Wall clock time and date at job start Sun Mar 7 2021 04:58:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34781 * 1 3 3 O 1.21283 * 120.00196 * 2 1 4 4 C 1.50703 * 119.99959 * 179.97438 * 2 1 3 5 5 N 1.46500 * 112.84441 * 35.34783 * 4 2 1 6 6 C 1.34774 * 120.00324 * 57.93839 * 5 4 2 7 7 O 1.21581 * 120.00158 * 354.80298 * 6 5 4 8 8 C 1.47653 * 119.99972 * 174.79733 * 6 5 4 9 9 C 1.40172 * 119.97502 * 359.72564 * 8 6 5 10 10 C 1.36349 * 120.66909 * 179.75488 * 9 8 6 11 11 C 1.39327 * 120.23811 * 0.52184 * 10 9 8 12 12 N 1.37408 * 133.25391 * 179.76770 * 11 10 9 13 13 C 1.36864 * 109.97832 * 179.97438 * 12 11 10 14 14 C 1.34196 * 109.96957 * 359.97438 * 13 12 11 15 15 C 1.50700 * 126.53869 * 179.97438 * 14 13 12 16 16 O 1.42898 * 109.47331 * 105.02589 * 15 14 13 17 17 Si 1.86303 * 109.47244 * 345.02244 * 15 14 13 18 18 C 1.40906 * 119.63834 * 359.73611 * 11 10 9 19 19 C 1.39186 * 119.97280 * 180.02562 * 8 6 5 20 20 C 1.53775 * 113.61837 * 264.14726 * 4 2 1 21 21 C 1.53779 * 87.08203 * 270.88629 * 20 4 2 22 22 H 1.09002 * 113.61537 * 89.11590 * 21 20 4 23 23 O 1.42900 * 113.61231 * 220.01480 * 21 20 4 24 24 C 1.53784 * 113.61287 * 166.53835 * 4 2 1 25 25 H 0.96997 * 119.99403 * 354.98460 * 1 2 3 26 26 H 0.97001 * 119.99942 * 174.70869 * 1 2 3 27 27 H 0.97006 * 119.99246 * 237.93509 * 5 4 2 28 28 H 1.08000 * 119.66147 * 359.97438 * 9 8 6 29 29 H 1.07997 * 119.87970 * 180.24107 * 10 9 8 30 30 H 0.96997 * 125.00778 * 0.02562 * 12 11 10 31 31 H 1.07997 * 125.01394 * 179.97438 * 13 12 11 32 32 H 1.09003 * 109.46747 * 225.02773 * 15 14 13 33 33 H 0.96697 * 113.99794 * 300.00029 * 16 15 14 34 34 H 1.48496 * 109.99722 * 180.02562 * 17 15 14 35 35 H 1.48493 * 110.00299 * 301.32021 * 17 15 14 36 36 H 1.07998 * 120.30594 * 359.95649 * 19 8 6 37 37 H 1.09001 * 113.61203 * 25.43331 * 20 4 2 38 38 H 1.09002 * 113.61506 * 156.33272 * 20 4 2 39 39 H 0.96702 * 114.00127 * 179.97438 * 23 21 20 40 40 H 1.09001 * 113.61132 * 203.66706 * 24 4 2 41 41 H 1.08997 * 113.61499 * 334.57389 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9543 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 7 1.4320 -2.3486 -0.7800 6 6 1.1643 -2.1466 -2.0854 7 8 1.3917 -1.0652 -2.5923 8 6 0.5950 -3.2387 -2.8999 9 6 0.3385 -4.4871 -2.3163 10 6 -0.1917 -5.5039 -3.0540 11 6 -0.4758 -5.3164 -4.4051 12 7 -0.9956 -6.1333 -5.3801 13 6 -1.0755 -5.4541 -6.5656 14 6 -0.6219 -4.2010 -6.4073 15 6 -0.5420 -3.1349 -7.4694 16 8 -1.5844 -2.1792 -7.2643 17 14 -0.7374 -3.9161 -9.1494 18 6 -0.2176 -4.0677 -5.0047 19 6 0.3192 -3.0296 -4.2480 20 6 2.5338 -1.7662 1.4024 21 6 3.8247 -0.9597 1.1836 22 1 3.7508 0.0787 1.5066 23 8 4.9975 -1.6126 1.6736 24 6 3.5961 -1.1536 -0.3275 25 1 -0.4849 0.8369 0.0734 26 1 -0.4850 -0.8365 -0.0775 27 1 1.1816 -3.1850 -0.3573 28 1 0.5598 -4.6440 -1.2710 29 1 -0.3878 -6.4594 -2.5905 30 1 -1.2666 -7.0552 -5.2475 31 1 -1.4485 -5.8657 -7.4917 32 1 0.4252 -2.6357 -7.4111 33 1 -2.4749 -2.5541 -7.3028 34 1 -0.6598 -2.8751 -10.2056 35 1 0.3220 -4.9347 -9.3622 36 1 0.5191 -2.0706 -4.7028 37 1 1.9058 -1.3762 2.2034 38 1 2.6979 -2.8412 1.4772 39 1 5.8128 -1.1104 1.5385 40 1 4.0501 -2.0614 -0.7248 41 1 3.8251 -0.2693 -0.9221 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13287722.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:58:59 Heat of formation + Delta-G solvation = -53.419910 kcal Electronic energy + Delta-G solvation = -28448.015990 eV Core-core repulsion = 24296.150089 eV Total energy + Delta-G solvation = -4151.865900 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.125 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.59543 -42.14181 -40.11203 -38.82986 -37.94756 -37.44154 -36.34469 -34.69760 -33.86789 -33.32068 -30.89638 -30.50417 -27.02822 -26.68352 -26.50760 -24.60635 -23.57607 -22.88269 -21.50339 -20.80832 -20.35516 -19.39501 -19.19932 -18.44448 -18.23732 -17.73305 -17.50521 -17.15290 -16.67569 -16.30997 -15.99655 -15.78088 -15.63691 -15.59628 -15.28230 -15.19845 -14.86499 -14.81747 -14.59872 -14.08870 -13.88512 -13.87730 -13.58948 -13.46659 -13.22971 -12.71696 -12.45031 -12.31637 -12.23215 -11.92133 -11.81589 -11.21680 -11.06798 -10.85771 -10.76657 -10.59248 -10.36107 -10.15394 -9.40834 -8.90309 -5.11379 -0.13731 0.10408 1.27327 1.41374 1.50416 1.62055 1.84825 1.90821 1.96641 1.97958 2.44151 2.87220 3.18373 3.22558 3.42954 3.50948 3.53239 3.64648 3.71650 3.73519 3.76117 3.88705 4.00021 4.18688 4.28968 4.36468 4.43466 4.50917 4.53183 4.57193 4.72978 4.79255 4.94360 4.95519 5.04715 5.16651 5.25011 5.29876 5.43960 5.53175 5.84390 5.90154 6.28854 6.30914 6.40178 6.65647 6.66419 7.15916 7.30197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.844 5.844 2 C 0.547 3.453 3 O -0.529 6.529 4 C 0.129 3.871 5 N -0.718 5.718 6 C 0.563 3.437 7 O -0.519 6.519 8 C -0.170 4.170 9 C -0.067 4.067 10 C -0.133 4.133 11 C 0.120 3.880 12 N -0.585 5.585 13 C 0.062 3.938 14 C -0.191 4.191 15 C -0.035 4.035 16 O -0.539 6.539 17 Si 0.687 3.313 18 C -0.103 4.103 19 C 0.010 3.990 20 C -0.116 4.116 21 C 0.083 3.917 22 H 0.097 0.903 23 O -0.557 6.557 24 C -0.151 4.151 25 H 0.405 0.595 26 H 0.400 0.600 27 H 0.405 0.595 28 H 0.129 0.871 29 H 0.129 0.871 30 H 0.422 0.578 31 H 0.179 0.821 32 H 0.113 0.887 33 H 0.376 0.624 34 H -0.254 1.254 35 H -0.256 1.256 36 H 0.138 0.862 37 H 0.088 0.912 38 H 0.111 0.889 39 H 0.385 0.615 40 H 0.101 0.899 41 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.510 -9.114 0.629 10.668 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.407 5.407 2 C 0.329 3.671 3 O -0.404 6.404 4 C 0.039 3.961 5 N -0.374 5.374 6 C 0.351 3.649 7 O -0.394 6.394 8 C -0.174 4.174 9 C -0.087 4.087 10 C -0.153 4.153 11 C 0.011 3.989 12 N -0.187 5.187 13 C -0.064 4.064 14 C -0.199 4.199 15 C -0.146 4.146 16 O -0.344 6.344 17 Si 0.589 3.411 18 C -0.108 4.108 19 C -0.010 4.010 20 C -0.154 4.154 21 C 0.023 3.977 22 H 0.115 0.885 23 O -0.363 6.363 24 C -0.191 4.191 25 H 0.236 0.764 26 H 0.228 0.772 27 H 0.242 0.758 28 H 0.147 0.853 29 H 0.146 0.854 30 H 0.259 0.741 31 H 0.196 0.804 32 H 0.130 0.870 33 H 0.223 0.777 34 H -0.178 1.178 35 H -0.181 1.181 36 H 0.156 0.844 37 H 0.106 0.894 38 H 0.129 0.871 39 H 0.233 0.767 40 H 0.119 0.881 41 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -4.372 -8.054 -0.336 9.170 hybrid contribution -0.037 -0.507 0.490 0.706 sum -4.409 -8.561 0.154 9.631 Atomic orbital electron populations 1.43651 1.06967 1.13151 1.76945 1.19765 0.82811 0.89767 0.74786 1.90764 1.68178 1.32342 1.49087 1.21531 0.93127 0.87072 0.94372 1.45857 1.62494 1.19099 1.09922 1.18308 0.77475 0.87720 0.81358 1.90868 1.51646 1.25496 1.71416 1.19452 1.08999 0.94374 0.94610 1.20579 0.97211 0.91571 0.99321 1.19671 1.04783 1.00442 0.90435 1.18445 0.98900 0.90721 0.90831 1.41748 1.55312 1.13988 1.07652 1.21698 1.02713 0.92221 0.89800 1.20773 1.09339 0.95543 0.94219 1.24416 0.93776 0.91814 1.04607 1.86542 1.17085 1.35343 1.95448 0.95352 0.88951 0.81392 0.75442 1.18923 1.05073 0.93264 0.93504 1.20703 0.90956 0.97976 0.91345 1.23311 0.95879 1.02824 0.93351 1.23193 0.85369 0.96397 0.92698 0.88544 1.86460 1.17238 1.49100 1.83509 1.23996 0.91982 1.04519 0.98569 0.76372 0.77186 0.75766 0.85342 0.85350 0.74053 0.80395 0.87012 0.77657 1.17812 1.18066 0.84398 0.89355 0.87101 0.76720 0.88086 0.89154 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 -0.36 8.78 31.22 0.27 -0.09 16 2 C 0.55 1.88 5.83 -10.98 -0.06 1.82 16 3 O -0.53 -3.89 16.19 5.55 0.09 -3.80 16 4 C 0.13 0.12 1.10 -132.16 -0.14 -0.02 16 5 N -0.72 0.56 4.63 -48.92 -0.23 0.33 16 6 C 0.56 1.35 7.43 -12.42 -0.09 1.25 16 7 O -0.52 -3.48 15.28 5.29 0.08 -3.40 16 8 C -0.17 -0.21 5.87 -104.98 -0.62 -0.83 16 9 C -0.07 0.10 9.46 -39.54 -0.37 -0.27 16 10 C -0.13 0.21 10.00 -39.86 -0.40 -0.18 16 11 C 0.12 -0.04 7.27 -83.95 -0.61 -0.65 16 12 N -0.58 1.61 6.05 -10.61 -0.06 1.54 16 13 C 0.06 -0.16 10.43 -16.73 -0.17 -0.34 16 14 C -0.19 0.00 5.58 -102.69 -0.57 -0.57 16 15 C -0.03 0.00 3.06 36.01 0.11 0.11 16 16 O -0.54 -0.45 12.88 -35.23 -0.45 -0.90 16 17 Si 0.69 -1.23 30.76 -169.99 -5.23 -6.46 16 18 C -0.10 -0.17 6.34 -105.16 -0.67 -0.84 16 19 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 20 C -0.12 0.10 7.19 -25.92 -0.19 -0.09 16 21 C 0.08 0.08 4.83 -25.78 -0.12 -0.05 16 22 H 0.10 0.16 7.60 -51.93 -0.39 -0.24 16 23 O -0.56 -0.51 13.67 -35.23 -0.48 -0.99 16 24 C -0.15 -0.31 6.90 -25.77 -0.18 -0.49 16 25 H 0.40 -0.11 8.93 -40.82 -0.36 -0.47 16 26 H 0.40 -0.73 8.31 -40.82 -0.34 -1.07 16 27 H 0.41 -1.62 6.69 -40.82 -0.27 -1.90 16 28 H 0.13 -0.61 6.38 -52.49 -0.33 -0.94 16 29 H 0.13 -0.52 8.06 -52.49 -0.42 -0.94 16 30 H 0.42 -2.44 8.96 -40.82 -0.37 -2.80 16 31 H 0.18 -1.11 6.35 -52.49 -0.33 -1.44 16 32 H 0.11 0.15 7.96 -51.93 -0.41 -0.26 16 33 H 0.38 -1.30 8.70 45.56 0.40 -0.90 16 34 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 35 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 36 H 0.14 0.58 7.64 -52.49 -0.40 0.17 16 37 H 0.09 -0.15 8.09 -51.93 -0.42 -0.57 16 38 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 39 H 0.38 -1.02 9.12 45.56 0.42 -0.60 16 40 H 0.10 0.16 8.14 -51.93 -0.42 -0.26 16 41 H 0.09 0.40 7.65 -51.93 -0.40 0.00 16 LS Contribution 350.09 15.07 5.28 5.28 Total: 0.00 -13.82 350.09 -8.89 -22.71 By element: Atomic # 1 Polarization: -9.05 SS G_CDS: -3.69 Total: -12.74 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: -4.47 Total: -1.49 kcal Atomic # 7 Polarization: 1.80 SS G_CDS: -0.02 Total: 1.79 kcal Atomic # 8 Polarization: -8.33 SS G_CDS: -0.76 Total: -9.09 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.23 Total: -6.46 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -13.82 -8.89 -22.71 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13287722.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.709 kcal (2) G-P(sol) polarization free energy of solvation -13.818 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.420 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds