.066 16 O -0.538 6.538 17 Si 0.736 3.264 18 C -0.086 4.086 19 C -0.112 4.112 20 C -0.121 4.121 21 C -0.127 4.127 22 C -0.127 4.127 23 C -0.118 4.118 24 C -0.108 4.108 25 C 0.079 3.921 26 H 0.083 0.917 27 O -0.569 6.569 28 C -0.130 4.130 29 H 0.413 0.587 30 H 0.405 0.595 31 H 0.426 0.574 32 H 0.131 0.869 33 H 0.134 0.866 34 H 0.112 0.888 35 H 0.130 0.870 36 H 0.131 0.869 37 H 0.383 0.617 38 H -0.289 1.289 39 H -0.302 1.302 40 H 0.143 0.857 41 H 0.146 0.854 42 H 0.128 0.872 43 H 0.136 0.864 44 H 0.137 0.863 45 H 0.138 0.862 46 H 0.053 0.947 47 H 0.097 0.903 48 H 0.399 0.601 49 H 0.132 0.868 50 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.193 -7.541 -2.726 9.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.391 5.391 2 C 0.316 3.684 3 O -0.457 6.457 4 C 0.044 3.956 5 N -0.362 5.362 6 C 0.304 3.696 7 O -0.429 6.429 8 C -0.146 4.146 9 C -0.065 4.065 10 C -0.046 4.046 11 C -0.038 4.038 12 C -0.126 4.126 13 C -0.134 4.134 14 C -0.116 4.116 15 C -0.177 4.177 16 O -0.346 6.346 17 Si 0.643 3.357 18 C -0.104 4.104 19 C -0.130 4.130 20 C -0.139 4.139 21 C -0.145 4.145 22 C -0.145 4.145 23 C -0.136 4.136 24 C -0.147 4.147 25 C 0.019 3.981 26 H 0.101 0.899 27 O -0.378 6.378 28 C -0.169 4.169 29 H 0.243 0.757 30 H 0.237 0.763 31 H 0.265 0.735 32 H 0.149 0.851 33 H 0.152 0.848 34 H 0.130 0.870 35 H 0.148 0.852 36 H 0.149 0.851 37 H 0.232 0.768 38 H -0.216 1.216 39 H -0.230 1.230 40 H 0.161 0.839 41 H 0.164 0.836 42 H 0.146 0.854 43 H 0.154 0.846 44 H 0.155 0.845 45 H 0.156 0.844 46 H 0.071 0.929 47 H 0.115 0.885 48 H 0.249 0.751 49 H 0.150 0.850 50 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -3.880 -6.031 -1.857 7.408 hybrid contribution 0.316 0.258 -1.164 1.234 sum -3.564 -5.773 -3.021 7.427 Atomic orbital electron populations 1.43561 1.06242 1.13858 1.75443 1.20415 0.83573 0.90220 0.74177 1.90759 1.69251 1.34204 1.51441 1.21247 0.90280 0.85390 0.98633 1.45769 1.55419 1.27967 1.07047 1.21047 0.78732 0.87951 0.81891 1.90798 1.49787 1.41399 1.60950 1.20944 1.04574 0.97514 0.91519 1.19435 0.95330 0.97238 0.94502 1.18738 0.95548 0.97226 0.93126 1.18829 0.95062 0.92886 0.97027 1.21152 0.97901 0.93808 0.99722 1.21004 0.95422 0.99715 0.97287 1.20284 0.97518 0.95115 0.98680 1.24932 1.00683 1.09848 0.82207 1.86599 1.42606 1.83960 1.21421 0.94101 0.77081 0.73648 0.90862 1.21072 0.97635 0.93084 0.98624 1.21405 0.94791 1.00666 0.96141 1.21370 0.99209 0.99925 0.93375 1.21357 0.94949 0.97225 1.00952 1.21464 0.99239 0.99158 0.94676 1.21235 0.97866 0.99829 0.94681 1.23101 0.92202 1.02747 0.96623 1.23176 0.83512 0.96242 0.95131 0.89879 1.86481 1.38763 1.74272 1.38271 1.23916 0.95042 1.04457 0.93448 0.75661 0.76340 0.73462 0.85136 0.84806 0.87019 0.85221 0.85132 0.76803 1.21604 1.22985 0.83922 0.83594 0.85416 0.84573 0.84517 0.84397 0.92858 0.88462 0.75057 0.84957 0.88383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 1.69 8.83 -173.53 -1.53 0.16 16 2 C 0.53 2.79 7.00 87.66 0.61 3.40 16 3 O -0.58 -8.51 16.08 -3.04 -0.05 -8.56 16 4 C 0.14 0.00 1.12 3.38 0.00 0.01 16 5 N -0.70 4.28 4.34 -423.92 -1.84 2.44 16 6 C 0.52 -0.21 7.44 87.66 0.65 0.45 16 7 O -0.55 -5.67 15.02 -3.01 -0.05 -5.72 16 8 C -0.11 0.61 5.32 29.10 0.15 0.76 16 9 C -0.06 -0.05 4.40 -19.65 -0.09 -0.14 16 10 C -0.05 -0.13 5.34 -20.04 -0.11 -0.23 16 11 C -0.04 -0.02 4.87 -20.04 -0.10 -0.12 16 12 C -0.11 -0.26 9.63 22.48 0.22 -0.05 16 13 C -0.12 0.07 8.65 22.23 0.19 0.26 16 14 C -0.12 0.37 5.40 -19.82 -0.11 0.27 16 15 C -0.07 0.25 2.82 71.24 0.20 0.45 16 16 O -0.54 1.40 12.76 -148.98 -1.90 -0.50 16 17 Si 0.74 -1.29 29.78 68.60 2.04 0.75 16 18 C -0.09 0.41 9.59 22.24 0.21 0.62 16 19 C -0.11 0.45 7.77 22.48 0.17 0.63 16 20 C -0.12 -0.40 9.63 22.48 0.22 -0.19 16 21 C -0.13 -0.30 10.03 22.24 0.22 -0.07 16 22 C -0.13 -0.22 10.04 22.31 0.22 0.01 16 23 C -0.12 -0.12 9.67 22.24 0.21 0.09 16 24 C -0.11 -0.69 5.81 31.12 0.18 -0.51 16 25 C 0.08 0.20 4.81 31.18 0.15 0.35 16 26 H 0.08 0.46 7.33 -2.39 -0.02 0.44 16 27 O -0.57 -1.16 13.67 -148.98 -2.04 -3.20 16 28 C -0.13 0.61 7.25 31.18 0.23 0.84 16 29 H 0.41 -3.09 8.04 -92.71 -0.75 -3.84 16 30 H 0.41 -1.06 8.93 -92.71 -0.83 -1.89 16 31 H 0.43 -6.05 8.76 -92.71 -0.81 -6.86 16 32 H 0.13 -1.28 4.77 -2.38 -0.01 -1.29 16 33 H 0.13 -1.54 8.04 -2.39 -0.02 -1.56 16 34 H 0.11 0.53 8.06 -2.91 -0.02 0.50 16 35 H 0.13 -0.28 4.86 -2.91 -0.01 -0.30 16 36 H 0.13 -0.71 7.96 -2.39 -0.02 -0.73 16 37 H 0.38 -3.13 8.70 -74.05 -0.64 -3.78 16 38 H -0.29 -0.91 7.11 99.48 0.71 -0.21 16 39 H -0.30 -1.81 7.11 99.48 0.71 -1.10 16 40 H 0.14 -1.04 8.06 -2.91 -0.02 -1.07 16 41 H 0.15 -1.17 7.17 -2.91 -0.02 -1.19 16 42 H 0.13 0.17 8.06 -2.91 -0.02 0.15 16 43 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 44 H 0.14 -0.26 8.06 -2.91 -0.02 -0.29 16 45 H 0.14 -0.41 8.06 -2.91 -0.02 -0.44 16 46 H 0.05 0.74 7.85 -2.39 -0.02 0.72 16 47 H 0.10 0.61 8.14 -2.39 -0.02 0.59 16 48 H 0.40 -2.72 9.12 -74.06 -0.68 -3.40 16 49 H 0.13 -1.16 8.14 -2.38 -0.02 -1.18 16 50 H 0.10 -0.69 8.10 -2.39 -0.02 -0.71 16 Total: 0.00 -30.88 415.56 -4.51 -35.40 By element: Atomic # 1 Polarization: -24.99 SS G_CDS: -2.61 Total: -27.60 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: 3.46 Total: 6.83 kcal Atomic # 7 Polarization: 5.97 SS G_CDS: -3.37 Total: 2.59 kcal Atomic # 8 Polarization: -13.95 SS G_CDS: -4.03 Total: -17.98 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: 2.04 Total: 0.75 kcal Total: -30.88 -4.51 -35.40 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13158394.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.025 kcal (2) G-P(sol) polarization free energy of solvation -30.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.907 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.515 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.422 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds