Wall clock time and date at job start Sun Mar 7 2021 04:59:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21287 * 120.00163 * 2 1 4 4 C 1.50699 * 119.99999 * 180.02562 * 2 1 3 5 5 N 1.46498 * 112.84928 * 323.38739 * 4 2 1 6 6 C 1.34777 * 120.00353 * 294.95390 * 5 4 2 7 7 O 1.21281 * 119.99657 * 4.47051 * 6 5 4 8 8 C 1.50702 * 120.00162 * 184.47362 * 6 5 4 9 9 C 1.50701 * 109.46949 * 179.97438 * 8 6 5 10 10 C 1.38272 * 119.93674 * 90.00015 * 9 8 6 11 11 C 1.38121 * 120.06809 * 179.97438 * 10 9 8 12 12 C 1.38824 * 119.93206 * 0.02791 * 11 10 9 13 13 N 1.40206 * 120.06786 * 179.97438 * 12 11 10 14 14 C 1.36565 * 125.66630 * 235.95650 * 13 12 11 15 15 C 1.34848 * 108.19861 * 179.97438 * 14 13 12 16 16 C 1.40938 * 107.47018 * 359.75110 * 15 14 13 17 17 C 1.34851 * 107.46692 * 0.41014 * 16 15 14 18 18 C 1.50700 * 125.90473 * 179.85270 * 17 16 15 19 19 O 1.42897 * 109.47411 * 217.10572 * 18 17 16 20 20 Si 1.86305 * 109.46760 * 337.10429 * 18 17 16 21 21 C 1.38828 * 119.87028 * 0.24625 * 12 11 10 22 22 C 1.38129 * 119.93070 * 359.47408 * 21 12 11 23 23 C 1.53788 * 113.61211 * 192.19695 * 4 2 1 24 24 C 1.54050 * 86.98041 * 219.97527 * 23 4 2 25 25 H 1.09006 * 113.69283 * 139.99391 * 24 23 4 26 26 O 1.42900 * 113.61849 * 270.88109 * 24 23 4 27 27 C 1.53775 * 113.61855 * 94.58832 * 4 2 1 28 28 H 0.96994 * 120.00091 * 185.21503 * 1 2 3 29 29 H 0.97006 * 119.99982 * 5.21369 * 1 2 3 30 30 H 0.97006 * 120.00150 * 114.94451 * 5 4 2 31 31 H 1.08998 * 109.47045 * 59.99584 * 8 6 5 32 32 H 1.08997 * 109.46940 * 299.99582 * 8 6 5 33 33 H 1.07999 * 119.96823 * 0.02562 * 10 9 8 34 34 H 1.07996 * 120.03192 * 179.97438 * 11 10 9 35 35 H 1.08005 * 125.90122 * 359.95769 * 14 13 12 36 36 H 1.08001 * 126.26470 * 179.97438 * 15 14 13 37 37 H 1.07999 * 126.27101 * 180.26792 * 16 15 14 38 38 H 1.09000 * 109.47115 * 97.10181 * 18 17 16 39 39 H 0.96700 * 113.99475 * 179.97438 * 19 18 17 40 40 H 1.48498 * 110.00156 * 299.99882 * 20 18 17 41 41 H 1.48503 * 109.99873 * 61.31948 * 20 18 17 42 42 H 1.07997 * 120.03413 * 179.75162 * 21 12 11 43 43 H 1.08000 * 119.96465 * 180.27829 * 22 21 12 44 44 H 1.08997 * 113.61760 * 334.47788 * 23 4 2 45 45 H 1.09002 * 113.61182 * 105.38426 * 23 4 2 46 46 H 0.96697 * 114.00292 * 277.49909 * 26 24 23 47 47 H 1.09002 * 113.61456 * 254.61305 * 27 4 2 48 48 H 1.09006 * 113.61403 * 25.43044 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0504 0.0000 4 6 2.1012 -1.3051 -0.0006 5 7 1.4472 -2.3399 0.8041 6 6 1.3331 -2.1846 2.1380 7 8 1.6983 -1.1536 2.6619 8 6 0.7517 -3.2921 2.9786 9 6 0.7361 -2.8696 4.4251 10 6 -0.3663 -2.2129 4.9402 11 6 -0.3838 -1.8249 6.2657 12 6 0.7072 -2.0943 7.0808 13 7 0.6928 -1.7012 8.4265 14 6 1.6250 -0.9103 9.0351 15 6 1.2683 -0.7563 10.3264 16 6 0.0704 -1.4723 10.5227 17 6 -0.2562 -2.0451 9.3464 18 6 -1.4633 -2.9100 9.0896 19 8 -1.1134 -3.9601 8.1858 20 14 -2.0538 -3.6449 10.6966 21 6 1.8150 -2.7487 6.5593 22 6 1.8242 -3.1394 5.2344 23 6 3.6020 -1.1500 0.2972 24 6 3.8440 -2.2196 -0.7848 25 1 4.7072 -2.0145 -1.4181 26 8 3.8307 -3.5568 -0.2811 27 6 2.5069 -1.7817 -1.4052 28 1 -0.4850 -0.8365 0.0763 29 1 -0.4850 0.8366 -0.0763 30 1 1.0961 -3.1369 0.3769 31 1 1.3609 -4.1894 2.8691 32 1 -0.2662 -3.5017 2.6499 33 1 -1.2150 -2.0039 4.3058 34 1 -1.2449 -1.3117 6.6673 35 1 2.4974 -0.4823 8.5637 36 1 1.8011 -0.1855 11.0726 37 1 -0.4834 -1.5501 11.4467 38 1 -2.2578 -2.3047 8.6532 39 1 -1.8440 -4.5576 7.9753 40 1 -0.9796 -4.4725 11.3017 41 1 -2.4510 -2.5636 11.6339 42 1 2.6668 -2.9560 7.1900 43 1 2.6839 -3.6525 4.8294 44 1 3.9995 -0.1688 0.0379 45 1 3.8834 -1.4703 1.3004 46 1 4.6690 -3.8380 0.1104 47 1 1.9048 -2.6114 -1.7756 48 1 2.6041 -0.9729 -2.1296 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14243910_13287746.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:59:11 Heat of formation + Delta-G solvation = -27.143663 kcal Electronic energy + Delta-G solvation = -34189.765682 eV Core-core repulsion = 29599.737827 eV Total energy + Delta-G solvation = -4590.027855 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.156 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.58069 -42.23730 -40.49280 -39.37710 -39.06073 -37.63867 -36.17560 -34.82426 -34.70213 -33.79697 -32.09214 -31.71122 -31.09931 -28.14181 -27.11559 -26.57175 -25.90291 -23.89600 -23.48722 -22.40130 -21.68660 -21.40248 -20.43295 -20.38034 -19.12060 -18.67441 -18.32738 -18.30469 -18.06534 -17.89401 -17.01958 -16.91772 -16.44681 -16.02928 -15.78732 -15.72147 -15.63089 -15.47178 -15.28244 -15.20810 -14.59189 -14.57001 -14.47503 -14.42727 -14.13276 -13.92231 -13.66062 -13.40182 -13.23404 -13.13877 -13.06698 -12.99984 -12.68990 -12.63766 -12.46622 -12.08062 -11.86986 -11.83421 -11.35524 -11.10069 -10.86519 -10.65317 -10.51958 -10.17184 -10.03809 -9.91098 -9.14442 -8.95108 -4.98168 0.09786 0.43096 1.09420 1.42010 1.51139 1.53951 1.71534 1.95159 2.03158 2.03837 2.17352 2.49916 2.74234 2.82658 3.22326 3.28636 3.39350 3.54456 3.57059 3.75012 3.77960 3.80508 3.91570 3.95180 4.12354 4.23976 4.25322 4.29932 4.37439 4.41207 4.45250 4.48766 4.49708 4.60894 4.67039 4.70742 4.78182 4.87386 4.96255 5.00098 5.25987 5.26602 5.30455 5.30921 5.44830 5.53009 5.79595 5.82919 6.00835 6.26753 6.27344 6.37335 6.47866 6.56085 6.61653 7.13040 7.27775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.849 5.849 2 C 0.533 3.467 3 O -0.531 6.531 4 C 0.134 3.866 5 N -0.705 5.705 6 C 0.514 3.486 7 O -0.513 6.513 8 C -0.099 4.099 9 C -0.065 4.065 10 C -0.089 4.089 11 C -0.098 4.098 12 C 0.141 3.859 13 N -0.389 5.389 14 C -0.003 4.003 15 C -0.188 4.188 16 C -0.200 4.200 17 C 0.036 3.964 18 C -0.048 4.048 19 O -0.543 6.543 20 Si 0.710 3.290 21 C -0.111 4.111 22 C -0.088 4.088 23 C -0.152 4.152 24 C 0.082 3.918 25 H 0.080 0.920 26 O -0.548 6.548 27 C -0.118 4.118 28 H 0.399 0.601 29 H 0.402 0.598 30 H 0.408 0.592 31 H 0.109 0.891 32 H 0.105 0.895 33 H 0.126 0.874 34 H 0.123 0.877 35 H 0.167 0.833 36 H 0.144 0.856 37 H 0.139 0.861 38 H 0.072 0.928 39 H 0.382 0.618 40 H -0.252 1.252 41 H -0.255 1.255 42 H 0.126 0.874 43 H 0.127 0.873 44 H 0.112 0.888 45 H 0.085 0.915 46 H 0.385 0.615 47 H 0.093 0.907 48 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.415 -7.157 -5.016 9.791 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.315 3.685 3 O -0.406 6.406 4 C 0.043 3.957 5 N -0.360 5.360 6 C 0.300 3.700 7 O -0.386 6.386 8 C -0.139 4.139 9 C -0.066 4.066 10 C -0.108 4.108 11 C -0.117 4.117 12 C 0.051 3.949 13 N -0.061 5.061 14 C -0.131 4.131 15 C -0.212 4.212 16 C -0.225 4.225 17 C -0.074 4.074 18 C -0.158 4.158 19 O -0.349 6.349 20 Si 0.609 3.391 21 C -0.130 4.130 22 C -0.107 4.107 23 C -0.191 4.191 24 C 0.023 3.977 25 H 0.098 0.902 26 O -0.354 6.354 27 C -0.156 4.156 28 H 0.227 0.773 29 H 0.233 0.767 30 H 0.244 0.756 31 H 0.127 0.873 32 H 0.124 0.876 33 H 0.144 0.856 34 H 0.141 0.859 35 H 0.184 0.816 36 H 0.161 0.839 37 H 0.156 0.844 38 H 0.089 0.911 39 H 0.229 0.771 40 H -0.177 1.177 41 H -0.180 1.180 42 H 0.144 0.856 43 H 0.145 0.855 44 H 0.130 0.870 45 H 0.103 0.897 46 H 0.234 0.766 47 H 0.111 0.889 48 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -3.465 -5.638 -4.255 7.867 hybrid contribution 0.262 0.105 -0.156 0.323 sum -3.202 -5.533 -4.411 7.767 Atomic orbital electron populations 1.43764 1.07258 1.12953 1.77250 1.20412 0.82729 0.90679 0.74677 1.90764 1.68206 1.32684 1.48927 1.21394 0.93689 0.86348 0.94237 1.45629 1.60850 1.22707 1.06829 1.20675 0.78685 0.88826 0.81840 1.90824 1.47401 1.28535 1.71866 1.20653 1.03802 0.97875 0.91588 1.19231 0.94543 0.99057 0.93725 1.20755 0.98070 0.97478 0.94449 1.20854 0.97694 0.99857 0.93321 1.17560 0.96246 0.99224 0.81871 1.41437 1.20264 1.38078 1.06345 1.22029 0.96643 1.00587 0.93856 1.20881 0.98581 1.05978 0.95804 1.20632 1.00158 1.05297 0.96388 1.19965 0.94321 1.03598 0.89486 1.24414 0.95255 0.90691 1.05401 1.86525 1.40265 1.41911 1.66172 0.95634 0.85587 0.83055 0.74779 1.20984 0.97916 0.98018 0.96099 1.20784 0.97681 0.99451 0.92751 1.23942 0.92499 1.01392 1.01237 1.22698 0.97726 0.82492 0.94833 0.90235 1.86383 1.40362 1.28181 1.80524 1.23298 0.96659 1.01992 0.93681 0.77329 0.76690 0.75580 0.87324 0.87630 0.85598 0.85934 0.81612 0.83857 0.84383 0.91055 0.77063 1.17667 1.17999 0.85600 0.85492 0.86979 0.89679 0.76637 0.88857 0.86704 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 0.58 8.83 31.22 0.28 0.85 16 2 C 0.53 1.41 6.47 -10.99 -0.07 1.34 16 3 O -0.53 -3.82 16.74 5.55 0.09 -3.73 16 4 C 0.13 -0.02 0.96 -132.16 -0.13 -0.15 16 5 N -0.70 1.56 4.10 -47.92 -0.20 1.36 16 6 C 0.51 0.03 7.32 -10.98 -0.08 -0.05 16 7 O -0.51 -2.58 14.81 5.56 0.08 -2.50 16 8 C -0.10 0.25 5.83 -29.03 -0.17 0.08 16 9 C -0.06 -0.03 4.37 -104.60 -0.46 -0.49 16 10 C -0.09 -0.08 9.69 -39.61 -0.38 -0.47 16 11 C -0.10 -0.24 8.53 -39.41 -0.34 -0.58 16 12 C 0.14 0.53 4.67 -83.59 -0.39 0.14 16 13 N -0.39 -1.81 2.84 -56.73 -0.16 -1.97 16 14 C 0.00 -0.01 11.21 -16.65 -0.19 -0.20 16 15 C -0.19 -0.78 10.86 -39.76 -0.43 -1.21 16 16 C -0.20 -0.93 9.40 -39.76 -0.37 -1.30 16 17 C 0.04 0.16 6.12 -81.68 -0.50 -0.34 16 18 C -0.05 -0.05 2.48 36.01 0.09 0.04 16 19 O -0.54 -0.30 10.84 -35.23 -0.38 -0.68 16 20 Si 0.71 -0.25 30.99 -169.99 -5.27 -5.52 16 21 C -0.11 -0.33 9.76 -39.40 -0.38 -0.71 16 22 C -0.09 -0.12 9.69 -39.61 -0.38 -0.51 16 23 C -0.15 -0.12 6.72 -25.77 -0.17 -0.29 16 24 C 0.08 -0.16 5.28 -25.78 -0.14 -0.30 16 25 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 26 O -0.55 1.30 13.09 -35.23 -0.46 0.84 16 27 C -0.12 0.27 7.19 -25.92 -0.19 0.08 16 28 H 0.40 -1.36 8.34 -40.82 -0.34 -1.70 16 29 H 0.40 -0.45 8.93 -40.82 -0.36 -0.81 16 30 H 0.41 -1.98 8.66 -40.82 -0.35 -2.33 16 31 H 0.11 -0.45 8.08 -51.93 -0.42 -0.87 16 32 H 0.11 -0.54 8.08 -51.93 -0.42 -0.96 16 33 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 34 H 0.12 0.24 8.06 -52.49 -0.42 -0.18 16 35 H 0.17 0.35 8.06 -52.48 -0.42 -0.08 16 36 H 0.14 0.31 8.06 -52.49 -0.42 -0.11 16 37 H 0.14 0.50 6.53 -52.49 -0.34 0.16 16 38 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 39 H 0.38 -1.73 8.74 45.56 0.40 -1.33 16 40 H -0.25 -0.89 7.11 56.52 0.40 -0.49 16 41 H -0.26 -0.51 6.96 56.52 0.39 -0.12 16 42 H 0.13 0.30 8.06 -52.49 -0.42 -0.12 16 43 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 44 H 0.11 0.24 7.35 -51.93 -0.38 -0.14 16 45 H 0.08 0.19 7.56 -51.93 -0.39 -0.20 16 46 H 0.39 -2.04 9.12 45.56 0.42 -1.63 16 47 H 0.09 -0.34 8.09 -51.93 -0.42 -0.76 16 48 H 0.11 -0.29 8.09 -51.93 -0.42 -0.71 16 LS Contribution 404.87 15.07 6.10 6.10 Total: 0.00 -14.47 404.87 -10.22 -24.69 By element: Atomic # 1 Polarization: -8.93 SS G_CDS: -5.62 Total: -14.55 kcal Atomic # 6 Polarization: -0.23 SS G_CDS: -4.68 Total: -4.91 kcal Atomic # 7 Polarization: 0.33 SS G_CDS: -0.08 Total: 0.25 kcal Atomic # 8 Polarization: -5.39 SS G_CDS: -0.67 Total: -6.06 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.27 Total: -5.52 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -14.47 -10.22 -24.69 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14243910_13287746.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.458 kcal (2) G-P(sol) polarization free energy of solvation -14.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.925 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.219 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.686 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.144 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds