Wall clock time and date at job start Sun Mar 7 2021 04:59:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.34660 * 124.85035 * 2 1 4 4 C 1.36765 * 108.39333 * 180.02562 * 3 2 1 5 5 C 1.47267 * 126.93738 * 179.97438 * 4 3 2 6 6 O 1.21624 * 120.00002 * 180.02562 * 5 4 3 7 7 N 1.34773 * 120.00049 * 0.02562 * 5 4 3 8 8 C 1.46500 * 119.99851 * 175.03371 * 7 5 4 9 9 C 1.50699 * 112.90742 * 54.31125 * 8 7 5 10 10 N 1.34773 * 120.00275 * 45.66872 * 9 8 7 11 11 O 1.21283 * 119.99603 * 225.67493 * 9 8 7 12 12 C 1.53958 * 113.61603 * 282.98017 * 8 7 5 13 13 C 1.53778 * 87.11019 * 270.84026 * 12 8 7 14 14 H 1.08998 * 113.61784 * 220.08555 * 13 12 8 15 15 O 1.42907 * 113.61229 * 89.18994 * 13 12 8 16 16 C 1.53781 * 87.08527 * 334.63825 * 13 12 8 17 17 C 1.46678 * 106.11955 * 0.26024 * 4 3 2 18 18 C 1.34491 * 106.33429 * 359.56942 * 17 4 3 19 19 C 1.50694 * 125.57462 * 180.14769 * 18 17 4 20 20 O 1.42904 * 109.47038 * 150.33731 * 19 18 17 21 21 Si 1.86302 * 109.47336 * 30.33603 * 19 18 17 22 22 H 1.09003 * 109.46750 * 89.97762 * 1 2 3 23 23 H 1.09001 * 109.47357 * 209.97307 * 1 2 3 24 24 H 1.08993 * 109.47347 * 329.97772 * 1 2 3 25 25 H 1.07999 * 125.80181 * 359.97438 * 3 2 1 26 26 H 0.96996 * 120.00358 * 355.04038 * 7 5 4 27 27 H 0.97005 * 119.99997 * 5.00801 * 10 9 8 28 28 H 0.97002 * 120.00011 * 185.00553 * 10 9 8 29 29 H 1.08999 * 113.53347 * 156.29204 * 12 8 7 30 30 H 1.08993 * 113.74187 * 25.42549 * 12 8 7 31 31 H 0.96693 * 114.00404 * 82.49842 * 15 13 12 32 32 H 1.09002 * 113.61363 * 139.97966 * 16 13 12 33 33 H 1.08991 * 113.61366 * 270.79984 * 16 13 12 34 34 H 1.08000 * 126.83744 * 179.73886 * 17 4 3 35 35 H 1.09003 * 109.47054 * 270.33414 * 19 18 17 36 36 H 0.96697 * 113.99957 * 299.99459 * 20 19 18 37 37 H 1.48503 * 110.00039 * 180.02562 * 21 19 18 38 38 H 1.48508 * 109.99791 * 301.31849 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7176 -0.0006 5 6 4.7283 1.5958 -0.0013 6 8 5.8446 1.1129 -0.0023 7 7 4.5733 2.9346 -0.0009 8 6 5.7448 3.8076 0.1082 9 6 6.7913 3.5182 -0.9369 10 7 6.4291 3.3445 -2.2233 11 8 7.9595 3.4416 -0.6201 12 6 6.3091 3.9067 1.5371 13 6 5.3457 5.0858 1.7523 14 1 5.7808 5.9069 2.3219 15 8 4.0597 4.6933 2.2364 16 6 5.3921 5.2995 0.2301 17 6 3.5375 -0.7491 -0.0074 18 6 2.2447 -1.1198 -0.0006 19 6 1.7398 -2.5396 -0.0007 20 8 0.4811 -2.5976 0.6734 21 14 2.9652 -3.6346 0.8769 22 1 -0.3633 0.0004 -1.0277 23 1 -0.3634 -0.8902 0.5134 24 1 -0.3633 0.8897 0.5141 25 1 1.8767 2.1241 -0.0004 26 1 3.6862 3.3202 -0.0728 27 1 5.5057 3.4772 -2.4894 28 1 7.0917 3.0869 -2.8832 29 1 7.3609 4.1905 1.5709 30 1 6.0843 3.0401 2.1588 31 1 4.0242 4.5574 3.1931 32 1 4.4260 5.5567 -0.2043 33 1 6.1922 5.9651 -0.0932 34 1 4.3981 -1.4017 -0.0135 35 1 1.6177 -2.8817 -1.0284 36 1 0.5147 -2.3068 1.5950 37 1 2.4791 -5.0378 0.8830 38 1 4.2871 -3.5585 0.2043 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13287730.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:04 Heat of formation + Delta-G solvation = -58.664760 kcal Electronic energy + Delta-G solvation = -24797.247505 eV Core-core repulsion = 21029.832593 eV Total energy + Delta-G solvation = -3767.414913 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.125 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.55283 -41.90535 -39.37673 -39.00856 -37.92117 -36.03279 -34.49754 -33.98732 -33.54740 -31.32994 -27.90463 -27.00637 -26.87236 -26.04995 -23.79472 -22.25537 -21.04308 -20.83440 -20.11565 -19.13734 -18.86092 -17.99490 -17.72966 -17.36148 -17.01067 -16.81448 -16.58961 -15.84726 -15.55976 -15.50109 -15.40277 -15.25484 -15.17525 -14.80070 -14.40210 -14.08510 -13.83891 -13.62284 -13.48145 -13.39840 -13.11150 -13.02665 -12.45746 -12.20760 -11.97411 -11.76507 -11.14946 -10.91080 -10.79516 -10.72660 -10.47600 -9.92601 -9.57601 -9.23466 -5.02707 0.74786 1.02457 1.37588 1.62151 1.64610 1.84748 2.01745 2.20368 2.57851 2.70910 2.90054 3.10126 3.33657 3.48301 3.53850 3.66975 3.76319 3.79038 3.94687 4.15233 4.18894 4.31077 4.35700 4.45952 4.51637 4.55043 4.58731 4.79733 4.85921 4.92767 4.97877 5.06068 5.47890 5.66140 5.94337 5.95581 6.12606 6.27063 6.46012 6.53433 6.63611 7.42159 7.45364 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.423 5.423 3 C 0.054 3.946 4 C -0.225 4.225 5 C 0.590 3.410 6 O -0.527 6.527 7 N -0.702 5.702 8 C 0.136 3.864 9 C 0.538 3.462 10 N -0.849 5.849 11 O -0.531 6.531 12 C -0.154 4.154 13 C 0.082 3.918 14 H 0.079 0.921 15 O -0.550 6.550 16 C -0.123 4.123 17 C -0.136 4.136 18 C -0.020 4.020 19 C -0.042 4.042 20 O -0.542 6.542 21 Si 0.715 3.285 22 H 0.073 0.927 23 H 0.114 0.886 24 H 0.082 0.918 25 H 0.171 0.829 26 H 0.405 0.595 27 H 0.398 0.602 28 H 0.402 0.598 29 H 0.111 0.889 30 H 0.084 0.916 31 H 0.386 0.614 32 H 0.092 0.908 33 H 0.114 0.886 34 H 0.151 0.849 35 H 0.118 0.882 36 H 0.381 0.619 37 H -0.252 1.252 38 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.903 3.567 2.122 8.927 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 N -0.097 5.097 3 C -0.082 4.082 4 C -0.236 4.236 5 C 0.379 3.621 6 O -0.403 6.403 7 N -0.356 5.356 8 C 0.045 3.955 9 C 0.321 3.679 10 N -0.412 5.412 11 O -0.405 6.405 12 C -0.193 4.193 13 C 0.023 3.977 14 H 0.097 0.903 15 O -0.356 6.356 16 C -0.160 4.160 17 C -0.160 4.160 18 C -0.129 4.129 19 C -0.152 4.152 20 O -0.348 6.348 21 Si 0.614 3.386 22 H 0.091 0.909 23 H 0.132 0.868 24 H 0.101 0.899 25 H 0.189 0.811 26 H 0.241 0.759 27 H 0.226 0.774 28 H 0.233 0.767 29 H 0.129 0.871 30 H 0.103 0.897 31 H 0.234 0.766 32 H 0.110 0.890 33 H 0.132 0.868 34 H 0.169 0.831 35 H 0.135 0.865 36 H 0.229 0.771 37 H -0.176 1.176 38 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges -6.555 2.282 1.246 7.052 hybrid contribution -0.823 0.523 -0.587 1.139 sum -7.378 2.805 0.658 7.921 Atomic orbital electron populations 1.22577 0.76226 1.06096 1.04269 1.43489 1.07024 1.04837 1.54380 1.21953 0.90060 0.91841 1.04356 1.20187 0.91315 0.93739 1.18337 1.17461 0.88304 0.80975 0.75322 1.90859 1.25599 1.74805 1.49032 1.45415 1.08501 1.05073 1.76659 1.21369 0.86599 0.91907 0.95584 1.20230 0.89288 0.75167 0.83261 1.43734 1.14359 1.73169 1.09938 1.90743 1.19035 1.49851 1.80872 1.23965 1.01185 1.00051 0.94136 1.22641 0.84184 0.96046 0.94841 0.90267 1.86365 1.29738 1.91075 1.28395 1.23336 1.03966 0.92937 0.95811 1.21720 0.94961 0.93239 1.06066 1.20735 0.90540 0.89103 1.12557 1.24825 0.93354 0.94913 1.02129 1.86449 1.30033 1.89096 1.29200 0.94073 0.76833 0.77687 0.89982 0.90865 0.86787 0.89924 0.81146 0.75891 0.77405 0.76717 0.87071 0.89728 0.76594 0.88991 0.86760 0.83146 0.86498 0.77094 1.17625 1.17530 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.18 10.71 59.85 0.64 0.46 16 2 N -0.42 0.51 3.09 -119.90 -0.37 0.14 16 3 C 0.05 -0.06 10.83 -16.84 -0.18 -0.24 16 4 C -0.23 -0.42 6.29 -103.35 -0.65 -1.07 16 5 C 0.59 2.00 7.57 -12.59 -0.10 1.91 16 6 O -0.53 -4.23 15.80 5.26 0.08 -4.15 16 7 N -0.70 -0.02 4.57 -48.95 -0.22 -0.24 16 8 C 0.14 0.15 0.96 -132.06 -0.13 0.02 16 9 C 0.54 2.16 5.73 -10.99 -0.06 2.10 16 10 N -0.85 -0.76 8.82 31.22 0.28 -0.48 16 11 O -0.53 -4.46 16.73 5.55 0.09 -4.37 16 12 C -0.15 -0.21 7.01 -25.83 -0.18 -0.39 16 13 C 0.08 -0.14 5.28 -25.92 -0.14 -0.27 16 14 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 15 O -0.55 1.16 13.08 -35.23 -0.46 0.70 16 16 C -0.12 0.22 7.16 -25.92 -0.19 0.03 16 17 C -0.14 -0.31 9.50 -37.50 -0.36 -0.66 16 18 C -0.02 0.00 6.13 -81.87 -0.50 -0.50 16 19 C -0.04 0.05 2.98 36.00 0.11 0.15 16 20 O -0.54 1.15 9.95 -35.23 -0.35 0.80 16 21 Si 0.71 -0.78 31.31 -169.99 -5.32 -6.10 16 22 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 23 H 0.11 -0.46 4.94 -51.93 -0.26 -0.71 16 24 H 0.08 -0.45 8.13 -51.93 -0.42 -0.87 16 25 H 0.17 -0.74 7.46 -52.49 -0.39 -1.13 16 26 H 0.40 -1.02 7.57 -40.82 -0.31 -1.33 16 27 H 0.40 -0.72 8.75 -40.82 -0.36 -1.08 16 28 H 0.40 0.22 8.93 -40.82 -0.36 -0.15 16 29 H 0.11 0.27 7.40 -51.93 -0.38 -0.11 16 30 H 0.08 0.23 8.14 -51.93 -0.42 -0.19 16 31 H 0.39 -1.97 9.12 45.56 0.42 -1.56 16 32 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 33 H 0.11 -0.26 8.09 -51.93 -0.42 -0.68 16 34 H 0.15 0.46 6.68 -52.49 -0.35 0.11 16 35 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 36 H 0.38 -2.13 8.38 45.56 0.38 -1.75 16 37 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 38 H -0.25 -0.49 6.77 56.52 0.38 -0.11 16 LS Contribution 323.31 15.07 4.87 4.87 Total: 0.00 -12.46 323.31 -6.91 -19.37 By element: Atomic # 1 Polarization: -8.30 SS G_CDS: -3.78 Total: -12.07 kcal Atomic # 6 Polarization: 3.26 SS G_CDS: -1.73 Total: 1.53 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -0.32 Total: -0.59 kcal Atomic # 8 Polarization: -6.38 SS G_CDS: -0.64 Total: -7.02 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.32 Total: -6.10 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -12.46 -6.91 -19.37 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13287730.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.292 kcal (2) G-P(sol) polarization free energy of solvation -12.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.911 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.373 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds