Wall clock time and date at job start Sun Mar 7 2021 04:59:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34780 * 1 3 3 O 1.21281 * 119.99800 * 2 1 4 4 C 1.50698 * 120.00362 * 179.97438 * 2 1 3 5 5 N 1.46503 * 112.84446 * 25.23982 * 4 2 1 6 6 C 1.34783 * 119.99704 * 66.34326 * 5 4 2 7 7 O 1.21510 * 120.00079 * 5.00788 * 6 5 4 8 8 C 1.48166 * 119.99619 * 185.00301 * 6 5 4 9 9 C 1.39266 * 119.72250 * 179.72969 * 8 6 5 10 10 C 1.38628 * 119.06225 * 179.73345 * 9 8 6 11 11 C 1.38580 * 118.49022 * 0.52449 * 10 9 8 12 12 C 1.50701 * 120.32578 * 179.70645 * 11 10 9 13 13 O 1.42896 * 109.47272 * 300.02739 * 12 11 10 14 14 Si 1.86301 * 109.46989 * 180.02562 * 12 11 10 15 15 C 1.38606 * 119.34758 * 359.73805 * 11 10 9 16 16 N 1.31492 * 120.90425 * 359.97438 * 15 11 10 17 17 C 1.53774 * 113.69259 * 253.97829 * 4 2 1 18 18 C 1.53787 * 87.07974 * 270.87153 * 17 4 2 19 19 H 1.08998 * 113.68952 * 89.12521 * 18 17 4 20 20 O 1.42904 * 113.60948 * 220.01839 * 18 17 4 21 21 C 1.53778 * 113.61449 * 156.43776 * 4 2 1 22 22 H 0.96995 * 120.00004 * 175.00543 * 1 2 3 23 23 H 0.97002 * 120.00048 * 355.01261 * 1 2 3 24 24 H 0.97000 * 120.00326 * 246.33477 * 5 4 2 25 25 H 1.08004 * 120.46514 * 359.97438 * 9 8 6 26 26 H 1.08007 * 120.75520 * 180.23929 * 10 9 8 27 27 H 1.08995 * 109.46769 * 60.03045 * 12 11 10 28 28 H 0.96701 * 113.99673 * 180.02562 * 13 12 11 29 29 H 1.48500 * 110.00203 * 60.00309 * 14 12 11 30 30 H 1.48502 * 110.00156 * 181.32108 * 14 12 11 31 31 H 1.08000 * 119.54932 * 179.97438 * 15 11 10 32 32 H 1.09001 * 113.62087 * 156.31908 * 17 4 2 33 33 H 1.09002 * 113.61802 * 25.41421 * 17 4 2 34 34 H 0.96695 * 113.99949 * 277.49159 * 20 18 17 35 35 H 1.08990 * 113.61568 * 334.65111 * 21 4 2 36 36 H 1.09002 * 113.68477 * 203.76081 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1014 -1.3050 0.0006 5 7 1.3282 -2.4085 -0.5746 6 6 1.0091 -2.3970 -1.8841 7 8 1.4388 -1.5195 -2.6064 8 6 0.1345 -3.4545 -2.4427 9 6 -0.1961 -3.4339 -3.7954 10 6 -1.0109 -4.4332 -4.3048 11 6 -1.4753 -5.4120 -3.4407 12 6 -2.3689 -6.5140 -3.9489 13 8 -3.5614 -5.9466 -4.4947 14 14 -2.8105 -7.6536 -2.5428 15 6 -1.1104 -5.3672 -2.1043 16 7 -0.3314 -4.4109 -1.6486 17 6 2.7469 -1.6452 1.3542 18 6 3.9838 -0.8701 0.8700 19 1 3.9553 0.1931 1.1082 20 8 5.2221 -1.4863 1.2292 21 6 3.5279 -1.1929 -0.5627 22 1 -0.4850 -0.8368 -0.0731 23 1 -0.4850 0.8369 0.0730 24 1 1.0461 -3.1475 -0.0132 25 1 0.1801 -2.6527 -4.4392 26 1 -1.2813 -4.4460 -5.3503 27 1 -1.8472 -7.0770 -4.7227 28 1 -4.1848 -6.5997 -4.8413 29 1 -3.5224 -6.8980 -1.4810 30 1 -3.6655 -8.7626 -3.0372 31 1 -1.4709 -6.1281 -1.4279 32 1 2.9274 -2.7107 1.4965 33 1 2.2471 -1.1822 2.2050 34 1 5.5141 -1.2870 2.1292 35 1 3.6584 -0.3650 -1.2594 36 1 3.9229 -2.1341 -0.9450 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13287726.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:02 Heat of formation + Delta-G solvation = -72.219994 kcal Electronic energy + Delta-G solvation = -23691.801031 eV Core-core repulsion = 19951.109797 eV Total energy + Delta-G solvation = -3740.691233 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.109 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.40014 -41.58777 -39.79384 -38.86732 -38.10627 -36.39657 -34.88480 -34.34276 -33.40308 -33.03217 -28.25671 -27.06477 -26.30929 -25.08246 -23.92662 -22.82347 -21.79549 -20.41942 -19.49485 -19.08868 -18.79296 -18.36087 -18.02725 -17.59319 -17.00028 -16.65820 -16.34056 -16.17916 -16.02608 -15.66477 -15.50920 -15.14319 -14.68326 -14.58085 -14.40810 -14.15398 -14.09471 -13.76255 -13.54314 -13.14530 -12.68019 -12.51134 -12.20080 -11.79826 -11.44721 -11.28638 -11.16371 -10.97080 -10.84926 -10.70907 -10.66817 -10.36398 -10.17011 -5.17865 -0.64794 0.00267 1.00722 1.39247 1.41195 1.49729 1.75320 1.76531 2.33944 2.57089 2.80326 3.04983 3.15855 3.24694 3.44767 3.47456 3.56759 3.65280 3.66377 3.80345 3.83292 4.10166 4.15243 4.20653 4.46811 4.47964 4.60615 4.77732 4.80344 4.89625 4.95287 5.07465 5.23548 5.29113 5.73263 6.13378 6.17644 6.26014 6.50507 6.68480 6.96650 7.18632 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.846 5.846 2 C 0.541 3.459 3 O -0.527 6.527 4 C 0.125 3.875 5 N -0.701 5.701 6 C 0.572 3.428 7 O -0.510 6.510 8 C 0.076 3.924 9 C -0.105 4.105 10 C -0.052 4.052 11 C -0.100 4.100 12 C -0.077 4.077 13 O -0.535 6.535 14 Si 0.682 3.318 15 C 0.107 3.893 16 N -0.451 5.451 17 C -0.153 4.153 18 C 0.082 3.918 19 H 0.100 0.900 20 O -0.555 6.555 21 C -0.104 4.104 22 H 0.401 0.599 23 H 0.406 0.594 24 H 0.418 0.582 25 H 0.153 0.847 26 H 0.147 0.853 27 H 0.085 0.915 28 H 0.385 0.615 29 H -0.249 1.249 30 H -0.255 1.255 31 H 0.166 0.834 32 H 0.112 0.888 33 H 0.084 0.916 34 H 0.382 0.618 35 H 0.093 0.907 36 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.914 -7.002 1.893 7.817 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.409 5.409 2 C 0.323 3.677 3 O -0.402 6.402 4 C 0.034 3.966 5 N -0.357 5.357 6 C 0.357 3.643 7 O -0.383 6.383 8 C -0.062 4.062 9 C -0.126 4.126 10 C -0.078 4.078 11 C -0.102 4.102 12 C -0.187 4.187 13 O -0.343 6.343 14 Si 0.582 3.418 15 C -0.053 4.053 16 N -0.162 5.162 17 C -0.191 4.191 18 C 0.023 3.977 19 H 0.118 0.882 20 O -0.360 6.360 21 C -0.142 4.142 22 H 0.229 0.771 23 H 0.237 0.763 24 H 0.256 0.744 25 H 0.171 0.829 26 H 0.165 0.835 27 H 0.103 0.897 28 H 0.234 0.766 29 H -0.174 1.174 30 H -0.180 1.180 31 H 0.182 0.818 32 H 0.130 0.870 33 H 0.103 0.897 34 H 0.229 0.771 35 H 0.112 0.888 36 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -2.191 -5.721 2.316 6.549 hybrid contribution -1.967 -0.275 -1.049 2.246 sum -4.158 -5.996 1.267 7.406 Atomic orbital electron populations 1.43724 1.07060 1.13262 1.76886 1.19910 0.82850 0.89918 0.75023 1.90781 1.68146 1.32192 1.49036 1.21609 0.91468 0.85467 0.98009 1.45773 1.55968 1.24231 1.09708 1.17965 0.79927 0.84283 0.82125 1.90874 1.52196 1.36568 1.58640 1.21044 0.98626 0.94896 0.91617 1.22214 0.96059 0.98988 0.95322 1.21541 0.93346 0.91811 1.01054 1.20558 0.97673 0.97096 0.94870 1.24736 0.87684 0.99314 1.06937 1.86570 1.30301 1.37031 1.80373 0.95105 0.89305 0.78648 0.78717 1.22556 0.94319 0.95794 0.92630 1.67522 1.08873 1.01650 1.38180 1.23982 0.97341 1.03717 0.94083 1.23250 0.82254 0.96509 0.95732 0.88209 1.86530 1.38690 1.74406 1.36363 1.23230 0.89848 1.04610 0.96557 0.77064 0.76293 0.74428 0.82897 0.83497 0.89687 0.76616 1.17380 1.17968 0.81752 0.86986 0.89717 0.77074 0.88848 0.87923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 -0.01 8.77 31.22 0.27 0.27 16 2 C 0.54 1.53 6.68 -10.98 -0.07 1.46 16 3 O -0.53 -3.37 16.07 5.56 0.09 -3.28 16 4 C 0.12 0.11 1.11 -132.16 -0.15 -0.04 16 5 N -0.70 0.26 4.42 -48.76 -0.22 0.04 16 6 C 0.57 1.09 7.21 -12.18 -0.09 1.00 16 7 O -0.51 -2.62 15.36 5.36 0.08 -2.54 16 8 C 0.08 0.07 6.75 -83.01 -0.56 -0.49 16 9 C -0.11 -0.04 9.63 -39.06 -0.38 -0.42 16 10 C -0.05 0.03 9.76 -39.31 -0.38 -0.35 16 11 C -0.10 0.11 5.44 -104.36 -0.57 -0.46 16 12 C -0.08 0.20 2.82 36.01 0.10 0.30 16 13 O -0.53 0.66 12.75 -35.23 -0.45 0.21 16 14 Si 0.68 -2.26 29.82 -169.99 -5.07 -7.32 16 15 C 0.11 -0.13 9.84 -17.56 -0.17 -0.30 16 16 N -0.45 0.06 9.55 -9.80 -0.09 -0.03 16 17 C -0.15 0.18 7.21 -25.92 -0.19 -0.01 16 18 C 0.08 0.08 4.80 -25.92 -0.12 -0.04 16 19 H 0.10 0.16 7.32 -51.93 -0.38 -0.22 16 20 O -0.55 -0.55 13.67 -35.23 -0.48 -1.04 16 21 C -0.10 -0.26 6.16 -25.92 -0.16 -0.42 16 22 H 0.40 -0.66 7.88 -40.82 -0.32 -0.98 16 23 H 0.41 -0.37 8.93 -40.82 -0.36 -0.73 16 24 H 0.42 -0.97 8.04 -40.82 -0.33 -1.30 16 25 H 0.15 0.02 7.64 -52.48 -0.40 -0.38 16 26 H 0.15 -0.30 8.06 -52.48 -0.42 -0.73 16 27 H 0.09 -0.37 7.96 -51.93 -0.41 -0.78 16 28 H 0.39 -1.94 8.74 45.56 0.40 -1.54 16 29 H -0.25 0.08 7.11 56.52 0.40 0.48 16 30 H -0.26 0.27 7.11 56.52 0.40 0.67 16 31 H 0.17 -0.59 4.89 -52.49 -0.26 -0.85 16 32 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.08 -0.18 8.10 -51.93 -0.42 -0.60 16 34 H 0.38 -1.25 9.12 45.56 0.42 -0.84 16 35 H 0.09 0.43 7.85 -51.93 -0.41 0.03 16 36 H 0.10 0.27 8.14 -51.93 -0.42 -0.16 16 LS Contribution 312.88 15.07 4.72 4.72 Total: 0.00 -10.52 312.88 -6.83 -17.36 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -2.95 Total: -8.60 kcal Atomic # 6 Polarization: 2.97 SS G_CDS: -2.74 Total: 0.23 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.04 Total: 0.28 kcal Atomic # 8 Polarization: -5.89 SS G_CDS: -0.76 Total: -6.65 kcal Atomic # 14 Polarization: -2.26 SS G_CDS: -5.07 Total: -7.32 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -10.52 -6.83 -17.36 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13287726.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.865 kcal (2) G-P(sol) polarization free energy of solvation -10.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.388 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.832 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.355 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds