Wall clock time and date at job start Sun Mar 7 2021 04:59:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34780 * 1 3 3 O 1.21281 * 119.99800 * 2 1 4 4 C 1.50698 * 120.00362 * 179.97438 * 2 1 3 5 5 N 1.46503 * 112.84446 * 25.23982 * 4 2 1 6 6 C 1.34783 * 119.99704 * 66.34326 * 5 4 2 7 7 O 1.21510 * 120.00079 * 5.00788 * 6 5 4 8 8 C 1.48166 * 119.99619 * 185.00301 * 6 5 4 9 9 C 1.39266 * 119.72250 * 179.72969 * 8 6 5 10 10 C 1.38628 * 119.06225 * 179.73345 * 9 8 6 11 11 C 1.38580 * 118.49022 * 0.52449 * 10 9 8 12 12 C 1.50701 * 120.32578 * 179.70645 * 11 10 9 13 13 O 1.42896 * 109.47272 * 300.02739 * 12 11 10 14 14 Si 1.86301 * 109.46989 * 180.02562 * 12 11 10 15 15 C 1.38606 * 119.34758 * 359.73805 * 11 10 9 16 16 N 1.31492 * 120.90425 * 359.97438 * 15 11 10 17 17 C 1.53774 * 113.69259 * 253.97829 * 4 2 1 18 18 C 1.53787 * 87.07974 * 270.87153 * 17 4 2 19 19 H 1.08998 * 113.68952 * 89.12521 * 18 17 4 20 20 O 1.42904 * 113.60948 * 220.01839 * 18 17 4 21 21 C 1.53778 * 113.61449 * 156.43776 * 4 2 1 22 22 H 0.96995 * 120.00004 * 175.00543 * 1 2 3 23 23 H 0.97002 * 120.00048 * 355.01261 * 1 2 3 24 24 H 0.97000 * 120.00326 * 246.33477 * 5 4 2 25 25 H 1.08004 * 120.46514 * 359.97438 * 9 8 6 26 26 H 1.08007 * 120.75520 * 180.23929 * 10 9 8 27 27 H 1.08995 * 109.46769 * 60.03045 * 12 11 10 28 28 H 0.96701 * 113.99673 * 180.02562 * 13 12 11 29 29 H 1.48500 * 110.00203 * 60.00309 * 14 12 11 30 30 H 1.48502 * 110.00156 * 181.32108 * 14 12 11 31 31 H 1.08000 * 119.54932 * 179.97438 * 15 11 10 32 32 H 1.09001 * 113.62087 * 156.31908 * 17 4 2 33 33 H 1.09002 * 113.61802 * 25.41421 * 17 4 2 34 34 H 0.96695 * 113.99949 * 277.49159 * 20 18 17 35 35 H 1.08990 * 113.61568 * 334.65111 * 21 4 2 36 36 H 1.09002 * 113.68477 * 203.76081 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1014 -1.3050 0.0006 5 7 1.3282 -2.4085 -0.5746 6 6 1.0091 -2.3970 -1.8841 7 8 1.4388 -1.5195 -2.6064 8 6 0.1345 -3.4545 -2.4427 9 6 -0.1961 -3.4339 -3.7954 10 6 -1.0109 -4.4332 -4.3048 11 6 -1.4753 -5.4120 -3.4407 12 6 -2.3689 -6.5140 -3.9489 13 8 -3.5614 -5.9466 -4.4947 14 14 -2.8105 -7.6536 -2.5428 15 6 -1.1104 -5.3672 -2.1043 16 7 -0.3314 -4.4109 -1.6486 17 6 2.7469 -1.6452 1.3542 18 6 3.9838 -0.8701 0.8700 19 1 3.9553 0.1931 1.1082 20 8 5.2221 -1.4863 1.2292 21 6 3.5279 -1.1929 -0.5627 22 1 -0.4850 -0.8368 -0.0731 23 1 -0.4850 0.8369 0.0730 24 1 1.0461 -3.1475 -0.0132 25 1 0.1801 -2.6527 -4.4392 26 1 -1.2813 -4.4460 -5.3503 27 1 -1.8472 -7.0770 -4.7227 28 1 -4.1848 -6.5997 -4.8413 29 1 -3.5224 -6.8980 -1.4810 30 1 -3.6655 -8.7626 -3.0372 31 1 -1.4709 -6.1281 -1.4279 32 1 2.9274 -2.7107 1.4965 33 1 2.2471 -1.1822 2.2050 34 1 5.5141 -1.2870 2.1292 35 1 3.6584 -0.3650 -1.2594 36 1 3.9229 -2.1341 -0.9450 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14243910_13287726.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:01 Heat of formation + Delta-G solvation = -82.640897 kcal Electronic energy + Delta-G solvation = -23692.252915 eV Core-core repulsion = 19951.109797 eV Total energy + Delta-G solvation = -3741.143117 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.109 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.50791 -41.58345 -39.94123 -39.01727 -37.95331 -36.51221 -35.00450 -34.38403 -33.42694 -32.98357 -28.21929 -27.13286 -26.36138 -25.01282 -23.93476 -22.88433 -21.83877 -20.56125 -19.54194 -19.14566 -18.63389 -18.44357 -17.99454 -17.68480 -16.93110 -16.71141 -16.38059 -16.28902 -16.15906 -15.59626 -15.51806 -15.29192 -14.74532 -14.61780 -14.35576 -14.06810 -13.95773 -13.76275 -13.57126 -13.33635 -12.67833 -12.55641 -12.11614 -11.90454 -11.62115 -11.38573 -11.09157 -11.00797 -10.87543 -10.81671 -10.58105 -10.41091 -10.17051 -4.91701 -0.63484 0.06747 1.22681 1.24402 1.42960 1.62100 1.68294 1.97064 2.24705 2.59674 2.84015 3.11044 3.21083 3.25282 3.42272 3.57418 3.58232 3.63884 3.77141 3.80930 3.88632 4.12456 4.18593 4.38815 4.53915 4.57472 4.60020 4.75331 4.80955 4.83149 4.90097 4.99354 5.16700 5.35819 5.66175 6.09682 6.18929 6.52630 6.56225 6.84781 6.89873 7.05827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.832 5.832 2 C 0.535 3.465 3 O -0.570 6.570 4 C 0.127 3.873 5 N -0.684 5.684 6 C 0.573 3.427 7 O -0.549 6.549 8 C 0.063 3.937 9 C -0.114 4.114 10 C -0.055 4.055 11 C -0.101 4.101 12 C -0.084 4.084 13 O -0.557 6.557 14 Si 0.763 3.237 15 C 0.103 3.897 16 N -0.451 5.451 17 C -0.131 4.131 18 C 0.084 3.916 19 H 0.089 0.911 20 O -0.569 6.569 21 C -0.114 4.114 22 H 0.410 0.590 23 H 0.411 0.589 24 H 0.430 0.570 25 H 0.148 0.852 26 H 0.159 0.841 27 H 0.108 0.892 28 H 0.400 0.600 29 H -0.290 1.290 30 H -0.285 1.285 31 H 0.188 0.812 32 H 0.132 0.868 33 H 0.101 0.899 34 H 0.400 0.600 35 H 0.062 0.938 36 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.668 -8.832 2.655 9.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.395 5.395 2 C 0.318 3.682 3 O -0.448 6.448 4 C 0.036 3.964 5 N -0.339 5.339 6 C 0.358 3.642 7 O -0.425 6.425 8 C -0.074 4.074 9 C -0.135 4.135 10 C -0.081 4.081 11 C -0.103 4.103 12 C -0.193 4.193 13 O -0.368 6.368 14 Si 0.667 3.333 15 C -0.057 4.057 16 N -0.162 5.162 17 C -0.169 4.169 18 C 0.024 3.976 19 H 0.107 0.893 20 O -0.377 6.377 21 C -0.153 4.153 22 H 0.241 0.759 23 H 0.243 0.757 24 H 0.270 0.730 25 H 0.166 0.834 26 H 0.177 0.823 27 H 0.126 0.874 28 H 0.251 0.749 29 H -0.217 1.217 30 H -0.211 1.211 31 H 0.204 0.796 32 H 0.150 0.850 33 H 0.120 0.880 34 H 0.250 0.750 35 H 0.081 0.919 36 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -2.966 -7.591 3.099 8.719 hybrid contribution -1.808 0.250 -1.323 2.254 sum -4.774 -7.341 1.777 8.936 Atomic orbital electron populations 1.43640 1.06333 1.14115 1.75416 1.20244 0.83527 0.90021 0.74428 1.90758 1.69086 1.33711 1.51231 1.21499 0.90510 0.85118 0.99253 1.45623 1.55065 1.24093 1.09155 1.18175 0.79595 0.83986 0.82404 1.90859 1.53821 1.38197 1.59665 1.20906 0.99318 0.95262 0.91940 1.22263 0.96569 0.99402 0.95286 1.21717 0.92955 0.91565 1.01832 1.20812 0.97425 0.97216 0.94884 1.24943 0.87450 0.98772 1.08138 1.86525 1.31048 1.38503 1.80682 0.94211 0.87540 0.75695 0.75815 1.22966 0.93777 0.95851 0.93134 1.67514 1.09065 1.01624 1.37964 1.23921 0.95262 1.04617 0.93127 1.23109 0.83330 0.96392 0.94754 0.89288 1.86482 1.38727 1.74413 1.38111 1.23223 0.91657 1.03252 0.97129 0.75924 0.75703 0.72950 0.83449 0.82300 0.87395 0.74856 1.21675 1.21137 0.79571 0.85038 0.88004 0.74960 0.91949 0.88198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 -0.41 8.77 -173.53 -1.52 -1.93 16 2 C 0.53 3.64 6.68 87.66 0.59 4.23 16 3 O -0.57 -8.49 16.07 -3.03 -0.05 -8.54 16 4 C 0.13 0.30 1.11 3.38 0.00 0.31 16 5 N -0.68 0.39 4.42 -426.47 -1.89 -1.49 16 6 C 0.57 2.76 7.21 86.88 0.63 3.38 16 7 O -0.55 -6.82 15.36 -3.75 -0.06 -6.88 16 8 C 0.06 0.14 6.75 41.89 0.28 0.42 16 9 C -0.11 -0.18 9.63 22.61 0.22 0.04 16 10 C -0.06 0.08 9.76 22.44 0.22 0.30 16 11 C -0.10 0.31 5.44 -19.69 -0.11 0.21 16 12 C -0.08 0.56 2.82 71.24 0.20 0.76 16 13 O -0.56 1.96 12.75 -148.98 -1.90 0.06 16 14 Si 0.76 -5.94 29.82 68.60 2.05 -3.89 16 15 C 0.10 -0.35 9.84 84.83 0.83 0.48 16 16 N -0.45 0.37 9.55 -184.91 -1.77 -1.39 16 17 C -0.13 0.41 7.21 31.12 0.22 0.64 16 18 C 0.08 0.23 4.80 31.12 0.15 0.38 16 19 H 0.09 0.43 7.32 -2.39 -0.02 0.41 16 20 O -0.57 -1.17 13.67 -148.98 -2.04 -3.21 16 21 C -0.11 -0.79 6.16 31.12 0.19 -0.59 16 22 H 0.41 -1.39 7.88 -92.71 -0.73 -2.12 16 23 H 0.41 -0.53 8.93 -92.71 -0.83 -1.35 16 24 H 0.43 -2.38 8.04 -92.71 -0.75 -3.12 16 25 H 0.15 0.31 7.64 -2.91 -0.02 0.29 16 26 H 0.16 -0.72 8.06 -2.91 -0.02 -0.75 16 27 H 0.11 -1.18 7.96 -2.39 -0.02 -1.20 16 28 H 0.40 -4.45 8.74 -74.06 -0.65 -5.09 16 29 H -0.29 0.29 7.11 99.48 0.71 1.00 16 30 H -0.28 0.80 7.11 99.48 0.71 1.50 16 31 H 0.19 -1.63 4.89 -2.91 -0.01 -1.65 16 32 H 0.13 -0.88 8.14 -2.39 -0.02 -0.90 16 33 H 0.10 -0.60 8.10 -2.39 -0.02 -0.62 16 34 H 0.40 -2.79 9.12 -74.06 -0.68 -3.46 16 35 H 0.06 0.81 7.85 -2.39 -0.02 0.79 16 36 H 0.10 0.69 8.14 -2.39 -0.02 0.67 16 Total: 0.00 -26.20 312.88 -6.13 -32.33 By element: Atomic # 1 Polarization: -13.23 SS G_CDS: -2.39 Total: -15.62 kcal Atomic # 6 Polarization: 7.12 SS G_CDS: 3.43 Total: 10.55 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -5.17 Total: -4.82 kcal Atomic # 8 Polarization: -14.51 SS G_CDS: -4.04 Total: -18.56 kcal Atomic # 14 Polarization: -5.94 SS G_CDS: 2.05 Total: -3.89 kcal Total: -26.20 -6.13 -32.33 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13287726.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.308 kcal (2) G-P(sol) polarization free energy of solvation -26.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.513 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.128 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.332 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds