Wall clock time and date at job start Sun Mar 7 2021 04:59:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38979 * 119.95196 * 2 1 4 4 O 1.35706 * 119.91524 * 0.02562 * 3 2 1 5 5 C 1.39027 * 120.17314 * 180.27474 * 3 2 1 6 6 C 1.50699 * 119.95344 * 179.72347 * 5 3 2 7 7 O 1.42897 * 109.47060 * 74.72921 * 6 5 3 8 8 Si 1.86302 * 109.46725 * 194.72525 * 6 5 3 9 9 C 1.37681 * 120.08781 * 359.44970 * 5 3 2 10 10 C 1.39758 * 119.90745 * 0.27255 * 9 5 3 11 11 C 1.47604 * 120.08271 * 180.02562 * 10 9 5 12 12 O 1.21589 * 119.99874 * 0.02562 * 11 10 9 13 13 N 1.34778 * 120.00049 * 180.02562 * 11 10 9 14 14 C 1.46496 * 120.00073 * 175.06152 * 13 11 10 15 15 C 1.50696 * 112.85261 * 67.33157 * 14 13 11 16 16 N 1.34780 * 119.99667 * 36.12364 * 15 14 13 17 17 O 1.21279 * 119.99988 * 216.12220 * 15 14 13 18 18 C 1.53783 * 113.61100 * 296.13653 * 14 13 11 19 19 C 1.53781 * 87.08262 * 270.88625 * 18 14 13 20 20 H 1.09004 * 113.61243 * 219.93781 * 19 18 14 21 21 O 1.42900 * 113.61685 * 89.11812 * 19 18 14 22 22 C 1.53777 * 113.61263 * 198.64143 * 14 13 11 23 23 C 1.37720 * 119.96123 * 179.72301 * 2 1 3 24 24 H 1.08999 * 109.46970 * 270.27221 * 1 2 3 25 25 H 1.08999 * 109.47122 * 30.27657 * 1 2 3 26 26 H 1.08999 * 109.46569 * 150.27153 * 1 2 3 27 27 H 0.96704 * 114.00086 * 270.24931 * 4 3 2 28 28 H 1.08997 * 109.47279 * 314.72667 * 6 5 3 29 29 H 0.96707 * 113.99945 * 180.02562 * 7 6 5 30 30 H 1.48496 * 110.00089 * 299.99731 * 8 6 5 31 31 H 1.48499 * 109.99855 * 61.32171 * 8 6 5 32 32 H 1.07996 * 120.04133 * 180.25225 * 9 5 3 33 33 H 0.97006 * 119.99515 * 355.05667 * 13 11 10 34 34 H 0.96993 * 120.00238 * 355.00620 * 16 15 14 35 35 H 0.97000 * 119.99731 * 175.00489 * 16 15 14 36 36 H 1.08995 * 113.61784 * 25.43285 * 18 14 13 37 37 H 1.09005 * 113.61409 * 156.34099 * 18 14 13 38 38 H 0.96697 * 114.00417 * 180.02562 * 21 19 18 39 39 H 1.08998 * 113.61463 * 203.65732 * 22 14 13 40 40 H 1.09000 * 113.61558 * 334.56501 * 22 14 13 41 41 H 1.08009 * 120.03662 * 359.97438 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2042 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5912 1.2095 -0.0058 6 6 4.3385 2.5181 -0.0120 7 8 4.2720 3.1109 1.2865 8 14 6.1198 2.2137 -0.4651 9 6 4.2860 0.0210 -0.0001 10 6 3.5918 -1.1920 0.0058 11 6 4.3329 -2.4685 0.0125 12 8 5.5488 -2.4656 0.0134 13 7 3.6618 -3.6373 0.0176 14 6 4.3932 -4.9025 -0.0850 15 6 5.2422 -5.1876 1.1270 16 7 4.8062 -4.8360 2.3529 17 8 6.3176 -5.7334 0.9993 18 6 5.1432 -5.0741 -1.4165 19 6 3.8570 -5.7115 -1.9683 20 1 4.0378 -6.5715 -2.6132 21 8 2.9513 -4.7675 -2.5432 22 6 3.5150 -6.0885 -0.5171 23 6 2.1948 -1.1931 0.0058 24 1 -0.3633 0.0049 1.0277 25 1 -0.3633 0.8875 -0.5181 26 1 -0.3632 -0.8924 -0.5096 27 1 1.3185 2.7163 -0.8827 28 1 3.8877 3.1905 -0.7419 29 1 4.7326 3.9584 1.3561 30 1 6.7458 1.2984 0.5225 31 1 6.2043 1.6267 -1.8266 32 1 5.3660 0.0260 -0.0004 33 1 2.6944 -3.6408 0.0893 34 1 3.9810 -4.3355 2.4491 35 1 5.3177 -5.0836 3.1390 36 1 5.4032 -4.1305 -1.8961 37 1 5.9833 -5.7663 -1.3585 38 1 2.1403 -5.1623 -2.8916 39 1 3.9100 -7.0578 -0.2132 40 1 2.4606 -5.9637 -0.2705 41 1 1.6547 -2.1285 0.0107 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13287732.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:07 Heat of formation + Delta-G solvation = -126.837172 kcal Electronic energy + Delta-G solvation = -28510.137152 eV Core-core repulsion = 24358.283640 eV Total energy + Delta-G solvation = -4151.853512 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.129 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.36939 -41.40863 -39.82021 -39.14356 -37.76539 -37.52934 -36.21891 -34.75443 -34.26640 -33.88049 -31.70453 -28.16413 -27.33826 -27.08881 -26.68582 -24.72639 -22.38737 -22.05931 -21.62327 -20.39365 -19.60004 -19.11809 -18.83385 -18.43459 -18.09584 -17.94402 -17.40532 -16.73508 -16.60233 -16.12051 -15.97500 -15.77624 -15.51735 -15.28635 -15.06709 -14.93611 -14.74445 -14.40624 -13.96804 -13.89928 -13.73644 -13.57100 -13.48526 -13.13453 -13.08269 -12.94568 -12.61465 -12.46242 -11.93473 -11.88874 -11.54472 -11.31168 -11.19995 -10.98995 -10.64650 -10.31262 -10.10930 -10.02561 -9.71282 -4.98682 -0.43391 0.00741 1.26092 1.46311 1.56255 1.68198 1.88077 2.02088 2.44020 2.57172 2.86914 2.96666 3.19099 3.27188 3.29389 3.43979 3.54946 3.59265 3.74735 3.85009 3.88632 4.06487 4.18637 4.23455 4.33434 4.43039 4.46571 4.47677 4.56539 4.59701 4.70248 4.76310 4.92710 5.00357 5.01916 5.03662 5.20548 5.26057 5.46091 5.80602 6.23647 6.34650 6.49098 6.49164 6.64053 7.05146 7.27159 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.117 4.117 3 C 0.163 3.837 4 O -0.481 6.481 5 C -0.106 4.106 6 C -0.059 4.059 7 O -0.538 6.538 8 Si 0.675 3.325 9 C -0.053 4.053 10 C -0.136 4.136 11 C 0.564 3.436 12 O -0.519 6.519 13 N -0.698 5.698 14 C 0.132 3.868 15 C 0.532 3.468 16 N -0.849 5.849 17 O -0.530 6.530 18 C -0.115 4.115 19 C 0.082 3.918 20 H 0.082 0.918 21 O -0.545 6.545 22 C -0.155 4.155 23 C -0.062 4.062 24 H 0.077 0.923 25 H 0.072 0.928 26 H 0.070 0.930 27 H 0.392 0.608 28 H 0.073 0.927 29 H 0.382 0.618 30 H -0.245 1.245 31 H -0.252 1.252 32 H 0.139 0.861 33 H 0.405 0.595 34 H 0.399 0.601 35 H 0.403 0.597 36 H 0.089 0.911 37 H 0.120 0.880 38 H 0.382 0.618 39 H 0.112 0.888 40 H 0.089 0.911 41 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.539 1.447 -2.174 7.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.118 4.118 3 C 0.117 3.883 4 O -0.292 6.292 5 C -0.107 4.107 6 C -0.170 4.170 7 O -0.345 6.345 8 Si 0.576 3.424 9 C -0.071 4.071 10 C -0.139 4.139 11 C 0.352 3.648 12 O -0.394 6.394 13 N -0.353 5.353 14 C 0.042 3.958 15 C 0.314 3.686 16 N -0.412 5.412 17 O -0.404 6.404 18 C -0.153 4.153 19 C 0.023 3.977 20 H 0.100 0.900 21 O -0.350 6.350 22 C -0.194 4.194 23 C -0.081 4.081 24 H 0.095 0.905 25 H 0.091 0.909 26 H 0.089 0.911 27 H 0.250 0.750 28 H 0.091 0.909 29 H 0.230 0.770 30 H -0.170 1.170 31 H -0.176 1.176 32 H 0.156 0.844 33 H 0.242 0.758 34 H 0.227 0.773 35 H 0.234 0.766 36 H 0.108 0.892 37 H 0.138 0.862 38 H 0.229 0.771 39 H 0.130 0.870 40 H 0.108 0.892 41 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -5.218 0.306 -1.786 5.524 hybrid contribution -1.760 -0.266 -0.118 1.784 sum -6.978 0.040 -1.904 7.233 Atomic orbital electron populations 1.20691 0.89459 1.03204 1.03171 1.20209 0.97395 0.91974 1.02196 1.18291 0.88582 0.85367 0.96025 1.84819 1.75526 1.35650 1.33175 1.19668 0.93170 0.93971 1.03878 1.24446 1.09709 0.93524 0.89305 1.86534 1.79228 1.40258 1.28439 0.95464 0.78207 0.88187 0.80576 1.20983 1.00254 0.90566 0.95297 1.19690 0.93547 0.92938 1.07721 1.18155 0.87286 0.83382 0.75978 1.90870 1.13209 1.87267 1.48096 1.45416 1.10327 1.03714 1.75807 1.21439 0.94524 0.85677 0.94180 1.20386 0.85941 0.77577 0.84646 1.43771 1.29232 1.59772 1.08400 1.90761 1.20879 1.42905 1.85886 1.23323 0.96343 1.03815 0.91863 1.22694 0.91051 0.91980 0.92004 0.90032 1.86529 1.33261 1.35802 1.79399 1.23934 1.00264 0.97142 0.98025 1.21066 0.92323 0.97888 0.96830 0.90479 0.90940 0.91113 0.75006 0.90919 0.77043 1.16967 1.17634 0.84401 0.75756 0.77290 0.76582 0.89214 0.86168 0.77079 0.87007 0.89231 0.84826 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.24 9.78 36.01 0.35 0.59 16 2 C -0.12 -0.01 5.89 -104.54 -0.62 -0.63 16 3 C 0.16 0.25 6.66 -39.01 -0.26 -0.01 16 4 O -0.48 -0.11 11.85 -18.82 -0.22 -0.33 16 5 C -0.11 -0.29 5.30 -104.53 -0.55 -0.84 16 6 C -0.06 -0.04 2.36 36.00 0.08 0.04 16 7 O -0.54 -0.75 12.86 -35.23 -0.45 -1.20 16 8 Si 0.67 0.35 30.19 -169.99 -5.13 -4.78 16 9 C -0.05 -0.21 8.20 -39.22 -0.32 -0.53 16 10 C -0.14 -0.35 5.87 -104.96 -0.62 -0.97 16 11 C 0.56 2.02 7.24 -12.44 -0.09 1.93 16 12 O -0.52 -4.09 15.05 5.29 0.08 -4.01 16 13 N -0.70 0.02 4.02 -48.93 -0.20 -0.18 16 14 C 0.13 0.14 0.96 -132.16 -0.13 0.01 16 15 C 0.53 1.92 6.61 -10.99 -0.07 1.85 16 16 N -0.85 -0.43 8.83 31.22 0.28 -0.16 16 17 O -0.53 -4.10 16.74 5.56 0.09 -4.01 16 18 C -0.11 -0.26 6.66 -25.92 -0.17 -0.43 16 19 C 0.08 -0.11 5.28 -25.92 -0.14 -0.24 16 20 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 21 O -0.54 0.81 13.09 -35.23 -0.46 0.35 16 22 C -0.16 0.36 7.20 -25.92 -0.19 0.17 16 23 C -0.06 0.02 9.17 -39.22 -0.36 -0.34 16 24 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 25 H 0.07 -0.19 7.53 -51.93 -0.39 -0.58 16 26 H 0.07 -0.26 8.08 -51.93 -0.42 -0.68 16 27 H 0.39 -1.75 9.06 45.56 0.41 -1.34 16 28 H 0.07 -0.11 7.83 -51.93 -0.41 -0.52 16 29 H 0.38 -1.42 8.74 45.56 0.40 -1.02 16 30 H -0.24 -1.08 6.75 56.52 0.38 -0.70 16 31 H -0.25 -0.81 7.11 56.52 0.40 -0.40 16 32 H 0.14 0.76 4.47 -52.49 -0.23 0.53 16 33 H 0.41 -1.27 6.71 -40.82 -0.27 -1.55 16 34 H 0.40 -0.74 8.33 -40.82 -0.34 -1.08 16 35 H 0.40 -0.06 8.93 -40.82 -0.36 -0.43 16 36 H 0.09 0.43 7.38 -51.93 -0.38 0.04 16 37 H 0.12 0.34 7.35 -51.93 -0.38 -0.04 16 38 H 0.38 -2.20 9.12 45.56 0.42 -1.78 16 39 H 0.11 -0.27 8.10 -51.93 -0.42 -0.69 16 40 H 0.09 -0.40 8.10 -51.93 -0.42 -0.82 16 41 H 0.13 -0.48 6.41 -52.48 -0.34 -0.82 16 LS Contribution 346.08 15.07 5.22 5.22 Total: 0.00 -14.50 346.08 -7.09 -21.59 By element: Atomic # 1 Polarization: -9.87 SS G_CDS: -3.21 Total: -13.08 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: -3.08 Total: 0.59 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: 0.08 Total: -0.33 kcal Atomic # 8 Polarization: -8.23 SS G_CDS: -0.96 Total: -9.19 kcal Atomic # 14 Polarization: 0.35 SS G_CDS: -5.13 Total: -4.78 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -14.50 -7.09 -21.59 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13287732.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.250 kcal (2) G-P(sol) polarization free energy of solvation -14.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.588 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.837 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds